Os05g0189900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0189900 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001061382.1 GI:115462494 GeneID:4338022 |
| Length |
1855 bp |
| Definition |
Oryza sativa Japonica Group Os05g0189900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:5490491..5492345 |
| Sequence Coding Region |
5490771..5491155,5491911..5492278 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:5490491..5492345 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:5490491..5492345 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgacggcgaggttgctcctcctcctcacggtggtggcagcggcggcgggctcctgcttctgcagcggccaggaggcgaagccaccgacgccgccgccgccgccgccgtactgcggcagcgtgaggacggcggtggaggcgcacaacatcatcgggtggaagacgcttccggcggattgcgccaaatacgtcgccgactacatcaccggcgaccgctacggccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctctccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctccaccgtgccctaccaggctaagcatggctacggagttcagccatacgaccacgcgaacttcctccagtacgtggctggagggagcgcaccggcattgcaggggacgctgcgactctaccaacggctgctccagctcggcatcaagccggtgttcctaaccgaccgcaccgaggaccagatagccatcaccacccacaacctcctctcacagggctactctagctgggagaagctactgctccaaccgattgggctccagacctcaactcaagcattcaagacaagtgagcggaagaagctagtggatgccggctatgtcattatcggcaacatcggtgaccagtggagcgacatcctcagatcaccggagggttgccgcacctttaagtaccccagtcccatgtactacgttgcctag</cdnaseq> |
| Protein Sequence |
<aaseq>MATARLLLLLTVVAAAAGSCFCSGQEAKPPTPPPPPPYCGSVRT AVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESLKLSGSGKEVW VFDVDETALSTVPYQAKHGYGVQPYDHANFLQYVAGGSAPALQGTLRLYQRLLQLGIK PVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQPIGLQTSTQAFKTSERKKLVDAGYV IIGNIGDQWSDILRSPEGCRTFKYPSPMYYVA</aaseq> |
| Gene Sequence |
<dnaseqindica>1191..1575#68..435#acagcctcctcgatcacacacatctcctctaaagcagctcacagctcaagagaaggagagggcaacaatggcgacggcgaggttgctcctcctcctcacggtggtggcagcggcggcgggctcctgcttctgcagcggccaggaggcgaagccaccgacgccgccgccgccgccgccgtactgcggcagcgtgaggacggcggtggaggcgcacaacatcatcgggtggaagacgcttccggcggattgcgccaaatacgtcgccgactacatcaccggcgaccgctacggccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctctccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctccaccgtgccctaccaggctaagcatggctacgggtacgtatatatactcaaacactaggtaaacttgtttttttattatcaatatttatcccatcatatttttcatgaaaaaatagtcatgcaattacattgtaaatccctaaattatatatttacttttaatgtatttaaaaaagtcccaaaaagtgtgtcgacataattatagcaaccgtatttttatcttgcataaaattttataattatttccctctaaaaaataataaacctaaattctaatataaacctaaattctaattttataaatataagtgatttactattttatttatttcactccaaataacaattagcaaattgtaattatatattaactctttttcaatcaaagaggctatagttaatactcaaaaatatccaacaaacatatatgctatataattagatttttaataatgaccataatatcaacaacaatgacccgtatgagaaaacaccgacgttgtcatggtagtgttgtggatgcatgactcctccaaaccgtgattcgaatcctagtgcctacaaatattacatacatacgagtacatgttcaataagaatttaatgcgtaattaagtgactagctagcacatggtcgctgtcactctcatgggcatgttagtgtaatgtacctgcgtagtggtgtatttgcgcttggatctttcatataataaaaagaagtaacataaatagcacgttgtactactggttggcgattaccatctttaaatcatcattcccctttctagagttcagccatacgaccacgcgaacttcctccagtacgtggctggagggagcgcaccggcattgcaggggacgctgcgactctaccaacggctgctccagctcggcatcaagccggtgttcctaaccgaccgcaccgaggaccagatagccatcaccacccacaacctcctctcacagggctactctagctgggagaagctactgctccaaccgattgggctccagacctcaactcaagcattcaagacaagtgagcggaagaagctagtggatgccggctatgtcattatcggcaacatcggtgaccagtggagcgacatcctcagatcaccggagggttgccgcacctttaagtaccccagtcccatgtactacgttgcctaggtgggccaccaacattattgctagccagctagctatatcgatggatgcaagttcgcgtgtgtttcatttacttaatttcttgtcatcaaatattcttagctcgcggttacttactctttgacgtgtatgctggatttccttcttagtttgctttgtgagagatgagatttaaatttgtaataacgctggagttggctatttcattgatcattgtattatgttgcctggttgtaattattgatcaatggatcaagcagtaccttacattaaaatattcact</dnaseqindica> |
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