Os05g0167600

From RiceWiki
Revision as of 20:05, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0167600

Description

Conserved hypothetical protein

Version

NM_001061286.1 GI:115462302 GeneID:4337920

Length

2397 bp

Definition

Oryza sativa Japonica Group Os05g0167600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4054054..4056450

Sequence Coding Region

4054147..4054197,4055178..4055765

Expression

GEO Profiles:Os05g0167600

Genome Context

<gbrowseImage1> name=NC_008398:4054054..4056450 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4054054..4056450 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagccgcatgaaccagccggcagcgagcctagcgaaaatgttcagaacatcgaggaagacaatgagtacctgaacaacaagcgcgggtggctgatggcggtggccacgctgttcgtgggcatggcattccaggcggcgatacagttgcctgcctggttccccgatgactggcctcaggcgtttagctcccacaacatgaagcatagcggtataatattccgagccacggtcgcctctgctccttccccgataagtcctcaacaacacgccgccaccaccctcaccgagggccaaatgagggggatacggtggtatatcatgttcaacacggtgaccttcacgattgccctggcgcttctgatcacgctggtggcggtagggaggtccttggctagtcattccatgagactcatgaatgccatattgttcacggtgatcattagcaccagttgcacctttgtcttggccatctcgagtgattggactgtcatcaggtggatgttacctgtgcttttggtccttggctcctataccctctttatcagcttagtatggcccaagatcatcgagtatcggaaggaaaagaaaagacagcgagaggctcaatcgaacacagcatcgccgccaccttaa</cdnaseq>

Protein Sequence

<aaseq>MDQPHEPAGSEPSENVQNIEEDNEYLNNKRGWLMAVATLFVGMA FQAAIQLPAWFPDDWPQAFSSHNMKHSGIIFRATVASAPSPISPQQHAATTLTEGQMR GIRWYIMFNTVTFTIALALLITLVAVGRSLASHSMRLMNAILFTVIISTSCTFVLAIS SDWTVIRWMLPVLLVLGSYTLFISLVWPKIIEYRKEKKRQREAQSNTASPPP</aaseq>

Gene Sequence

<dnaseqindica>94..144#1125..1712#agaacaactgcagctagcgcttctatctgaaactctgaatatacacggatatttagggagtagaggagtgcagcaagcgcgcacgggcagaccatggatcagccgcatgaaccagccggcagcgagcctagcgaaaatgttcaggttctgtttgcaatctagtagtatcattttttctgcttgattggtctaaatgttaagaagattccctcaaaaaaaatgttgacaagaatttttttttgtttcgagaatgtgcggaagttttagtctttgtcagcagtgatagtttaaaaattatgatgtcgtcaccaatggtcgatatagatggcttgtttttgttggtagtgccctcttttaaactcaattacctgtatataattagaaattgtgatatcttcctacctacagctcttcaagggctgccgtgagaaaaaaaaaacttgtttgagattgtgttcagtttgaagtagtataaaaatgaattaaagaataaatttcactaaactagtactttgataaaattaacacaaaactacatatttaaaccatagtatcatacaactacagatatagaaataattttatcataaagctttacatttaaatcattgtatctcaaagcatagatttagtatcgtctttttcaaaacaaattttagatgtgctatccctacacctcttaccattgtaaaattttaaaatgtgtagttttgcgtaaaaaaaaaaacgatgatccatctgtagttttgtgaaggaaaaaacatgacactcaatttctaaagtatgttattttctaattaagatgctgattttacctcggttttcgttagcacgtttttcaaattgctaaacgatatacttcgtgcgaaactttctatataaaagttgctttaaaatattaaatatatttgttttttaaatttataataattaaaactcgattaatcaagcgttaaatgctttctcgattggcgtaccctaactttatcttcatcttaatctatctcaaatactaaatttgtagtcttgtgatactatgacttaaataattaagtactatatataccaaatttcatgtttttttaaatataattctctcaaacattccttggtttggtgcgaagaacatcgaggaagacaatgagtacctgaacaacaagcgcgggtggctgatggcggtggccacgctgttcgtgggcatggcattccaggcggcgatacagttgcctgcctggttccccgatgactggcctcaggcgtttagctcccacaacatgaagcatagcggtataatattccgagccacggtcgcctctgctccttccccgataagtcctcaacaacacgccgccaccaccctcaccgagggccaaatgagggggatacggtggtatatcatgttcaacacggtgaccttcacgattgccctggcgcttctgatcacgctggtggcggtagggaggtccttggctagtcattccatgagactcatgaatgccatattgttcacggtgatcattagcaccagttgcacctttgtcttggccatctcgagtgattggactgtcatcaggtggatgttacctgtgcttttggtccttggctcctataccctctttatcagcttagtatggcccaagatcatcgagtatcggaaggaaaagaaaagacagcgagaggctcaatcgaacacagcatcgccgccaccttaatttattttcaatgttcaggatctcttaatatcctaggtagtgttagtgttacaaactcatcactatcaaggtttatccctttgagaactgatgtacgtaacatgggatggtactagcccggagatcgagccttcagccttggatatgaatttgatcaagatgtgttgtcttacaaataacaggaaattcgcatggatgtgcatgatgcaaatgtagtgaatttatacttgatttgaacgtttgatgtcggcgatggttttgacagtgtttgagagagcactgacagtattctaccagaggtcaccggtcagaccaagagcatgtactacagagtttctgtgaattggagtattggaccaatcatgcaacaactttgtaaccgagaaacagggattgaggccatgggccattgcgttggatgatgattcaggagcctacagattggctctagactccacctctctctgaatccgccgccggtcgatgatatgcaaaccttggatgattgaatacagtttggtacaccttctcattctgccaaactcaaactcaccatgtacttcacctgctctgcgattgtaacttgttctcgacttcatgtgacagtctagctagttcagctagatatgatattgcagttttggcaaggaataccaaactagtaacagcagaataattataaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0167600, RefSeq:Os05g0167600