Os05g0239100

From RiceWiki
Revision as of 10:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0239100| Description = Conserved hypothetical protein| Version = NM_001061531.1 GI:115462792 GeneID:4338184| Length = 2211 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0239100

Description

Conserved hypothetical protein

Version

NM_001061531.1 GI:115462792 GeneID:4338184

Length

2211 bp

Definition

Oryza sativa Japonica Group Os05g0239100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8486695..8488905

Sequence Coding Region

8487928..8488162,8488629..8488663

Expression

GEO Profiles:Os05g0239100

Genome Context

<gbrowseImage1> name=NC_008398:8486695..8488905 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:8486695..8488905 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacgtcaaaactattgctttcccctgcccctgggctaccaattgctatttctgtaagaatctccatggcattttcctgaagttgcatgggataagttgcattttggccaagaatccccaacaagttgcggaccgcgtcctcacaagccgagatatcatggcatacccttgtgccagcttctccaggagcactgatgagcagcctcaccagcttcagcaaaatgctcagtatatcaacccatgcattgtcataatctgtgtgaagtaa</cdnaseq>

Protein Sequence

<aaseq>MYVKTIAFPCPWATNCYFCKNLHGIFLKLHGISCILAKNPQQVA DRVLTSRDIMAYPCASFSRSTDEQPHQLQQNAQYINPCIVIICVK</aaseq>

Gene Sequence

<dnaseqindica>744..978#243..277#cttagacagtcagctgtgtttttgttatttgcttcgattatcttcttgagcttcttcaccagtgctgcatccactgatgtgacataacaaaatacatgtgcatcaaccattttgttgcatatcaccacaagaagggacatcagagctgctagaaatttcgtttcttcagatagctcatcatttttcggaacccagggcttcttcggaccagattgttttggaggcttgctttcttcatcgttatgtacgtcaaaactattgctttcccctgcccctggtacagtttcctcctttatttccattttactaattagatcaagtatctgcaggaataataatatattaacagtatacttataatcaagtgtcatataactgcatttggttaattcgtgttaatggttttagtaaaagaaaatagtagaagtttaccattctcaacagtttaaccacacatagctctgatagttcattgtacctaacaaaatggcaacataagtgctccaatattgctgccgcacttatctggcactccttgtcttgaacaagtatatcaatgagttgagcaacaactgtatcattttcacaaaatacatccttgacaaatacctgcccatttgcaccttgagcagaaagcagttttgcaagttgttctcctgcttttctcctcaatctgcttgttcctctgttggaaaggaagatgcaccacagcttcctgatgaaatcctccgccatgattgcagggctaccaattgctatttctgtaagaatctccatggcattttcctgaagttgcatgggataagttgcattttggccaagaatccccaacaagttgcggaccgcgtcctcacaagccgagatatcatggcatacccttgtgccagcttctccaggagcactgatgagcagcctcaccagcttcagcaaaatgctcagtatatcaacccatgcattgtcataatctgtgtgaagtaaagcaggagaagtgattggcgcaatgatcttggtaagcagccgttggttgcagcagatctctctgcagttttggtcgtcacatgcgagcctctcaagtatctgtaggccctgatgaatcaactctctagtgccttggggcttgaaggagctcttgtcatccatcgtcccaaataagaatttcttcgctcttctgtccatccttagaagcctgtcagttatctgctcatctattgcagtattcatgttcttgtctttttcttcttctcctccttccttgtcttgatcctgtttctgtggacctttttcaacctcttggcagtattgtcttagtggagatacttgaagcagagaagatatgcactgcagggcacctggtatctgaacaatgtgtaatgcacccgtggcaacatctgccacgatccttgcggcgcgttctctcatctcttggtcctccagtgccgggtcagtccactgaagcattttgatcagattctggatggattcgctggaggacagtagctccagtcttatggatggcctcttgttgacgacgaatgcatcaagcatccgtaaaccatccagatgatcatcccgggacacggatttcagcaatccgacagcatatgtgaccatgttccagccaccgggcaagctcagatcatctgcacacttggctttggtttctcggaggtattgaaggagcaatttttggcccccaaagtccttgttaaggccgaattctttgcttgccgacttggacaacttctcaaggaaatactgaagcaggaaccagcagtagaagcacacactatgagccagagctagggagtaaaatatgaacaaggctgctctgagatttccattgtcatcaccataatcgtgccgtattaggcgggtcattgagatcaccatggatgccatcggcccaagcatattgatgatcagcacagcttcaattaaaagtgcgaggaataccactactatttgcgcgagcaccatcagcacaataccacacatcgaactgaacacgaaggcagcagtggaatgctttttcgcagacttttggaaagccgtaaaggtttcaatcatactagttgtggagttcaacactgcctcaacactctcgatgctgtaatcgtggacggtcaagaccctgttgcattgggtttagcgaggaacatcattagctatcaatcgtttttcttcaactgttatatttgatcgacatccaac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0239100, RefSeq:Os05g0239100