Os05g0232200

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Revision as of 10:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0232200| Description = Conserved hypothetical protein| Version = NM_001061516.1 GI:115462762 GeneID:4338167| Length = 3062 bp| Definition ...")
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Gene Name

Os05g0232200

Description

Conserved hypothetical protein

Version

NM_001061516.1 GI:115462762 GeneID:4338167

Length

3062 bp

Definition

Oryza sativa Japonica Group Os05g0232200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8025465..8028526

Sequence Coding Region

8025895..8025943,8026040..8026170,8026298..8026361,8026709..8026935,8027292..8027819
,8028109..8028205,8028287..8028342

Expression

GEO Profiles:Os05g0232200

Genome Context

<gbrowseImage1> name=NC_008398:8025465..8028526 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:8025465..8028526 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgatgctgctgtacaatgcagatagatcattaatatcacaagcagaactgaagatgaaagcagttgttgagtcaggaactatggatgttgattttagtcttgacaatggaggaagcattattctaaggctgcagttcctactcagtgatgaagatcgcagacgggtccaagaaatgaggaactctgcagtgaaaagaaagcagcaagagctgctttctgatggttatgtactttctcaagacagcttgttgtctaaacaagtcgaaaatatctccaacatttcgagagaaggagatgaatcttcagttaggaagagcatgtcactggatgatttgcaggagaaggctgttttctctgcaattattgtagatccccagatgaaagacacaaaagaatcaccggagcaaagtggatcaaatagtgcagtgcagaaaatgataagtgcctttcaaagcagctctccacaggatctgacgcggatcaaatcagaaagctcactaaaagggctgtctgcttcttcagagaatttcacccagtcttcttcagacaagtcatctagttcactagcaacccaggatgtttcaggccacacagaggcaggtcttgtggctgggacatcaggcaaaatgcagcttcctcctggtgacaaaagcttcagtaacaaaagatcaaatgcaaccgagcaacaggccgttctgtcaaccacatctgaaggcagaatccgtaggctattcagagagaaggacctcgataattcagagatggtgatcacagtccaaaaccggagcaagaagcggtcgatgccgaagcgtcgtcgcgccgccattggcccttactctcttgaacacatgcatccccatgtctgcatcaccactgcaagcaggcagctgagagagcttgttgagcttgagccacccttggattcgtttgtgtttgtaggacaagttgatatcaagagaccaaatgtgaggggaggagctagcatgcaagatcagggcacaagcgacagtaaaacgaaaaatgagatggtttctgctcgaggtgatgatcatggttttccaatattggatgggcggttgattaatcaggcaatgcgtgttgtcattgtgatcatagcttgcggagcaatatttctgaacaacagataa</cdnaseq>

Protein Sequence

<aaseq>MVMLLYNADRSLISQAELKMKAVVESGTMDVDFSLDNGGSIILR LQFLLSDEDRRRVQEMRNSAVKRKQQELLSDGYVLSQDSLLSKQVENISNISREGDES SVRKSMSLDDLQEKAVFSAIIVDPQMKDTKESPEQSGSNSAVQKMISAFQSSSPQDLT RIKSESSLKGLSASSENFTQSSSDKSSSSLATQDVSGHTEAGLVAGTSGKMQLPPGDK SFSNKRSNATEQQAVLSTTSEGRIRRLFREKDLDNSEMVITVQNRSKKRSMPKRRRAA IGPYSLEHMHPHVCITTASRQLRELVELEPPLDSFVFVGQVDIKRPNVRGGASMQDQG TSDSKTKNEMVSARGDDHGFPILDGRLINQAMRVVIVIIACGAIFLNNR</aaseq>

Gene Sequence

<dnaseqindica>431..479#576..706#834..897#1245..1471#1828..2355#2645..2741#2823..2878#agcatccatgtctcaggttttttttttctctgatgatttttccattcacatgagtatctgaagaaagcacagaatgactttgttcagtatcttacttctcagctgctcaatcatcagctgccacagctccactgttcttgcaaggttaggtctcctcaaatcaccatttttttctcacttacattactacgattttgtatataaacaacacgatggatgcagttgtattgggcaagagagagtacaacggaagcataggacaaggcgaattctcattgtgagttctgcatttctgcttattttcatcaagttgcattcaaatcccccttgttttatgcaaagaaaattttcagcatgtctcacactaattaacggagtatatctgtatatgtaatatgtgcgtagcccagttacgtcacttcgtgagagcatggtgatgctgctgtacaatgcagatagatcattaatatcacaagcaggtgtttttcagttagttcattgttcattttttctacttagccagcacaaatatgaactgctgcctgttttaactaataacccacaaatcaccacagaactgaagatgaaagcagttgttgagtcaggaactatggatgttgattttagtcttgacaatggaggaagcattattctaaggctgcagttcctactcagtgatgaagatcgcagacgggtccaagaaatggtaatgtggttctttttagggtattttcatgttagttcaaaccacaagtcctttttaattcattattataattccatcttaatttgaattatctagcttgtgtttatactgttttccctttattcagaggaactctgcagtgaaaagaaagcagcaagagctgctttctgatggttatgtactttctcaaggtaacctgtcaaactgtgttcaaattatgtctcatttttttgttgcaaacacgattttagggatctactgaacagactatatgcttcagatgtgccaatgttaagcagttaatgtcttagctaataagaacataatatttaatccacatatattagtatttaaatatatgtgagatgttgtataagttcccaaatatctgacctttgctgtgtgtagtgtacaattcatcaaactcgtatttaggctgtgtaactggaatgctaatgtctgaaatttaatcactgataaaatgtacaatttgtatggataactttcttttcttataggtgattttgaaaattttcagacagcttgttgtctaaacaagtcgaaaatatctccaacatttcgagagaaggagatgaatcttcagttaggaagagcatgtcactggatgatttgcaggagaaggctgttttctctgcaattattgtagatccccagatgaaagacacaaaagaatcaccggagcaaagtggatcaaatagtgcagtgcagaaaatgataagtgcctttcaaagcagctctccacaggtataatacttgtatcaatagatcaataatgcagggcaaaaccactcctaatatactccgtccgttcataaatatttgacgtttaggatattttgttaaatttttgaagctttgatcaacaatagtttctcaaatgcttggtttattttatttttttaaaaaaaatgatatgcacatttttgacttgagtactatcatagtatcacaaattcattagattttatgaacttattttaatacaaaatggattgacaaagtttcaaaagtttgaccaaatcttatcctgaacatcaaataattatgaatagaggaagtactagtacaatttatctacatagtcttccatggtcttgcaggatctgacgcggatcaaatcagaaagctcactaaaagggctgtctgcttcttcagagaatttcacccagtcttcttcagacaagtcatctagttcactagcaacccaggatgtttcaggccacacagaggcaggtcttgtggctgggacatcaggcaaaatgcagcttcctcctggtgacaaaagcttcagtaacaaaagatcaaatgcaaccgagcaacaggccgttctgtcaaccacatctgaaggcagaatccgtaggctattcagagagaaggacctcgataattcagagatggtgatcacagtccaaaaccggagcaagaagcggtcgatgccgaagcgtcgtcgcgccgccattggcccttactctcttgaacacatgcatccccatgtctgcatcaccactgcaagcaggcagctgagagagcttgttgagcttgagccacccttggattcgtttgtgtttgtaggacaagttgatatcaagagaccaaatgtgaggggaggagctagcatgcaagatcaggtatgattatgagagaaattttatgaatctagagaaagtatctgttggtactaaaattttaatgttatgagtctacagaaagtatctgtcggtactaaaattttaactaaaaaatttgatgcctcgagacactagtatctggagatatcaagttttacattagaaaatatagtacctctcgatgtcttctccaaaatgataaaattatccttaaactgatagtttcagcttagcctgctgatccctgaacttatgcactcccatgccaaacttgtgaaatgtgaagcagggcacaagcgacagtaaaacgaaaaatgagatggtttctgctcgaggtgatgatcatggttttccaatattggatgggcggttgattaatcaggcaagtcagttgtcgatgtgtgctgacattttctcctctttttctttcccctctctgactatctgaatttatgttgtgcagggagtgcgtgttgtcattgtgatcatagcttgcggagcaatatttctgaacaacagataagggtagcaggacatgtacatttagattgtgtgtgtgtgtttttctttttcaagtttcagtaagtaatgcaactgctatacacctccatccctaaaaaaattaacttccgagaatgaatctaaacaacaaagtgaacaaacgtgtgtccgagtttatcttagaagttgcctttttttttttaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0232200, RefSeq:Os05g0232200