Os05g0228000

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Revision as of 10:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0228000| Description = Purine and other phosphorylases, family 1 protein| Version = NM_001061505.1 GI:115462740 GeneID:4338154| Length = 55...")
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Gene Name

Os05g0228000

Description

Purine and other phosphorylases, family 1 protein

Version

NM_001061505.1 GI:115462740 GeneID:4338154

Length

5525 bp

Definition

Oryza sativa Japonica Group Os05g0228000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7786509..7792033

Sequence Coding Region

7786667..7787269,7787369..7787524,7787867..7787934,7791551..7791806

Expression

GEO Profiles:Os05g0228000

Genome Context

<gbrowseImage1> name=NC_008398:7786509..7792033 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:7786509..7792033 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgctcggtcgtcgtcgtcgccggcgaagacgacgacgacgctggctttgctgttggtggtcgcggcggcggccgctgctgtggcggcggaggcggcggccgtggcggcggacgcggcgcggggcgtccggcaagtgaaccggcggggcccgtacctgggcgtggtggtgcccaacgggttcgagatggagccgctcctccgctcgccggccttctcgccggccaagaagctgccatacctcgacgtcgcaggaaggagatttcgcttcggatcgataggagagaagaaggtgatcatcgtcatgacaggcctcggcatgctcaactccggcgtgaccacccagctcctcctcaccctcttcgacgtcgagggcatcgtccacttcggcatcgccggcaacgccgaccccgacctccacatcggcgacgtcaccgtcccccgctactgggcgcacaccggactctggaactggcagcggtacggcgatgggccggagaaggagctcgcgctggagtccaatggcgactacacgaggaagtacggggcgctcaacttctccgactacggcgtcgccggcggcggcggcggcaacctgctgaacggcgtgtggtaccagccggaggaggtgttcccggcggacggcacgccggagtctcgccgccacgagttctgggtccccgtcgacggccggtactaccagctcgcccagaagctggaggcgatgccgctggagcgctgcgtcaaccgcaccgggacggcgacgtcgccggcgacgtgcctggcgcgggcgccggcggtggcgcgcgtggagcgcgggtgcagcgccagcgtgttcgtggacaacgcggcgtacaggcagttcctgcggtccaggctgggcgtgacgccgatcgacatggagtcggccgccgtcgcgctggtggcggcgcagcagggggcgccgttcatcgccatacggtcgctctccgacctcgccggcggcggctccgcggagtccaacgaggccggcgtgttcgcggcgctggcggcgcagaacgcggtggccgtcgccgtcaagttcatatcgctcttaagctaa</cdnaseq>

Protein Sequence

<aaseq>MAARSSSSPAKTTTTLALLLVVAAAAAAVAAEAAAVAADAARGV RQVNRRGPYLGVVVPNGFEMEPLLRSPAFSPAKKLPYLDVAGRRFRFGSIGEKKVIIV MTGLGMLNSGVTTQLLLTLFDVEGIVHFGIAGNADPDLHIGDVTVPRYWAHTGLWNWQ RYGDGPEKELALESNGDYTRKYGALNFSDYGVAGGGGGNLLNGVWYQPEEVFPADGTP ESRRHEFWVPVDGRYYQLAQKLEAMPLERCVNRTGTATSPATCLARAPAVARVERGCS ASVFVDNAAYRQFLRSRLGVTPIDMESAAVALVAAQQGAPFIAIRSLSDLAGGGSAES NEAGVFAALAAQNAVAVAVKFISLLS</aaseq>

Gene Sequence

<dnaseqindica>4765..5367#4510..4665#4100..4167#228..483#tttttgagctctgactcaaatcaaatcctcttcctgtttcctagctctatatataaaccctaccattctcctgtctctcttcatctcgttcttcccacacacgcgcgcacacacacatcttgtgtgagacttgtatgatcgattgctagagctatttcgattcgtcacgttatacgcatacgcgttattagcttagttcattagctcaaggttaattaattaacgacatggctgctcggtcgtcgtcgtcgccggcgaagacgacgacgacgctggctttgctgttggtggtcgcggcggcggccgctgctgtggcggcggaggcggcggccgtggcggcggacgcggcgcggggcgtccggcaagtgaaccggcggggcccgtacctgggcgtggtggtgcccaacgggttcgagatggagccgctcctccgctcgccggccttctcgccggccaagaagctgccatacctcgacgtcgcaggtatacatacgaactatatacatcacgcctacattagttagtaaacgatgagtaggcacatagggatacaagaggggcggacaagcgcgctttttccccgcttatcccacttctagtttattttttcttcgtactatatatcatgcaaaaaaaaatagactagcatgcaagcgggttttttttttgatagtgggactacccacttgcatgcatgcctataggcacacactcgtgtacgcatacacgcataaactaattaatttgtactctgtttcttggaattacgcaaaatgtatagtaactaaaataaaattagacacattgtaaactacaaatctgaacatacctattgaggaatctagacatacctatcgggacgaaggtattaccatacccttgtttgattatgtaattcctttagtgtagatgcttgcttttttgggagtactcccccaaaaactcagcgtttgttttggtagaagctataaccaattaaaaagtttgcaactcaaatatttgcgtgaatgaaacctgtagatgtttgagttgcatcaacacttaaccctattactatatatatggtgaaaagacattattattcaacacttaatcctattactatatatctccatcttaaaattggtgaaaacttgcatgaccaccatcattctggcacaggagcctgaatgtttgtacctagacagttagccgcttcttttttttttttgagaaccacagttagccgcttgatgtttggaggaatggaaaacataggtagactgaaacattcactataaaaaacggatatacatgtcgatattataggtcccggaatatctcatatataatcctgtaaattttttcacccgatcagatttcgtttaaaaagtgagagatagaaccatatatttatgcaagaattaacaggttgccaaatgcgaatgtctgataaataaaccttaattaacgtcgtgtttgagagaggaaagtgagaatattgagaacatacgtaaaacgagatgagtcattagctaacacatgacaaattgagtattaattattttaaacttaaaaatatagattaatattttttaaaaaaataactttcgtataacgtaccatttcacggttttgggaaggttgtgcgaaaaaacatagacttttcaatagttctctcgagagcaacctaattatacaacaaacacatcggaaaagtatgtcgtattgttcttgattggataatcgtgtagggaacgactcttctgtactctatatcgaacaaacacgtagcatgtacgattttttatgttggattaaaactgcggtctgcggacatacgtgttgtagatttcttcacgcatttccttttccaaacaatcgctttacgaattaattccatgttgttcaaacaaatcttctgcaaatgaactactactaaaagaattgcacgtgatatcactgctgcatatatatgcttatacaatatgagtcagaaccagtgggatttgagatcgtactatatttaattttcaagaagataatactccacaaataagtaacgatgttttataataatacgtgtagtcaacatatttaaaaattttaccattaatttctctttgaatatttcaattcaattttttgagaagatatatctaacacgcaagttacaaggcaaataaaaattatactattgttaaaaatgggttgaatacgtatgtttatttaatccaaaccaatggatgcatatagggatgtgcatgtatattagtcatcccatacttgcgcatgcacaattaacacatacattaaggaaaaaaaaacacccctcattcgatcggtcagttgtgatttattctctaccatattcaacttgctacacatgcatgtaacgtacggtaggattatttaaatgattgattactgtgggcgacgtcgtcaggatcagctcaatcattaatacttgtagcataaaaaaaaaccagcataatactggatatgacatattctaatgcaataaatttaaacatacatgtgtttagattcgttatactaagatgtcacatccagttttaaattattttttagacgaaggaagtatgtgttaattagtatatccacttcaaaatatatgttaacttagaactaaagaaacacgttacaacagtatctagattactccctacattaaaaaaaagacaaaccctgattttcgtgtccaacgtttgaccgtccgtcttatttgaaaaaaatatgaaaaaaattaaaaagacaagtcacgcataaaatattaatcatgttttatcatctaacacaaatgaaaatacaaattataaaaaaattttattaagacggacagttaaagttggacacggaaatacaagatttgcctttttttagacggaggagtatttgtatagacttttatatgtcaaaagatgagaagaggaagtatgtgttaattagtatatccacttcaaaatatatgttaacttatgactaaagaaacacgttaaaacagtatctagattactctctacaaccaaaaaaaaaaaaagacaaaccctaatttccgtgcccaacgtttgacttgtccgtcttatttgaaaaaaatatgaaaaaaattaaaaagacaagccacacataaaatattaatcatgttttatcatctaacactaatgaaaatacgaattataaaaaaattttattaagacggacagttaaagttgtacacggaaatacatggtttgacttttttttagacggaggagtatttgtatagacttttatatgtcaaaagatgagaagttgacgacgtgtacctacctagctagccatgtggccaagttgctaagcttttactactacagtactactcttctacttcgtttcctctactaatcgtcgggtttaatttcaactcgtttaggccatgcatggcgtgtacgaacgcataccattgaccagcttgaagatcaaacagattatgataagctgtgtacgtacgtatataaatgcaagtagtcacaactgcttgtttgcgactctctcacaatcttgatgaataaattgatcgccagatttacaaaataaaattagtggttcatcaccatcaattagtagtagtagtatcgatctttttctacgagtagtacatgagtcgacgcacctgcagcatggctgtatatatgctaacacgcacagagctgcaaatgccccttcaacctaaactcaaaagattacacagaccagcgaaattaaacttttatttaaactttgaacaaatttgcatcaaaatccacgaaaattaaattttatttttaaattttcatcaaaatcccaatttgaattgaagaatttcaagtggatcataaatttccacattacagattttctctccttttttttgccaagattttgaattatgcaccaggcttgagcttaatttatagcccaaaccaagactgccagctgggctgcctcaaactcaggcccattagcacccccaaaccaatacccatcaagttgttctttctgtagtagaaaaaaaaaaaacgacatcaatcaagttcggttaaatatttttctcaccaaaaccacatgtctttccatgtaggaaggagatttcgcttcggatcgataggagagaagaaggtgatcatcgtcatgacaggcctcggcatggtaaatacttgtacaccttcattaatttcattacctaattaagccgtatacttatactacctctgtcttttaatagatgacactgctaattttttatcaatttttatcatttgttttattaaaaaaattcacgtaattataatgtattttattgtaaattattttatctcttaaagtactttaagtacgaattatatcttatatatttacataaaacttttaataagacatgatagaatttaacggcgtcataactatcatagagtagattgtgtcaattaccttaattattaattccattgtgccaacctgatcaactgccgcggcttcatacgaacgcagctcaactccggcgtgaccacccagctcctcctcaccctcttcgacgtcgagggcatcgtccacttcggcatcgccggcaacgccgaccccgacctccacatcggcgacgtcaccgtcccccgctactgggcgcacaccggactctggaactggcaggtgaatgattgattaattaatttcatcaaatttcatccaaatcaagaacaaattggttttggtgatttgatcggtgttcattaattaattcggacacagcggtacggcgatgggccggagaaggagctcgcgctggagtccaatggcgactacacgaggaagtacggggcgctcaacttctccgactacggcgtcgccggcggcggcggcggcaacctgctgaacggcgtgtggtaccagccggaggaggtgttcccggcggacggcacgccggagtctcgccgccacgagttctgggtccccgtcgacggccggtactaccagctcgcccagaagctggaggcgatgccgctggagcgctgcgtcaaccgcaccgggacggcgacgtcgccggcgacgtgcctggcgcgggcgccggcggtggcgcgcgtggagcgcgggtgcagcgccagcgtgttcgtggacaacgcggcgtacaggcagttcctgcggtccaggctgggcgtgacgccgatcgacatggagtcggccgccgtcgcgctggtggcggcgcagcagggggcgccgttcatcgccatacggtcgctctccgacctcgccggcggcggctccgcggagtccaacgaggccggcgtgttcgcggcgctggcggcgcagaacgcggtggccgtcgccgtcaagttcatatcgctcttaagctaagaagctgtcttaaccatcgtcgatgaaggttgagaatgataaccctataatggtaattaattagaagtgttacctcgtgtgttgttcacgatagacgttattgttctgattaaactttatattattgacacattttttaaaaaagaaacagttaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0228000, RefSeq:Os05g0228000