Os05g0115800

From RiceWiki
Revision as of 20:03, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0115800

Description

Similar to MAP kinase phosphatase (Fragment)

Version

NM_001061002.1 GI:115461734 GeneID:4337619

Length

3164 bp

Definition

Oryza sativa Japonica Group Os05g0115800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:836474..839637

Sequence Coding Region

836909..836962,838290..839636

Expression

GEO Profiles:Os05g0115800

Genome Context

<gbrowseImage1> name=NC_008398:836474..839637 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:836474..839637 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cggatggcacctcactcaccttatgcgccgctgcatttagtacccaaaatgctgaacgaaccctcacctgctgccctggactctaggggtgcattcatcgttcatgtgctctcatcgatctatgtttgggttggaatgaagtgtgatcaagtaatggagaaggatgcaagagcagcggcgttccaggtggtgaggtatgagaaggtgcaggggcatatcaaagttgtcagggaaggaagtgaggtaccagaattttgggacgccttttcaagtgcacctgttaattcagacagcaatacaaagattagcaaggatcagattgattcagcatccaagactggcccggggaaccgtagggtggaatcttatgatgctgattttgagcttgtatacaaagcaatcactgggggtgttgtgccagcattctcttcttcaggtgctggtgatgagacccatcttccagcaagagaaagtacctggagttcactaaggcgcaagttcatctctaggtcgttagctcgagtctattcagattctgctttaatcagggacttggatccgcgggtggaccgagtacaacacctggctgcagaggcatcaacatcaccacctttcctatctccgagctctttgtcatcagattcaagcatcagttcaaagtatagttcagactcaccctcactgtcaccttcaactagctcgccaacatcacttggtctttcgcccgcttcatctaatttttcccacactttggtgccatcatctaggtccccccttcaccaatcatctaacgaggaaccttcaaaatctggcctggggtcaatacgctctccctccaagacctcttctatagcagaaagaagaggagggttttcatctctgaagttaccatcattccaaaaggatctagtattaccaccaagggtaccgaccagccttcgcagagaagaggaagtcacagataagagtaataataatagtgtaaaacagcttactggtgtgtgttgcccagagaaatgcactggcaatacttcaacagtgcacactaaaactggaataactgagcgtactgacagtatctcagaggcttgcggtaatttacaactattagtctaccgttggcccagcaaggaaaagctaactactttcactcgcaaggatcttgacccaaaatcagttttgatttttgttactcctgaagacagcagaagtgaagcagttaaaacggtacacatttgggtaggaggtgaatatgagagcagcaaatgtgttgacactgttgattggcagcaagttgttggtgatttttttcatctaaaggagctcggcaatactcttcctgttaaggttttcaaagagcatgaaacggagaatcttttggaagtgctgaatgctcgttaa</cdnaseq>

Protein Sequence

<aaseq>RMAPHSPYAPLHLVPKMLNEPSPAALDSRGAFIVHVLSSIYVWV GMKCDQVMEKDARAAAFQVVRYEKVQGHIKVVREGSEVPEFWDAFSSAPVNSDSNTKI SKDQIDSASKTGPGNRRVESYDADFELVYKAITGGVVPAFSSSGAGDETHLPARESTW SSLRRKFISRSLARVYSDSALIRDLDPRVDRVQHLAAEASTSPPFLSPSSLSSDSSIS SKYSSDSPSLSPSTSSPTSLGLSPASSNFSHTLVPSSRSPLHQSSNEEPSKSGLGSIR SPSKTSSIAERRGGFSSLKLPSFQKDLVLPPRVPTSLRREEEVTDKSNNNSVKQLTGV CCPEKCTGNTSTVHTKTGITERTDSISEACGNLQLLVYRWPSKEKLTTFTRKDLDPKS VLIFVTPEDSRSEAVKTVHIWVGGEYESSKCVDTVDWQQVVGDFFHLKELGNTLPVKV FKEHETENLLEVLNAR</aaseq>

Gene Sequence

<dnaseqindica>2676..2729#2..1348#ccggatggcacctcactcaccttatgcgccgctgcatttagtacccaaaatgctgaacgaaccctcacctgctgccctggactctaggggtgcattcatcgttcatgtgctctcatcgatctatgtttgggttggaatgaagtgtgatcaagtaatggagaaggatgcaagagcagcggcgttccaggtggtgaggtatgagaaggtgcaggggcatatcaaagttgtcagggaaggaagtgaggtaccagaattttgggacgccttttcaagtgcacctgttaattcagacagcaatacaaagattagcaaggatcagattgattcagcatccaagactggcccggggaaccgtagggtggaatcttatgatgctgattttgagcttgtatacaaagcaatcactgggggtgttgtgccagcattctcttcttcaggtgctggtgatgagacccatcttccagcaagagaaagtacctggagttcactaaggcgcaagttcatctctaggtcgttagctcgagtctattcagattctgctttaatcagggacttggatccgcgggtggaccgagtacaacacctggctgcagaggcatcaacatcaccacctttcctatctccgagctctttgtcatcagattcaagcatcagttcaaagtatagttcagactcaccctcactgtcaccttcaactagctcgccaacatcacttggtctttcgcccgcttcatctaatttttcccacactttggtgccatcatctaggtccccccttcaccaatcatctaacgaggaaccttcaaaatctggcctggggtcaatacgctctccctccaagacctcttctatagcagaaagaagaggagggttttcatctctgaagttaccatcattccaaaaggatctagtattaccaccaagggtaccgaccagccttcgcagagaagaggaagtcacagataagagtaataataatagtgtaaaacagcttactggtgtgtgttgcccagagaaatgcactggcaatacttcaacagtgcacactaaaactggaataactgagcgtactgacagtatctcagaggcttgcggtaatttacaactattagtctaccgttggcccagcaaggaaaagctaactactttcactcgcaaggatcttgacccaaaatcagttttgatttttgttactcctgaagacagcagaagtgaagcagttaaaacggtacacatttgggtaggaggtgaatatgagagcagcaaatgtgttgacactgttgattggcagcaagttgttggtgatttttttcatctaaaggagctcggcaatactcttcctgttaaggtgcctacacttatactatacaatatctattttgtttactctactttgcttttaaaggttcagtgctagttgaattttatgctctgtaagaggttagagaatactaaattctaactttacgaagctagttgaattttatataccgaggatactaaattctagctttactaccatctcagatagttttccaccactgccgaaactttgctagcagccacccattatttatcattgctttgagctcactgcgcacactagtctgccttgaactctttgccttttgcgcgttgcagttatggaccaaatattttagtggaatacagaaatacagaatcatatgttatgctattactgtgtagaaatattgcaaataggtgaaccattttgtggctcattgagaattatatattcagaacattttcaatttgcatagactccaaatatgtttaagtccgataattagttactggacatggactttttttctttcatttatggaccatgacttcacaatcttctcctagattattggaccatcttaggaagggaaaatggaaacatgaaagcttgactttttttttcgccggtatgtagagtgcctagtgcggtagtgccagacaactttatcagatattttatcctctggattatattatgtcatgattcatgaccatatacctctagttttgtagtatatgcccatatgaacctaacaggcatagccatgcgtatactacaaaactgatgcgcatatgaacctagcaggcataaccacgcattggttgactcttctagcgagaagcacatggtgaatccttccatatcatcttacaaatggaatctataatttctgttttctatgaggcttcacattccattccatcttcttgtgaaataatattatgtatgaactggcatggtccgtaaacttactgtagaaaaaaaaagactaatacttctcttgattatttttcatatcggtttactgtagtagcacatggaagtatggaacttaggttgatgtttcatttattgggccacaccacaattctgtgcacttctggcattcactataaatcctcataaatttggcatgaattgtgtgaaccactgaaccttgcctagaattaccttctcttacttctacttggctggtggtttctcctgtccttacaaatgtcacgaataccaatcagcatctgtggatttatgttataaagaaatgttacaaattccacacctaagtgcaatacttcttcatgccatgcaacattttgttctgcctgaaaatttataactggacactaattggatcggaataatgcaggttttcaaagagcatgaaacggagaatcttttggaagtgctgaatgctcgttaatggtaggctcaggctgtaggtatcagcatattgtagtagcttaacaaagtcagccgtgaagtatgattgaatgaaggcatctcctccagaatcgctccatgcggtggtgattttcagcgaggtataagccgttacaactattccccttgaacatatagaccacagattccatttagtagaactgatgatggattggcaattgtgcctacctcatatgatttgcttatggtcagaaaatgggcaggaggctgccagaacgttgtatctgtgagttaaaacacacatggatcaggttttggcacaatttgggtgtatattctccgctcccctgtaatgtaagctcagaaactgggaggcaacggtgtcgttttcaccctaaaaatttcttgtacatctcgaaaaagaaacagatcagatgtgtaatcctcttgtctt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0115800, RefSeq:Os05g0115800