Os09g0535400

From RiceWiki
Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0535400| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001189027.1 GI:297727184 GeneID:926751...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0535400

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001189027.1 GI:297727184 GeneID:9267513

Length

1290 bp

Definition

Oryza sativa Japonica Group Os09g0535400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21886226..21887515

Sequence Coding Region

21886226..21887515

Expression

GEO Profiles:Os09g0535400

Genome Context

<gbrowseImage1> name=NC_008402:21886226..21887515 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21886226..21887515 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttcttcacttgctgtcctcctgctcgtgatgcggctcgccgccgccatggccgcctctcccaaaagctacatatcaagaaccaccgagcagcaggtgatcgccaccgtcgcgcccgccgtggacgtcggccagagcgcgcagcctttcctcacctcgccgtctgggtcgtacgccgcgtacctccgccgcgccgtggacagctccgccggtggcccgggcgccgacgcgtgctacgtccaaatccagcaggctggcggcggcgccggcggtggtggcagcgtgtgggagtcggagtgcacccttgtcggcggcgccgacgcgtgcgacctggcgttctcgccggtggggctcgagctcttcgccggcgggcactctctctgggacaccgggatcgacgccgagccgggaacgctgagccttgacgacggcggcgacatgaggatcgtgagcaaggacggcgtgtcggtgtggcaggcgagcggcgagccgtggacggggcagcagtgcggcgcggccgcgccggtctcgccgtcgccgacgatggacgtgctcccgccgccgtcgaccacaaccacagcgaagcttctgacgccgccggcgtcgaccctcgccggcgccgggagctcggacctgtctttcggagaccagctcgcgccaccggttgacacgtcgctgcccgcctcgcccgaccagccaccggttgacactatgcctgaccagccattgctgccgccgccgccagctgacgcgacacccgccacgccggacttgccgctgccaccaccaccgccggccgacacgtaccctgtctctcctgaccagccgctgtactcgtcgccaccgccggctccgacggcatttgttcctcacacgccattgccacccgtcgacgtgcctgctctctccccgccattgccgcacggcaagacaccttccggcgcaccaggtggcatagcactcccgcctgctgcgcccgccggcggcggcatgccgcagcagcacggttcgccgcaccacctgccactgggagcgtcgccgccgccggaggccgccgcggtgccggacgcgctggcgccgagcgctggccatggcgcggcggcgggggggctcccgatcggggggcaggggcagcagcagggcgcgtttggacagcaccaggtgctgaacggcgcggggcagccattggaggacagctccggcgagcggccaagaggagcgcacgccgccgtcgtcgtcacctccggcttggtttctctactgattgcacttggatttggcttctaa</cdnaseq>

Protein Sequence

<aaseq>MSSSLAVLLLVMRLAAAMAASPKSYISRTTEQQVIATVAPAVDV GQSAQPFLTSPSGSYAAYLRRAVDSSAGGPGADACYVQIQQAGGGAGGGGSVWESECT LVGGADACDLAFSPVGLELFAGGHSLWDTGIDAEPGTLSLDDGGDMRIVSKDGVSVWQ ASGEPWTGQQCGAAAPVSPSPTMDVLPPPSTTTTAKLLTPPASTLAGAGSSDLSFGDQ LAPPVDTSLPASPDQPPVDTMPDQPLLPPPPADATPATPDLPLPPPPPADTYPVSPDQ PLYSSPPPAPTAFVPHTPLPPVDVPALSPPLPHGKTPSGAPGGIALPPAAPAGGGMPQ QHGSPHHLPLGASPPPEAAAVPDALAPSAGHGAAAGGLPIGGQGQQQGAFGQHQVLNG AGQPLEDSSGERPRGAHAAVVVTSGLVSLLIALGFGF</aaseq>

Gene Sequence

<dnaseqindica>1..1290#atgtcttcttcacttgctgtcctcctgctcgtgatgcggctcgccgccgccatggccgcctctcccaaaagctacatatcaagaaccaccgagcagcaggtgatcgccaccgtcgcgcccgccgtggacgtcggccagagcgcgcagcctttcctcacctcgccgtctgggtcgtacgccgcgtacctccgccgcgccgtggacagctccgccggtggcccgggcgccgacgcgtgctacgtccaaatccagcaggctggcggcggcgccggcggtggtggcagcgtgtgggagtcggagtgcacccttgtcggcggcgccgacgcgtgcgacctggcgttctcgccggtggggctcgagctcttcgccggcgggcactctctctgggacaccgggatcgacgccgagccgggaacgctgagccttgacgacggcggcgacatgaggatcgtgagcaaggacggcgtgtcggtgtggcaggcgagcggcgagccgtggacggggcagcagtgcggcgcggccgcgccggtctcgccgtcgccgacgatggacgtgctcccgccgccgtcgaccacaaccacagcgaagcttctgacgccgccggcgtcgaccctcgccggcgccgggagctcggacctgtctttcggagaccagctcgcgccaccggttgacacgtcgctgcccgcctcgcccgaccagccaccggttgacactatgcctgaccagccattgctgccgccgccgccagctgacgcgacacccgccacgccggacttgccgctgccaccaccaccgccggccgacacgtaccctgtctctcctgaccagccgctgtactcgtcgccaccgccggctccgacggcatttgttcctcacacgccattgccacccgtcgacgtgcctgctctctccccgccattgccgcacggcaagacaccttccggcgcaccaggtggcatagcactcccgcctgctgcgcccgccggcggcggcatgccgcagcagcacggttcgccgcaccacctgccactgggagcgtcgccgccgccggaggccgccgcggtgccggacgcgctggcgccgagcgctggccatggcgcggcggcgggggggctcccgatcggggggcaggggcagcagcagggcgcgtttggacagcaccaggtgctgaacggcgcggggcagccattggaggacagctccggcgagcggccaagaggagcgcacgccgccgtcgtcgtcacctccggcttggtttctctactgattgcacttggatttggcttctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0535400, RefSeq:Os09g0535400