Os05g0238400

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Revision as of 10:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0238400| Description = Harpin-induced 1 domain containing protein| Version = NM_001061530.1 GI:115462790 GeneID:4338182| Length = 1291 bp| ...")
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Gene Name

Os05g0238400

Description

Harpin-induced 1 domain containing protein

Version

NM_001061530.1 GI:115462790 GeneID:4338182

Length

1291 bp

Definition

Oryza sativa Japonica Group Os05g0238400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8461566..8462856

Sequence Coding Region

8462026..8462727

Expression

GEO Profiles:Os05g0238400

Genome Context

<gbrowseImage1> name=NC_008398:8461566..8462856 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:8461566..8462856 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccagatcgccggagccgccgcgctactacgccgccgcgggctaccaccgcccctcgcccttctcctccgtggcggcgtcctgcgtcgtggcggcgctgttcatcctgctcgccgcgggcggcgccgcggctgcgctgttcctgctctaccggccgcaggcgccggccatcgccgtgacggccgtgcagctcccctccttcgcctcccgcaacggcaccgtcgccttcacgttccagcagctcgcctccgtccgcaaccccaaccgctccccgctcgcgcactacgacagctcgctccgcgtcgcctacgccggcggcgaggtcggctcgatgtacatccccgccggccagatcgacggggggcgcacgcagtacatggccaccagcttcaccgtcccggccttcgccgtcacctcctccgccaccgccgccgcttcctcctccccggcgcagacaatcaccgtccccgcctccggcccctcaccggcggcggtgggcgcggtggcgctgcagcaagaacagccgccgccgcagcagcagcaggtggcggcgctgccggtgatggaggtggactcgctgctggtggtgaaagggaaggtgaccatcctccgggtgttcacccaccacgtcgtcgccgccaaggtgtgccgcatcggcgtctcgccggcggacggccgcgtgctcggattccggtgctga</cdnaseq>

Protein Sequence

<aaseq>MARSPEPPRYYAAAGYHRPSPFSSVAASCVVAALFILLAAGGAA AALFLLYRPQAPAIAVTAVQLPSFASRNGTVAFTFQQLASVRNPNRSPLAHYDSSLRV AYAGGEVGSMYIPAGQIDGGRTQYMATSFTVPAFAVTSSATAAASSSPAQTITVPASG PSPAAVGAVALQQEQPPPQQQQVAALPVMEVDSLLVVKGKVTILRVFTHHVVAAKVCR IGVSPADGRVLGFRC</aaseq>

Gene Sequence

<dnaseqindica>130..831#atcgcttttccgctcgtgtcgtgtgaagcggtgaactttagccgactcctgactagcgactaccctcccactctctcagctcgcttcccttcctcgcctcgccggccaagaaccaccgcaagattcgccatggccagatcgccggagccgccgcgctactacgccgccgcgggctaccaccgcccctcgcccttctcctccgtggcggcgtcctgcgtcgtggcggcgctgttcatcctgctcgccgcgggcggcgccgcggctgcgctgttcctgctctaccggccgcaggcgccggccatcgccgtgacggccgtgcagctcccctccttcgcctcccgcaacggcaccgtcgccttcacgttccagcagctcgcctccgtccgcaaccccaaccgctccccgctcgcgcactacgacagctcgctccgcgtcgcctacgccggcggcgaggtcggctcgatgtacatccccgccggccagatcgacggggggcgcacgcagtacatggccaccagcttcaccgtcccggccttcgccgtcacctcctccgccaccgccgccgcttcctcctccccggcgcagacaatcaccgtccccgcctccggcccctcaccggcggcggtgggcgcggtggcgctgcagcaagaacagccgccgccgcagcagcagcaggtggcggcgctgccggtgatggaggtggactcgctgctggtggtgaaagggaaggtgaccatcctccgggtgttcacccaccacgtcgtcgccgccaaggtgtgccgcatcggcgtctcgccggcggacggccgcgtgctcggattccggtgctgaccaagaccaggccaagatctgactctcctccatttgcccattttggggttaatcggtggtgtcccctgtcaatctcttcagtgaattcgtgtcaaatttgtaagataagttagtttgatttgtaacttagaattcttcttctttctgtgatgattttctgagtgtgtatttttctcttgaatcttctcatctttggtagatttctgcagccttcttgttgtaattttaatagattttctaggtgttttcagagtccaggccaaagaaagatttggttcttgagatgttcagttggacaatttgttttgctaagcaaccatagtgaggaaattaaagcttataattacaatgtattatcaaaattatgttttggacttgtaatcttatccattcttgcagaataattgtgacatttttgcatcggaatcagttccagttagatgcttatgactttggatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0238400, RefSeq:Os05g0238400