Os05g0160600

From RiceWiki
Revision as of 20:04, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0160600

Description

Peptidase, trypsin-like serine and cysteine domain containing protein

Version

NM_001061257.1 GI:115462244 GeneID:4337885

Length

9678 bp

Definition

Oryza sativa Japonica Group Os05g0160600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3539054..3548731

Sequence Coding Region

3539291..3539308,3539392..3539469,3539548..3539622,3539702..3539794,3539861..3539978
,3541257..3541387,3541469..3541741,3543197..3543310

Expression

GEO Profiles:Os05g0160600

Genome Context

<gbrowseImage1> name=NC_008398:3539054..3548731 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3539054..3548731 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaatgcagtggtatcgtggtcgattggaacaagaccagcaggttggcaacaatcgtaacttgctctgcagccgtgtgctttgatggtgcactagtccatcccaaccccaagttgctcgtacatttgcctaataggtctaccgcagaaggacaattgcttttcttcaatgcacactaccgtattgcattgttggaggccttggtggactttccattggagcctgctaattttggctctagtccaaaatttggacaaaaggtgtttaccttggcaagggacaagaagtcatccttctttgctaggtctgggacagtcctgttgcaggatccaccattttttttgaagtacaaatactggttatctctcagctctgcaattgaactgtgtggcactggaggacctgcgattgatgagcgtggcgatgttgcagggatgacattcggtcgtttgccaaatccggatgtcctctctatctctatcctgcagacatgcattgacatgtggaggagattcagtcgtgttgctcgcccctttcttgatatggacttgatagcctttgagacgttggatattacacaccaggaggagattgaatcggaacatggcattaccgatggtttcatcgtggacttggtgtgcgatgattccactgctgggagacttggtatttccaggggtgatgtcattgtttcatacaatggacttcgtgacttcactctgcatacgtttgaggagtaccttctcaatcttggctggggttttcttgagagtacagatccgagctggacgatcaatttagagcttgagatatatgatcctgttagaggtactatcagaggtgttaccttccctctgggattttctgatatttgcgaggatgtccttgtactgccatga</cdnaseq>

Protein Sequence

<aaseq>MQCSGIVVDWNKTSRLATIVTCSAAVCFDGALVHPNPKLLVHLP NRSTAEGQLLFFNAHYRIALLEALVDFPLEPANFGSSPKFGQKVFTLARDKKSSFFAR SGTVLLQDPPFFLKYKYWLSLSSAIELCGTGGPAIDERGDVAGMTFGRLPNPDVLSIS ILQTCIDMWRRFSRVARPFLDMDLIAFETLDITHQEEIESEHGITDGFIVDLVCDDST AGRLGISRGDVIVSYNGLRDFTLHTFEEYLLNLGWGFLESTDPSWTINLELEIYDPVR GTIRGVTFPLGFSDICEDVLVLP</aaseq>

Gene Sequence

<dnaseqindica>9424..9441#9263..9340#9110..9184#8938..9030#8754..8871#7345..7475#6991..7263#5422..5535#tcgtcggcatttcctccaggatacctggtaaaaagattgctgctaacgatcaatttcaattacaatcccctccaattaccagctgcttctttttttaagactaggaatcgtgcacgtgcaaggcacgtttaaaaatttaggaagtacatttaaaattagaaggtataataaactgtcagaacaggcataatcatattttctgaacattcttgctttccatcatctattgaattgaaaaggttgttaatgacagaaatagccaaaagcaaaaaaaaaaaagtcatttcacatagcctcgtcaaaagactaaccacagtaaggatttcttttaaagaaaaataactttagttaaagggttgccatgctttttccatatagatgaattgctatgtataagaaacatgagagattcctggcacaagaacagattagagaaaggcaaccgaataagaaaacaattcaagagctacaatggtcttctatattcaacaggattgcttcaaaaatctatttatcattgtaacaaatagtggaagaacattagattgatatcgctgatatcttaaagcgagaagatacataacacaacattctttaaattgaagtagccactgacactaattatatttgataaatagtaaacattacatagcataaaccaaaatccatactgtgatagtggtgcaaaatattatttattctaaaggcgtaatggagctgcaaattattgagtagtgcacatttttcctacaaccattatgcctaaggggtggagggtatatcaatgactccaactcttggagggatggtgaattccttcttgctcgtgcgctttcttgggcaaagtagagagagggagggagggagggagggagagggagagggagagggagagagaggcccctatctcactgcattacttctctcacaaaaaaatggaacctgctctgaaatggaaaatggaaatttctaactcaagaatttactggagaacagtcgaacccaccaatgtgaacttaggttactatgcaggtacaaatgcaagggcagtggacacaacaactgttgttttttattagttgcattcgatcagaatgatggagcagcaggatgctctgggtcgtctggttcaaaccttccatacattgatctctgatttctgatttgaatttaaaataagtataaatagacaagtgacaaccaacccgagaggccaagacattcctttcagcacagtccacatgtggattagaggaccatgggctgaaatatctactgaacatactgatgctattcactttagtaccctcaataagttcattttgccttcagaacacaatatgttattcctgtagcaaaacaaaagaatcaggatcaccaatatataaaaattgttcgatcctatgtagttatgccctgaacataatgaacaacgatgacggactctggacgcaacatctcccaatgaattaggggaataaacaatagagggatataagtgatttcagggttacttgtccacaacaactgatcgggtatcagaaaatagggcatatttgtttcagccgagagacccctgggggtctagttttaaggcgagtaggcctattgagatgcacataagtaccttttttcatcttatcaccccgcctagtgactttgcaagcattgcagggtgtaggttagccaattaatatcatccttttttgtgaataaatttgtctttggatccactcaaaccaaaattctaagagtttggtccttggataggttcattgtgaaggcaagctaggaaaaaaaagatcaccataattctatcaattcaccaccagttgcccgttggaagcattttaagtcttggtaatgaaaagtcagccaagcaaaagtggcagttggctataaacattcacccagggagaagaaggccatatgtggaataaccaggcaacacagttatcggtgtagatagcccaataaggcagtcatagacattttcccgtttaaatcagcttttatcattttacccattctgcacaccaaccaagcactactcaagtttcctttattaagagaagtgatcttcagcaaaatttcttgtttcaacagcaagtaactacgggtcactcataaccttctaatcctctattcaagtttcctttattaagttcagagaaaaaaagtatatgaactatgagttgtttcgttaagtatggcaaactaaattagcatccaatcaaaatgataaaagcatgctatacatgacatcaaacaacaatgagaagctgtacacaataatctccctcgctcaatttatccacgctatcgctgctactgtacctttgatgagagagacactgggaagagaactcacaggttgaggtttttggatttatagcagctgccggtcttgtacctttcctgcttctccgtcgcgcaggaaaaaggacaaaaggccaccgacttcttctcagattcattgttcgcctcctctgggagaagtggcagcggcaagggtggatgtgtcggcagcagagcggaccaggatggaaggattggcggcagagaggtccgggacggcggcatcagcagtggagggcccaaggggaacactgggccatcgattacggtggagacggagatggagcagccccgccagctgaagggcagaccaccacggctgggaaggatgcaagaagtgtcgtccgcggcgggaggagttgatttccggcgattccgcggctgtagagaatgcgagaagtgtcgtccgtgggcgagactgcgagaggaatcgatttctggtgattccgcggctggaggatgtgatttgcaacgggagaatgcgatttccggggagaggaggcgtgcggcagactgcggatgggggatgtgcgcagtggttggaggatgtgtcgtccgggaggaataggcggcagcgttattatcgtgagaggactacgtgatgcagcgatgtggtggtgaggcatcacggcagggtcagcgcgtacgcgcgtggctgcggtgggtcccgggcggtagtccagcggaagggggaacacgtgagaggaggggcggcagcgagtagcacagcggcggcggtggcatagcgcggggaaaggggggcagagtaatcaggtcgggcacgtggaaagagcggtggtgcgggcgtggatagcgcgaggtcgcccaagatggattcagtgaaagatttcagcggattaatggataagattattttacctggtgaatggatggatgagatgagttgggatgatttggcatgtaggattggagggatgcaactcctcctttttatattagtatagatatcaacaataatgagatggcctattttagtaactccctgttacacatttgccatgaaaatagtgcaacgttagagcaaaattgcttgacaaacacttgaaaagctgaaagcaagagatttgtctttcagtgggattgaagataactccactgtctaaaaaaagaactatgatatctgttgataagcagatgaactccactatctatacaatggttttcctacaaccacaaggacttcatatgtgctcttctcacattgcaatcgaaataacatttatatgatcacaagaggaaaaatacctgggaatgaaacttcagagagttcttgtcgacgaacaaaagaccatgcagatcgatcactttactttagatctttgaataatcacgcacctttttgcgccactggacattttatatacataaaaaaccttatttatgataaaccagttcaagtatgaactaaattaatttttcaacttcagtagacagtgagttacctcaagaacatatgcttgtcttgagggctattatagcagaataagtaccataagtatgaactaaattaaattttcaactttagtagacaatgagttacctcagaatatatgcttgtcttgagggctattatagttgaataagtaccatgaactgcaaaaaatactaaaactttgttcaaaaccaacaactgcaaccattgcaccatggagcccattctccaacgaaaggagagacaacagtgaataactaacctacagtggccataaaagattatcaagtacaacctttgccaagatgtagaaatggtatactaatttattttatggaaaaagaaacccaacatgtcttcaacatgtcttcctaggcactctgacattttgtctaaactgtgcatgtttctccatagctagctatgggaggtccatatcttctctcagaattcatgaaagtgcatatctgaagacatttgtttctttaatgctcaagcacatgtattcataggaacaactcacaacaattgagatatcagcttcattaacaaatttttttgatacaacagttgcccaaattgagacacaaagaagtacctgcaatacacaacattagctcaggaggcccttgtcctgattggcttcctcttaattcctgaagcccgtttgtggatgtcatgctatattcaaatttccagcacccatggaacttgctggatatttcactcaagaatccgcatggccacatcaagccccaaatgcattttcagatacaaaatatatgtcagtccatagggacagaactatagaggaaaaaataatttgtaaatttgcaaagtagaacctgatgccatgaagattccatcaaccatgcaattaacctacttataggaaatcaacctccaacatggatacaggaacatgtatccagcagtatcgtctttagtccagaggcattgcgagggatggtatgatgttgccattgcaccctgctatgagatcgccttctcctgcctacaacctgagaccactgaccagtggagcaagagaggatggatctaaaaaactaaatattgtttccattagcagactaacgaacgaaagcttatcttcggcgaaaggggggaaccacctcggcggcggcggcttgcagcagcggtggagtgcggcggtggctggggatgacctcggctcaggcggggcagtagcggctggtgacgaccttggctccggcggggggcagcagcggctggtgacggcctcgactccggcgggggcagcggtggcggggacacgcgaggaggagcgagtagtggacggcggaatcatctcgcgggggcggagtaaacacgcggtggagggagtgcaggcagaaatcgcggtggagggagtggaatcggtgagcggtagccggtagggacggttgtgatgcgtgcaacgtggatggacggtagggattgatagatgtgatttggcctataggattggaggggtacaactcctttttatattagtaagtataggtaaaggaagcttttattcagatcaagataattatatttcttaccagctactaattcttcctatgttttcagatgggaaggagattatgcaatgcagtggtatcgtggtcgattggaacaagaccagcaggttggcaacaatcgtaacttgctctgcagccgtgtgctttgatggtgcactagtccatcccaaccccaaggtatgcagaaaacaaacctagctggattgattaatggtaacacttggactatgaaagttctctgtaaattccccttcaaatcttaataatgtttggtcagcctcttccaagactgaaaattaattaacataggatagatatgtttgcacaatagcattccagaattaacccttgttctttagatagctatgggtcctacataaactagttgacaccccgcgggttgcggtgggcacactataaaattttcgaagtgcataaaattgatgcaaattttggtcatcgaatcagcatatgaaaaaatagagatttacagtgttgagatagaaattgtgtctaaatgttcgtttttcaattaggaaagcaaccccaattctcatggttcctgacattctagcaataccgggctggtcgatttgctggatggctgcgaagatatgttaggtgtaaaatcaggattaatctcatggcaatatgattaattgaaaagttcaaaagtttatagaacatataaaaagttatctcaccttcagcagttatcccaaacgaaccttaatggttgccttcatctgataatctaggctacatgcaggccttatttatagcaactccaatctgtattccaagaaatcaatatattttgaaactgaattcatactgaaatttgtgtttcgaggtcggtagagataattgacatttgaaggtgaatataaaaactgtacaataggaaagctaaggccaatactgcttctttactgaaacaaatctacagcaagcaatgaaagagagaggaagagtgtttattttttttaccacttcattaaggaatgatatataccaattcgatgaattgttgcaaatcctattggacggatacctgtgaaaataggtagaaaccaattgattaactaatagtccttgtcatatatcaggatgaagaaaaatctagcaaaatcaaccacctgattggaacatgtacaaagcaaaaagaaaacgattagtgagggttaggagcgtgcttttttttttccccacaaggaccgctgtgggtatggagcgtgggcgaggtggggctgcgccaatggaaaacattgatggggagctggcccaagatatcaacaccgttgatctggaaccatgaagaccaatccaaatgtcgagaattaacgatgacgtggtgcaacgtattgcaagctttatagtattaattgctatagtgggtactaactatataggaagaagggatggctagcatattatgactcggaattaagagtatatttgcataggaagcatgagaggggatagtacatatgtttattccgtgttcttattatctttttctgaattgtttaattttgtcttttcattcttattgtttcaactgtgctattcctgttcataatctttattggatcacatgattcaaaaccatgtgatcatctctttttgcagttgctcgtacatttgcctaataggtctaccgcagaaggacaattgcttttcttcaatgcacactaccgtattgcattgttggaggccttggtggactttccattggagcctgctaattttggctctagtccaaaatttggacaaaaggtgtttaccttggcaagggacaagaagtcatccttctttgctaggtctgggacagtcctgttgcaggatccaccattttttttgaagtacaaatactggttatctctcagctctgcaattgaactggtataaggattattgttgttgcagttttttatccattcccactttcttgcctatttagtttgtgttatttctttgatgcagtgtggcactggaggacctgcgattgatgagcgtggcgatgttgcagggatgacattcggtcgtttgccaaatccggatgtcctctctatctctatcctgcagacatgcattgacatgtggaggagattcaggttcattaacaatctcttttattattgtattgtttctactattcttttgatgtctataaaattgtggcatgttgggtaggttaacttcaaaatttagataatatttagacatatgtttatgttggtattgaaaacatataatattacaatcctaacacgagtgtttaatcagcggcgaagccatagccccctgccccccgcattagcagtggcacatgtcaatctaaggatttaatggatattacaagtctcgtgtaacattattttacaataaaatatctttcttaaactgaaatcttcttgctgtagcagtgacggcgtcatcagtgtctcgccaaaactctgaccatgtcatacgatgaatctctagagaaatcttggcaccccaaccttcaaatcgtggctttacctctgtacagtggcggacccaggatcgaaatcctgggtgtgcccacgtcaacctcaagtgcaaaaatcaatgtccagtgcttataaataccatgtgatctcaagagcaaaaagtcaaagttttagtgcacataaactccctattttccttcgcatatagttgattggttcaacttgatctctccctacaaataatagaaaacacaccttcaatttaaactctcactaattttagtttttaatttttcaatcaatctctgtcacctccagagagaagagagaagatatcagtatgataagagagattgagagaaaaaaaaaagtaagaatgtaaactaggacggctggacagggaagtcctagccacttcgctggtcgctatgagcctgcgacttctgccaacttcccatgtagccatggcccatgacagaggttcttgggctttgatttctgccagcttgtttgaggcaatgaagcaaccatccaatgtctaggtccattgtgcatactactcgctattttttccccaaaaaatgtgggtataccggtgtctccactcctgcccctgcctgtgtactatttcactgtcctatatgcatagaaatattcaatgcctggctctttaatattagctacttatgtttaaactttagttgttatacttggtatactttgtaagaaattccacaaattcttgacggacacataggtgtggcatataatattagcgaattgtctttgtctttaatagtctgtgtagctctcttttatatcttgcagtgtagttttatgtgttcttatcaaacattttaatatcttcaaaataattccttgtcaaaatttgaagttagtgaatttggcttatttcagtcgtgttgctcgcccctttcttgatatggacttgatagcctttgagacgttggatattacacaccaggaggagattgaatcggaacatggcattaccgatggtttcatcgtggacttggtatagatatattcgttttacttcagttttcagaaatatatatttaaattattttgaactttttaggtgtgcgatgattccactgctgggagacttggtatttccaggggtgatgtcattgtttcatacaatggacttcgtgacttcactctgcatacggtacaaagtttatgattgttttcttagttttgaaaggtgcaaaacagtattgcttatatagtgaaatttttataagcagtttgaggagtaccttctcaatcttggctggggttttcttgagagtacagatccgagctggacgatcaatttagaggtatatttcatagtcttcttggtgttgagaatattgaaactaaccactgaaaatataatatatatttttttcttgtagcttgagatatatgatcctgttagaggtactatcagaggtgttaccttccctctgggattttctgatatttgcgaggatgtatgtaacattttatcttagtttattgttttatgtgatatatttttttaaaaaataaactgacaaacttgtgaaaattttaggtccttgtactgccatgagacagctgcggcataaatcgtcaaagcaatgtggctaactgtcgctatgccatatgcctttttttgtggcaattgttttgtgatgtcatatattatcttttttttttctggtgagatctgtaaccagaagaacatattgtgatattgatcctttttttgttatgcggtagggctgtttgtgacttgcaaggtttctggtggccacgattacaaaactgaaaaaagatgaaacatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0160600, RefSeq:Os05g0160600