Os05g0242000

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Revision as of 10:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0242000| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001061539.1 GI:115462808 GeneID:4338194| Leng...")
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Gene Name

Os05g0242000

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001061539.1 GI:115462808 GeneID:4338194

Length

1519 bp

Definition

Oryza sativa Japonica Group Os05g0242000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8651787..8653305

Sequence Coding Region

8651838..8653172

Expression

GEO Profiles:Os05g0242000

Genome Context

<gbrowseImage1> name=NC_008398:8651787..8653305 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:8651787..8653305 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgtggcgtcgttggaatcttcggtggaggcaacgttggatgccctcagaggagatcaatggagggcgcggcagccatttaccatcttccgcgttcccgccaacgtccgcgagagcaatcgcacctcgtacgagccgcgcgtggtgtccatcggcccctattaccacggcggcgccgcactgcgcaccatggaggaccacaagtggcactacctacagggcctgctgtcccgccacgccggcgacggcagtgtcgcggcggtcagcgcgtccactttggtcgcagagatgagaaccctggaggcccaggcgcgcgcctgctacagcgagcgccccgccggcctcgcctccgacgacttcatcgtgatgctcctgctcgatggctgcttcatcctcgagttcctcttaaagtggcacgccaaggagcccgacgcgctctgcgacgctggaaggggcctcacgcttgtccccgcggccgccgacctgctcctcatggagaaccagatcccgttcttcgtcctcgagaggctctatggcgcagtcaccggcggcggcgcccagcacggcagggagtccctccttcaccttttcgtcaagtacctcggcagtgaggacgaagagccaatgagatggccttccggcgactgggaggtccaccacctcctccatctgtactaccagagcttcattcccaaccgaacaccgccgcgaagccgccgaggcccacggtctgaccgacggacgatcaccaggacgccacgggtgataccatgcgcaaccgagatgagagaggcgggggtacagttcgtcgccgcgcagagcccagcggccgccgcaggggggacgaggtacgacgtggcgttcgacgcccgctggggcgtaatggagatacccacagtcctgatcgacgacgcgaggcggccgctgctcgcgaacctgctcgcgttcgagcagagccagcgcggcgaggaggaggggctcctgagcagctacgtggcactgatgagccagctcatcgtgacagcacgcgacgtggagctgctccgccggcgcggcgtcgtggtgaacctgttggacaacgacgaggaggcggcccggttcttcaaccgcctcgacgactgccacccggcgggctacgactcgcaggccttctccggactgtacgacgacgtgacgcgctactgtgggacatggtggcacagccacatggctgggctccggcgcaattattttcccagcccgtggtcggccatctccgttgccgtcgccacattcgtcatcgctctagccgctacacagacatacttcacggtgttcccacccaacaagtga</cdnaseq>

Protein Sequence

<aaseq>MDVASLESSVEATLDALRGDQWRARQPFTIFRVPANVRESNRTS YEPRVVSIGPYYHGGAALRTMEDHKWHYLQGLLSRHAGDGSVAAVSASTLVAEMRTLE AQARACYSERPAGLASDDFIVMLLLDGCFILEFLLKWHAKEPDALCDAGRGLTLVPAA ADLLLMENQIPFFVLERLYGAVTGGGAQHGRESLLHLFVKYLGSEDEEPMRWPSGDWE VHHLLHLYYQSFIPNRTPPRSRRGPRSDRRTITRTPRVIPCATEMREAGVQFVAAQSP AAAAGGTRYDVAFDARWGVMEIPTVLIDDARRPLLANLLAFEQSQRGEEEGLLSSYVA LMSQLIVTARDVELLRRRGVVVNLLDNDEEAARFFNRLDDCHPAGYDSQAFSGLYDDV TRYCGTWWHSHMAGLRRNYFPSPWSAISVAVATFVIALAATQTYFTVFPPNK</aaseq>

Gene Sequence

<dnaseqindica>52..1386#gcatgcgtgtcttcttcctaccatcacttctctcgttttgctatcgatctcatggatgtggcgtcgttggaatcttcggtggaggcaacgttggatgccctcagaggagatcaatggagggcgcggcagccatttaccatcttccgcgttcccgccaacgtccgcgagagcaatcgcacctcgtacgagccgcgcgtggtgtccatcggcccctattaccacggcggcgccgcactgcgcaccatggaggaccacaagtggcactacctacagggcctgctgtcccgccacgccggcgacggcagtgtcgcggcggtcagcgcgtccactttggtcgcagagatgagaaccctggaggcccaggcgcgcgcctgctacagcgagcgccccgccggcctcgcctccgacgacttcatcgtgatgctcctgctcgatggctgcttcatcctcgagttcctcttaaagtggcacgccaaggagcccgacgcgctctgcgacgctggaaggggcctcacgcttgtccccgcggccgccgacctgctcctcatggagaaccagatcccgttcttcgtcctcgagaggctctatggcgcagtcaccggcggcggcgcccagcacggcagggagtccctccttcaccttttcgtcaagtacctcggcagtgaggacgaagagccaatgagatggccttccggcgactgggaggtccaccacctcctccatctgtactaccagagcttcattcccaaccgaacaccgccgcgaagccgccgaggcccacggtctgaccgacggacgatcaccaggacgccacgggtgataccatgcgcaaccgagatgagagaggcgggggtacagttcgtcgccgcgcagagcccagcggccgccgcaggggggacgaggtacgacgtggcgttcgacgcccgctggggcgtaatggagatacccacagtcctgatcgacgacgcgaggcggccgctgctcgcgaacctgctcgcgttcgagcagagccagcgcggcgaggaggaggggctcctgagcagctacgtggcactgatgagccagctcatcgtgacagcacgcgacgtggagctgctccgccggcgcggcgtcgtggtgaacctgttggacaacgacgaggaggcggcccggttcttcaaccgcctcgacgactgccacccggcgggctacgactcgcaggccttctccggactgtacgacgacgtgacgcgctactgtgggacatggtggcacagccacatggctgggctccggcgcaattattttcccagcccgtggtcggccatctccgttgccgtcgccacattcgtcatcgctctagccgctacacagacatacttcacggtgttcccacccaacaagtgatctctcgtggattagatatcaattttgctatatatttatcgacagatgtaattacagtacaattatagtgtgattacactgtaacttacatgtaattacactgtaactataatataacttgtatgtaactttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0242000, RefSeq:Os05g0242000