Os05g0237400
| Gene Name |
Os05g0237400 |
|---|---|
| Description |
Similar to Viroid symptom modulation protein |
| Version |
NM_001061527.1 GI:115462784 GeneID:4338179 |
| Length |
3501 bp |
| Definition |
Oryza sativa Japonica Group Os05g0237400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:8389984..8393484 |
| Sequence Coding Region |
8390942..8391744,8392347..8393268 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:8389984..8393484 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:8389984..8393484 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggacggcatggatttcagccctcataaaaatagcacagaacagaatcgaaccagctttgaagaagatgatcaattcagcattcgatcagcaccctccaaaccatctccagacaagaaatcgaagcccaagaacaagccgaatcatcactccgacaagacggcgaacccgccgccgcagaggcccgagacgacggcggcgctggtgacgacgaccgcagcagcagcaacagcaggaacaaaccgtggcgaggccgtcagcaacggcagcctggacagcatcagcagcggcagcacacggagcaacagcctggagagcagcagcaccggcgccgcggcggcgccaacggtgctgacgacatcggcgtcgacggcgtcggtgtcggcgtcggggcagaacgtgaagcggcacaccggcggggacagccggtgggaggcggtccaggcggcgacggcgcgcgacgcgccggcgccgctgagcctggcgcacttccggctgctgaagcggctggggtacggcgacatcgggagcgtgtacctggtggagctccgcggcacgtcggccttcttcgccatgaaggtgatggacaaggcgtcgatcgcgagccggaacaagatggcgcgcgcggagacggagcgcgagatcctgggcctcctcgaccaccccttcctccccacgctctacacccacttcgagaccgacaagttctactgcctcgtcatggagtactgctccggcggcaacctccattccctccggcagaagcagccctccaagcacttctccgagcccgccgccaggttttacgtggcagaggtgctactggcgctggagtacctgcacatgctggggatcgtgtacagggacctcaagccggagaacgtcctggtgagggacgacggccacatcatgctctccgacttcgacctctccctccgctgcaccgtctgccccaccctcgtcaagtcctcctccgtccacgccaccggcagcggcggcggcataggcagcagaggagacgccatcgacggcggcgagagcatgccggcgaaccagggctgcatccagccctcctccttcttcccgcgcatcctgccgcggcgcagccgcaaggcgtccaagagcgacatgggcctgctgctcaacggcgcggcggcggtggagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtacctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctgggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgcgccacgctctgcaacgtcatcgagcagccgctccgcttcccctccgacggcggcgccagcgccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgccttcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgctcgtcaggagcctcacgccgccgtcggtgccggagccggtcgacttccggcagtacgccgccgccgcgtccgccaccactcccaaggacaagaagccgccggagaacgccgccgccgccgccgcccccgccgcggcggatggtggcggcgcggccaactcgagcaccggcgagtcctacactgactttgagtatttttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MEDGMDFSPHKNSTEQNRTSFEEDDQFSIRSAPSKPSPDKKSKP KNKPNHHSDKTANPPPQRPETTAALVTTTAAAATAGTNRGEAVSNGSLDSISSGSTRS NSLESSSTGAAAAPTVLTTSASTASVSASGQNVKRHTGGDSRWEAVQAATARDAPAPL SLAHFRLLKRLGYGDIGSVYLVELRGTSAFFAMKVMDKASIASRNKMARAETEREILG LLDHPFLPTLYTHFETDKFYCLVMEYCSGGNLHSLRQKQPSKHFSEPAARFYVAEVLL ALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVCPTLVKSSSVHATGSGG GIGSRGDAIDGGESMPANQGCIQPSSFFPRILPRRSRKASKSDMGLLLNGAAAVEFNA EPTEARSMSFVGTHEYLAPEIIRGEGHGSAVDWWTLGIFLYELIHGATPFKGAGNRAT LCNVIEQPLRFPSDGGASAVARDLIRGLLVKEPHKRIAFTRGATEIKQHPFFDGVNWA LVRSLTPPSVPEPVDFRQYAAAASATTPKDKKPPENAAAAAAPAAADGGGAANSSTGE SYTDFEYF</aaseq> |
| Gene Sequence |
<dnaseqindica>959..1761#2364..3285#gcagctttcaagcatggcaagacgaataagagacccttttccttaattttgtttgatcattccctttcagctttgattttcctggtatgacatgaagcattgttcagattatttgttgtctgaagcccttatcaagatttgattccaggtttgtatttccctatctgatcttcaagttgttttcttctgataatgaggttccccatgctgtggtaccggttttatttgatgttgatagccatagcctttcagaatttcctccataatgagtagtcttagcgcaatgcaatttcaacatcccttacaggattcaccatagtgcaaatgacctaaaagtttcgaaattatgagtttaatacatttaaagttgtaaaagcttgctaaatgttcagtttcaaattcattttagatttcaataaacaaagaataagcacaatcaacctaaactgttcatcaagtggctagcaacttgtcaaggaggcctgagagtagcagaacattttttttcatttctttttgataaatgaagctttcttaatctcagacaatttcatcccggtgataaaattatactaagactactcctaatttaagtttttccttttttttaaaaaaaatagattagattaaatccggcctctgcacctttgtggggtatatacagccaaacaaagtcacgagtacgtaagattttgccattacatgggaaaaaaaactaagtttaacagatccggaaagaagaacaaaagattaagcttcgattcttcttctaaaattccaaccaaaagtagagtaaaactccaagactcgttttcttcttcagttttacctgcattgtaatttttttttcattttccagtttttacactttcactcaaattacctatcaaattttgacattctgccctgtgaagtttcagattacctagaaactcaagctttcaataaactaacaacgatggaggacggcatggatttcagccctcataaaaatagcacagaacagaatcgaaccagctttgaagaagatgatcaattcagcattcgatcagcaccctccaaaccatctccagacaagaaatcgaagcccaagaacaagccgaatcatcactccgacaagacggcgaacccgccgccgcagaggcccgagacgacggcggcgctggtgacgacgaccgcagcagcagcaacagcaggaacaaaccgtggcgaggccgtcagcaacggcagcctggacagcatcagcagcggcagcacacggagcaacagcctggagagcagcagcaccggcgccgcggcggcgccaacggtgctgacgacatcggcgtcgacggcgtcggtgtcggcgtcggggcagaacgtgaagcggcacaccggcggggacagccggtgggaggcggtccaggcggcgacggcgcgcgacgcgccggcgccgctgagcctggcgcacttccggctgctgaagcggctggggtacggcgacatcgggagcgtgtacctggtggagctccgcggcacgtcggccttcttcgccatgaaggtgatggacaaggcgtcgatcgcgagccggaacaagatggcgcgcgcggagacggagcgcgagatcctgggcctcctcgaccaccccttcctccccacgctctacacccacttcgagaccgacaagttctactgcctcgtcatggagtactgctccggcggcaacctccattccctccggcagaagcagccctccaagcacttctccgagcccgccgccaggtcaggttccacttcggaattttaacaaattgtttccacggagcttggagcagtttgaggaaattaacctccgtcaagtttgaacaaatttagacagcagtaactttggtaccaggaggcagggttcactccatcggttaaccccttttgatcggaggtcaccgaaatttccaaaatttagttgaatttaaataaatattactaaaattaatgaaaaaattgaaaagtttaaaaatttcagccgaagtaatattgtattgtaggggaaatttccagccctggcaggaggtgctaaaatttgcagaataattttagaaggaatttgcacaatactaaccttattagttgcttgaaaaatcaacgagtgattttcctacgctcgaggatgtaccatgaagcacactattttctagtataaattttggtacatttatctatagtcatgtatcacgattgacaacaaaatatatctattgcctgtacctcatgtatcatcattctattgtagatttgatctgaaaattgaaacttgcgtccgataatttgatctaaaaaaaatatgaaacttacgtgggaaaatttgaactttgatgcgtcgtcaggttttacgtggcagaggtgctactggcgctggagtacctgcacatgctggggatcgtgtacagggacctcaagccggagaacgtcctggtgagggacgacggccacatcatgctctccgacttcgacctctccctccgctgcaccgtctgccccaccctcgtcaagtcctcctccgtccacgccaccggcagcggcggcggcataggcagcagaggagacgccatcgacggcggcgagagcatgccggcgaaccagggctgcatccagccctcctccttcttcccgcgcatcctgccgcggcgcagccgcaaggcgtccaagagcgacatgggcctgctgctcaacggcgcggcggcggtggagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtacctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctgggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgcgccacgctctgcaacgtcatcgagcagccgctccgcttcccctccgacggcggcgccagcgccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgccttcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgctcgtcaggagcctcacgccgccgtcggtgccggagccggtcgacttccggcagtacgccgccgccgcgtccgccaccactcccaaggacaagaagccgccggagaacgccgccgccgccgccgcccccgccgcggcggatggtggcggcgcggccaactcgagcaccggcgagtcctacactgactttgagtatttttaattagtactatatatttattcctgacaatattgttgtgcacaccagattgttttgatcgatggttgtgaagtatgagaactcgattcgtgataattaagttgtactaactcattcttggactatggtagattcattgtaaacctaaaattcatatgaaaatgtagcgatttcatttgattggtttgttatatgtgaacatctgttacttgttattgt</dnaseqindica> |
| External Link(s) |
