Os05g0117798

From RiceWiki
Revision as of 20:03, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0117798

Description

Kinesin, motor region domain containing protein

Version

NM_001187257.1 GI:297723644 GeneID:9268593

Length

6515 bp

Definition

Oryza sativa Japonica Group Os05g0117798, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:918538..925052

Sequence Coding Region

919453..919622,919715..919844,920003..920164,920254..920736,920839..920936
,921033..921189,921282..921351,921446..921522,921633..921686
,921772..921852,921932..922043,922174..922260,922351..922526
,922625..922786,922863..922970,923049..923207,923294..923377
,923552..923757,923865..923966,924060..924169,924258..924409
,924500..924730

Expression

GEO Profiles:Os05g0117798

Genome Context

<gbrowseImage1> name=NC_008398:918538..925052 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:918538..925052 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggataggaggattggccttacctcaccgtcaccaaagtcgaccgagaagtccgggagagacttgagatccggaggtgacgccaatggcggcgcaaacactaacagtaactccattcccagaggtgataaggagaagggagtcaatgtgcaggtcattctcagatgcaggcccatgagtgatgaagagacaaagtcgaatactccggtagtgatctcgtgcaatgagcgccgccgtgaggtcgccgcgacacaaattattgccaataagcagattgatcggacctttgcatttgacaaggtgtttggtccagcatcgaagcagaaggatttgtttgagcaatctatctcaccaatagtaaatgaggtccttgagggctataattgcacaatttttgcttatgggcaaactggtactgggaaaacctacacaatggagggaggtggaactagaaagaccaagaatggtgaactcccaactgatgctggagttatcccaagggctgttaggcaaatctttgacattcttgaagcccagtgcgctgagtacagcatgaaagtcaccttccttgagctctacaacgaagaaatcactgatttgttggcccctgaagaaccaaagttccctattgttcctgaagacaagacaaagaagcctattgccctcatggaagatggcaaaggaggcgtttttgtgagagggcttgaagaagaagtcgtgtactccgctggtgaaatctacaaaattcttgacaagggttctgcaaagaggcgcactgcagagacactgctgaacaagcaaagtagtaggtcacactccattttctctatcacaattcacatcaaggaactgactcatgagggtgaggagatgatcaaaattgggaagcttaatctagtcgatctagctggttcagaaaatatctcacggtcaggtgctagagatggcagagcgagagaggctggggagatcaacaagagcttgctgacacttggtcgagtcatcaatgctcttgttgaacactctggacatgtcccatacagagatagcaaactgacaagattgctaagagactcattgggagggaaaacaaagacttgcattattgccacaatatcaccttcagtatattgtttggaagagacactgagcacactggactatgcacaccgtgctaaaaatatcaagaacaagcctgaggtgaaccaaaggatgatgaaatctgctgtgatcaaggacctgtactctgaaattgaccgtcttaagcaagaggtgtttgctgcaagagagaagaatggtatatacattccaagagaacgctacctccaagaggaagccgagaaaaaggccatgacagagaaaattgagcgtctgggagctgatttagaggctagggataagcaattggttgaactaaaagagctttatgatgctgaacaacttttgagtgcagagttgagtgaaaaactcgggaagacgcagaaagatctggaggacaccaagaatgttctgcatgatttagaagaaaaatacaatgaagcagagtcaaccattaaggaaaaggaatatgtcatctttaatttattaaagtcagaaaaatcactggtagactgtgcatataacctccgtgcggaattggaaaatgcagcagcagatgtttcagggctattttccaaaatagagcgtaaagacaagatagaagatgggaacaggtcactcgtgcagagatttagatctcaactgaccaatcagctggataccttgcataaaactgtgtccacctcagtcatgcagcaggagaatcacctcaaagaaatggaagatgatatgcaatcctttgtatcttcaaaagatgaggctgctcaagggctaagggagagcatacaaaagttgaaacttctccatggttcaggcattacagctttggatagtttagcaggtgaaattgacatgaactctcagtcaacatttgagagattgaactcgcaagtgcaatcacacacgtcatctcttgagcaatgttttggaggaattgcttcagaagcagacaatttgttaaatgagcttcagtgtagcctttctaaacaagaagagaggttaacccaatttgcaaagaagcagcgggagggacacttacgagctgtggaagcatcacggtccatctcaaagatcactgctggtttcttcagctcacttgatgttcatgcatctaagctcacgagtattttggaagaaacgcaaagtgtgcaagatcaacaacttcttgaccttgagaagaaatttgaggagtgtgcagctaatgaagaaaaacaacttctagagaaggtggcagagatgcttgcaagttcccatgcaaggaagaagaagctggtccaaacagcagtaggtaaccttcgagagagcgctgtaaaccgcacaagtcacctacagaatgaaatttcaactgcccaggacttcacttcgtccgtgcgggaaaagtggggcttttacatggaagaaactgagaagaattacattgaagataccactgcagtggacagtggaaggtcgtgcttggcagaagtgcttgtggaatgtaaggcaaagacaaccatgggtgcacaacagtggaagaacgccgaggactctcttttcagccttggcaaaggaaatgtggaatcggcagattcaatagtcaggactggaaccgaggctaaccaatcgctgcgttccaaattgtcgtctgcggtatcaactacccttgaagaaatagatatagcaaacaaggcccttctttcttccatcgacagttcactaaaacttgaccatgatgcgtgcgcaaacattggctccataatcaaaccatgccatgaggaaataagcgagttgaagggaggacattaccacagggttgttgagattactgaaaatgctgggaaatgcctagaggaagaatatctggtggatgaaccatcatgttcgactccgagaaggcggcaaatcgacctgccaagcatggaatccattgagcagttgcgaaccccggattacgatgagcttctcaaatcattccgagagtcgagggcgagtttgaagcaggcaaatggagacatgaagcatttcttagaggtgcaagaagctacaccaccatcaatcacagacccgagagctcctcttatagcaagaaattag</cdnaseq>

Protein Sequence

<aaseq>MDRRIGLTSPSPKSTEKSGRDLRSGGDANGGANTNSNSIPRGDK EKGVNVQVILRCRPMSDEETKSNTPVVISCNERRREVAATQIIANKQIDRTFAFDKVF GPASKQKDLFEQSISPIVNEVLEGYNCTIFAYGQTGTGKTYTMEGGGTRKTKNGELPT DAGVIPRAVRQIFDILEAQCAEYSMKVTFLELYNEEITDLLAPEEPKFPIVPEDKTKK PIALMEDGKGGVFVRGLEEEVVYSAGEIYKILDKGSAKRRTAETLLNKQSSRSHSIFS ITIHIKELTHEGEEMIKIGKLNLVDLAGSENISRSGARDGRAREAGEINKSLLTLGRV INALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATISPSVYCLEETLSTLDYAHRA KNIKNKPEVNQRMMKSAVIKDLYSEIDRLKQEVFAAREKNGIYIPRERYLQEEAEKKA MTEKIERLGADLEARDKQLVELKELYDAEQLLSAELSEKLGKTQKDLEDTKNVLHDLE EKYNEAESTIKEKEYVIFNLLKSEKSLVDCAYNLRAELENAAADVSGLFSKIERKDKI EDGNRSLVQRFRSQLTNQLDTLHKTVSTSVMQQENHLKEMEDDMQSFVSSKDEAAQGL RESIQKLKLLHGSGITALDSLAGEIDMNSQSTFERLNSQVQSHTSSLEQCFGGIASEA DNLLNELQCSLSKQEERLTQFAKKQREGHLRAVEASRSISKITAGFFSSLDVHASKLT SILEETQSVQDQQLLDLEKKFEECAANEEKQLLEKVAEMLASSHARKKKLVQTAVGNL RESAVNRTSHLQNEISTAQDFTSSVREKWGFYMEETEKNYIEDTTAVDSGRSCLAEVL VECKAKTTMGAQQWKNAEDSLFSLGKGNVESADSIVRTGTEANQSLRSKLSSAVSTTL EEIDIANKALLSSIDSSLKLDHDACANIGSIIKPCHEEISELKGGHYHRVVEITENAG KCLEEEYLVDEPSCSTPRRRQIDLPSMESIEQLRTPDYDELLKSFRESRASLKQANGD MKHFLEVQEATPPSITDPRAPLIARN</aaseq>

Gene Sequence

<dnaseqindica>916..1085#1178..1307#1466..1627#1717..2199#2302..2399#2496..2652#2745..2814#2909..2985#3096..3149#3235..3315#3395..3506#3637..3723#3814..3989#4088..4249#4326..4433#4512..4670#4757..4840#5015..5220#5328..5429#5523..5632#5721..5872#5963..6193#gccattgccactgctccctacctactcctcctcttgctcctcctagcttagctctggacccgtttggatcgcactgactcgctgaccatcactgtgagtgagtgccctgttctttctttttttgaacgaattttttttttgaacgaagtgccctgttctttcgatttgcgcttgttcttgcgtttcttgctctgctggtgctgggtggaggcgattcggtgttgtctcggatcttctttttattttatttctgcaactcttgagttctgatgctttctgaagttcgtttttttttttggttgttgttcttcttcgtcagttcagttcatggttcctgcgagaggtttttgcggaacaagatctcgttttgaacttttgatagcttattaatcgatgagtggttgcagaaggtaatccttgaatacgattgctgccgtgatattgtttctccgatcttgttttgattggttgaataatttcttgctttaccccgtttatgtgattgcttgcttaccatttcaatgacatagcgatgaaagaaataaataaataaaagatctcgttttgatttgtgaaaacagccgctaatcctaatcttaattcgttctgaatgaagatcccatccacgatacctcaagatttgcatctgcttctcccttgtacttgccctcttgtctctttctgcatttgctccgccggcattttggctcttcttgctactctgatctggccaaatttgacacctgctgtcacattcagttataaagctagtagtagtggttgggatttttttttccagttcaattcttggagcaatttgaatctgcatttgaagaatcggtgctcctttgcagaattgggagctgtgggcagaaagactaggccttgtattgttcagagaatcagagattgaagatggataggaggattggccttacctcaccgtcaccaaagtcgaccgagaagtccgggagagacttgagatccggaggtgacgccaatggcggcgcaaacactaacagtaactccattcccagaggtgataaggagaagggagtcaatgtgcaggtcattctcagatgcaggtgaagagagctcagcagttgcagttcagaaattatgtttggttcttctttttttttaatggttctcacaatgtgaattttgctgcattcaggcccatgagtgatgaagagacaaagtcgaatactccggtagtgatctcgtgcaatgagcgccgccgtgaggtcgccgcgacacaaattattgccaataagcagattgatcggacctttgcatttgacaaggtatcagatcatatttggcagtcacttcattaggcctattttttcagtggtgacttgctgtggtcacttgccttgtactttgcatttacttattattgtgttggctccacgaatgttagttttggcaaaaaatttagtgaagtggtcattctgtgcaggtgtttggtccagcatcgaagcagaaggatttgtttgagcaatctatctcaccaatagtaaatgaggtccttgagggctataattgcacaatttttgcttatgggcaaactggtactgggaaaacctacacaatggagggaggtggaactagaaagaccaaggtaaaaaaaaagtgcttgagatcatttaaaatcgcatttttggtttttctgcatgttctttacaattgacttgtgcttgtaacatccagaatggtgaactcccaactgatgctggagttatcccaagggctgttaggcaaatctttgacattcttgaagcccagtgcgctgagtacagcatgaaagtcaccttccttgagctctacaacgaagaaatcactgatttgttggcccctgaagaaccaaagttccctattgttcctgaagacaagacaaagaagcctattgccctcatggaagatggcaaaggaggcgtttttgtgagagggcttgaagaagaagtcgtgtactccgctggtgaaatctacaaaattcttgacaagggttctgcaaagaggcgcactgcagagacactgctgaacaagcaaagtagtaggtcacactccattttctctatcacaattcacatcaaggaactgactcatgagggtgaggagatgatcaaaattgggaagcttaatctagtcgatctagctggttcagaaaatatctcacggtcaggtgctagagatgtgagtaaacttaaaattttctattcattgattaaaatataatatatctatctgatttttcaactgcccaatactacttttgatattgaattatcattgcagggcagagcgagagaggctggggagatcaacaagagcttgctgacacttggtcgagtcatcaatgctcttgttgaacactctggacatgtcccatacaggtaattctaaggacagtgtcctggcagatttgattctagaaacattttggcattttgccaagggtgtttatatgttgctccatttaattgttccagagatagcaaactgacaagattgctaagagactcattgggagggaaaacaaagacttgcattattgccacaatatcaccttcagtatattgtttggaagagacactgagcacactggactatgcacaccgtgctaaaaatatcaagaacaagcctgaggttattgcctaagcaagttatatttatatctgactatttagtacagtaaatttgtggtagcctaacttgctcttcttactgccaatattcaggtgaaccaaaggatgatgaaatctgctgtgatcaaggacctgtactctgaaattgaccgtcttaagcaaggtttgtcttcatgattattattattcttttgtagagcattgaagcggtaggaatcatacagtgtgtattcaccccgtctcctttatgtcttcagaggtgtttgctgcaagagagaagaatggtatatacattccaagagaacgctacctccaagaggaagccgagaaaaaggtttctctttttcccaccaaatccacattaggattgtttctataagctgaggaaaagctttgttttctaaatctgcatctcatctttctgaacctattgtctttacttaggccatgacagagaaaattgagcgtctgggagctgatttagaggctagggataaggtatgtttgtctataagcatgcataacaccagaagaaaaatattagcttgttaacaactgaatgtatttttgtaccaatgagcagcaattggttgaactaaaagagctttatgatgctgaacaacttttgagtgcagagttgagtgaaaaactcgggaagacgcaggtacctctccagtttcccaacgatcagtatatgtgcagtttatagtacatataatcattattctgtctcttgaatgcagaaagatctggaggacaccaagaatgttctgcatgatttagaagaaaaatacaatgaagcagagtcaaccattaaggaaaaggaatatgtcatctttaatttattaaagtcaggttagtcaaaataacctattctggcaacacctgtcttagcatgtcttggtcattacttattgttaagaataccggcaaatgaaattatcaaatgatgtgaggaatttacttattgttgattttgccacagaaaaatcactggtagactgtgcatataacctccgtgcggaattggaaaatgcagcagcagatgtttcagggctattttccaaaataggttagggatctcaacttgattacctttattctcgattactgttatggacttaatctcacttcagttgtccttgttctcgattactgacagagcgtaaagacaagatagaagatgggaacaggtcactcgtgcagagatttagatctcaactgaccaatcagctggataccttgcataaaactgtgtccacctcagtcatgcagcaggagaatcacctcaaagaaatggaagatgatatgcaatcctttgtatcttcaaaagatgaggttattcaatctcccatcatctttttcacttcccagtttcttttgtatgaatgatcttccaggggtgtatactgatagcgtcagctaccaatttttaggctgctcaagggctaagggagagcatacaaaagttgaaacttctccatggttcaggcattacagctttggatagtttagcaggtgaaattgacatgaactctcagtcaacatttgagagattgaactcgcaagtgcaatcacacacgtcatctcttgagcaagtaagcttacttcttttggcctgcttgtaacagcagtatgtattgcaatatttctgattgcccttcctattgatagtgttttggaggaattgcttcagaagcagacaatttgttaaatgagcttcagtgtagcctttctaaacaagaagagaggttaacccaatttgcaaagaagcagcgggaggttcgtctcatgttgtaacactaaactactagctgtcttcatccactcttctgttgtaaattttgttcttctccacagggacacttacgagctgtggaagcatcacggtccatctcaaagatcactgctggtttcttcagctcacttgatgttcatgcatctaagctcacgagtattttggaagaaacgcaaagtgtgcaagatcaacaacttcttgaccttgagaagaaatttgaggtatgttaattattgcatcaacaataagcaattcataagctaatattttgttttgtgtcaatatgtaattttgccattttaaacaggagtgtgcagctaatgaagaaaaacaacttctagagaaggtggcagagatgcttgcaagttcccatgcaaggaagaagaagctggtaaggactgtccatttgttatactttggcttttggtcatctgataatcttattctctagatagatcagctatcaaaagaagttctgtggtgataaatagatgagttggaggctatttacaaaattactacacattgctgaatgtgaccgtgattccgcgaacatgtactgcaggtccaaacagcagtaggtaaccttcgagagagcgctgtaaaccgcacaagtcacctacagaatgaaatttcaactgcccaggacttcacttcgtccgtgcgggaaaagtggggcttttacatggaagaaactgagaagaattacattgaagataccactgcagtggacagtggaaggtcgtgcttggcagaagtgcttgtggaatggtgagtactcagtatcatggcatcatgctgtgaattgtgataccttctgctatgctatacggaatcacggatgtctcaatgtttgaccattgctatctcaactgcagtaaggcaaagacaaccatgggtgcacaacagtggaagaacgccgaggactctcttttcagccttggcaaaggaaatgtggaatcggcagattcaatagtcaggtaccagaatagaaaatatcaagtacttgaaacattcttatcgtatgctatgaacaatgaccattatgctatattggtctgtgcatgaaacaggactggaaccgaggctaaccaatcgctgcgttccaaattgtcgtctgcggtatcaactacccttgaagaaatagatatagcaaacaaggcccttctttcttccatcgacagtaagatttacagtgaaaattttgagttactgtagcacagtgcgtgacaatcaaattttctttctcaccgcaacttctgttatttcaggttcactaaaacttgaccatgatgcgtgcgcaaacattggctccataatcaaaccatgccatgaggaaataagcgagttgaagggaggacattaccacagggttgttgagattactgaaaatgctgggaaatgcctagaggaagaatatctggtgagtagtcatgaaaagtaacagataggagaatgtgatctgtctcttactgaccaaattgctattgcttcttctccttgaacacctcaggtggatgaaccatcatgttcgactccgagaaggcggcaaatcgacctgccaagcatggaatccattgagcagttgcgaaccccggattacgatgagcttctcaaatcattccgagagtcgagggcgagtttgaagcaggcaaatggagacatgaagcatttcttagaggtgcaagaagctacaccaccatcaatcacagacccgagagctcctcttatagcaagaaattagatttatagagtgaatgtacaaaaggaacaaattgtttagctttgatttttggggtattgatttactgttgatagtgccattcgatttattgctgctgttggttgggatgggaggtctgaagctgatctgtttgtagagatcagtagaaaggcatgtgtatttactactgcataattgaggataatgttagctctagtgtaatatatatccacacaggtaacaatgacaagtgctagtacagatttgactcagataatcttccatgctttgctgcaaatttgaacaattattagaagcaaaaggaaaggaattgagtacaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0117798, RefSeq:Os05g0117798