Os05g0227800

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Revision as of 10:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0227800| Description = Homeodomain-like containing protein| Version = NM_001061504.1 GI:115462738 GeneID:4338153| Length = 1949 bp| Defini...")
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Gene Name

Os05g0227800

Description

Homeodomain-like containing protein

Version

NM_001061504.1 GI:115462738 GeneID:4338153

Length

1949 bp

Definition

Oryza sativa Japonica Group Os05g0227800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7779524..7781472

Sequence Coding Region

7780164..7780586,7780669..7781379

Expression

GEO Profiles:Os05g0227800

Genome Context

<gbrowseImage1> name=NC_008398:7779524..7781472 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:7779524..7781472 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggagacagttgttatgttaactcactggttgttaaaatcaactcgccagagtgggatgatggcaccatgatgggggctagtccacccgaggagcaacattcaacggtcgaagaagttgttgtcgtgagacgaaaccagaaaagaacaaagaatttcagcgggaaggaagacgaagggttggtttcggcatggttgaatgttagtaaggatgtagtccaaggcatcgaacaatctcgttgtgcatactggaagagaatttacgattacttccacgcaaacaaggacttcacctcagaccgttctcaaaattccctcatgcaccgctggtctactattcaagagaatgtgaccaagttcgagggttgtctaagccggattggggatagaaagcaaagctgggtttcaagtcaagataagattatgcatgcatgtgctctgtacaaggccgaagatgagaaccataggccatttcacatgatgcactgttggaatctcttgagaaaccagcaaaaatggattgataggtcgtctcagctgccatctcacaaaaaacagaagataaccaacaattcaagtctaggtatgtctactactactactgatgatactgcggctgctcctcctcctcctccaggatttgagttatcgaagactccagaaagtattaatgctcctccaagatgtgagttatctgagagaccagaaagtaggaatgctcctccaagatgtgagttatctgagagaccagaaaataggaagggggagaaagaaaaactacgacgaggtggagatgtggtctttgtggaggatttagatgatttgttggcaaagaagaaagaggcagatgtggagaaagagctcaagaaagatgagagatatatacaatcacatgccctagagcaagagaaggttgcactagaacaagcgaaggttgcaaacgagacaaaaaatcttgagatgaggagcaaagaattagaattgaagaccaaggagatagatttgaaaagaatgttagaagaagagaggattatgactatggatattagtgccatgtctgggctacaacaacaatattacaagagcttgcaggaggagatcgtcactcgacgatttaatagctcgggttga</cdnaseq>

Protein Sequence

<aaseq>MDGDSCYVNSLVVKINSPEWDDGTMMGASPPEEQHSTVEEVVVV RRNQKRTKNFSGKEDEGLVSAWLNVSKDVVQGIEQSRCAYWKRIYDYFHANKDFTSDR SQNSLMHRWSTIQENVTKFEGCLSRIGDRKQSWVSSQDKIMHACALYKAEDENHRPFH MMHCWNLLRNQQKWIDRSSQLPSHKKQKITNNSSLGMSTTTTDDTAAAPPPPPGFELS KTPESINAPPRCELSERPESRNAPPRCELSERPENRKGEKEKLRRGGDVVFVEDLDDL LAKKKEADVEKELKKDERYIQSHALEQEKVALEQAKVANETKNLEMRSKELELKTKEI DLKRMLEEERIMTMDISAMSGLQQQYYKSLQEEIVTRRFNSSG</aaseq>

Gene Sequence

<dnaseqindica>641..1063#1146..1856#aaggctccatcctcgctagttgtggcgagccccaaaaccaactcccaatccgcatctccctccgctgcgccggcgccgccgcccgccgccgccgtggcccggccgtcggctcgcctccgcctccatcctcgggcaccggacgtcgtccccgccgcccggaggccgacccctttgcctccttaggccttctgccctagttccggcggcctggctctaaattcggccgcagccggcgcaggtcgatcaccgcccgcgcgccattggaagcggaggtaatcccccgcccagctgccaagatgaattggctctttatttattgatatgtgctcccggctgccaagatgaaatgtttatttattgataaatttgatatgctgagttgggaatttttgtatgtgcttgtgcactggatcagttgatctgattgaaactaatgctgattttaggtggagaaaggaagctggcattggtgcgtgattgaaatgctgacctgattttttttagtacattgaggatgtgcgttctctgaactttttactgaaatgactgttgcatgaaaaatatgtgctacattctatttttgtacaacactctatagactgaacatatgccattttttgttataaattcaacagtagcgatggatggagacagttgttatgttaactcactggttgttaaaatcaactcgccagagtgggatgatggcaccatgatgggggctagtccacccgaggagcaacattcaacggtcgaagaagttgttgtcgtgagacgaaaccagaaaagaacaaagaatttcagcgggaaggaagacgaagggttggtttcggcatggttgaatgttagtaaggatgtagtccaaggcatcgaacaatctcgttgtgcatactggaagagaatttacgattacttccacgcaaacaaggacttcacctcagaccgttctcaaaattccctcatgcaccgctggtctactattcaagagaatgtgaccaagttcgagggttgtctaagccggattggggatagaaagcaaagctgggtttcaagtcaagataaggtttgctcatatgtccttaaaactagttcctcatttttcatatagtgactagacatttaatatgacattttgatatgtgcagattatgcatgcatgtgctctgtacaaggccgaagatgagaaccataggccatttcacatgatgcactgttggaatctcttgagaaaccagcaaaaatggattgataggtcgtctcagctgccatctcacaaaaaacagaagataaccaacaattcaagtctaggtatgtctactactactactgatgatactgcggctgctcctcctcctcctccaggatttgagttatcgaagactccagaaagtattaatgctcctccaagatgtgagttatctgagagaccagaaagtaggaatgctcctccaagatgtgagttatctgagagaccagaaaataggaagggggagaaagaaaaactacgacgaggtggagatgtggtctttgtggaggatttagatgatttgttggcaaagaagaaagaggcagatgtggagaaagagctcaagaaagatgagagatatatacaatcacatgccctagagcaagagaaggttgcactagaacaagcgaaggttgcaaacgagacaaaaaatcttgagatgaggagcaaagaattagaattgaagaccaaggagatagatttgaaaagaatgttagaagaagagaggattatgactatggatattagtgccatgtctgggctacaacaacaatattacaagagcttgcaggaggagatcgtcactcgacgatttaatagctcgggttgacctcgtatgtctattattgttgttacggactattatgttttgcgaaccatgttgaagtcgtatagagaattatggtaaacagcaaaccttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0227800, RefSeq:Os05g0227800