Os05g0214400

From RiceWiki
Revision as of 20:06, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0214400

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001061462.1 GI:115462654 GeneID:4338108

Length

1426 bp

Definition

Oryza sativa Japonica Group Os05g0214400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7069141..7070566

Sequence Coding Region

7069141..7069356,7069441..7069506,7069743..7069815,7069915..7070050,7070172..7070233
,7070412..7070566

Expression

GEO Profiles:Os05g0214400

Genome Context

<gbrowseImage1> name=NC_008398:7069141..7070566 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:7069141..7070566 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccccgaagcgccgccgtgcccgtccggcggacgagagctcgacgccgccgccgccgcctcctcccttgcggacggcgccttcgcatttgcagccggtggttgttttcgcccacggcgccggcgccccctcttcatccgactggatggtccattggaaggatatggtgaaggatgcgctcgatgctatcgaagttgtcacctttgattacccatatatgtcaggtgggaagcgcagggctccgccgaaggcggagaagcttgttgatcatcaccttggtgtggtgaaggacgctgtagcgaagcatccagggcacccacttgttctgatggggaagtctatgggttcaagggtcagctgtatggtggctgattcagatgatattattgtttctgctgtcatatgcttgggttatccgttaaagggagtgaacggggcagtgagggatgagacactactgaaactgaagattccaacaatgtttgtgcagggcaataaagatgggttatgccctttggataagcttgaggccactcgcaagaagatgaactgcaagaatgaactgcatgttattgatggtggtgaccactcctttaaaatcggcaaaaagtatcaagagtctactggagtgaatcaacaagctgcagaaatggaagctgttaaagctattgcaaaatttgtgcagaactccatagcaggaacctga</cdnaseq>

Protein Sequence

<aaseq>MAPKRRRARPADESSTPPPPPPPLRTAPSHLQPVVVFAHGAGAP SSSDWMVHWKDMVKDALDAIEVVTFDYPYMSGGKRRAPPKAEKLVDHHLGVVKDAVAK HPGHPLVLMGKSMGSRVSCMVADSDDIIVSAVICLGYPLKGVNGAVRDETLLKLKIPT MFVQGNKDGLCPLDKLEATRKKMNCKNELHVIDGGDHSFKIGKKYQESTGVNQQAAEM EAVKAIAKFVQNSIAGT</aaseq>

Gene Sequence

<dnaseqindica>1211..1426#1061..1126#752..824#517..652#334..395#1..155#atggccccgaagcgccgccgtgcccgtccggcggacgagagctcgacgccgccgccgccgcctcctcccttgcggacggcgccttcgcatttgcagccggtggttgttttcgcccacggcgccggcgccccctcttcatccgactggatggtccagtgagctctcactctctttatctctctgtcctgtcttctctcccccctttgcgtgtgcgcgtatggataatcggaattgtggcgactattttgttggtagaggtagcgtcttttttttttttttggtatgtgcgtgatgatgtgcgaaattgagggagtgatttctcatctctgttagttggaaggatatggtgaaggatgcgctcgatgctatcgaagttgtcacctttgattacccatgtgagtttgtctgatgagctctaagtgctgatttgttgacccctcactgttcgctaaactcgttgatgaaaatctgttggggggagaatttcatggtagagcaacaatttgttggctgcagatatgtcaggtgggaagcgcagggctccgccgaaggcggagaagcttgttgatcatcaccttggtgtggtgaaggacgctgtagcgaagcatccagggcacccacttgttctgatggggaagtctatgggttcaaggtgatatgtgggagctttaatctcgtttattactttatttcagacttgtttgtgtttttgacatctgtctcaagattgtagtcctcatacatttttcagggtcagctgtatggtggctgattcagatgatattattgtttctgctgtcatatgcttgggttatccgttaaaggtatcctctgtgttgtgtggggtaatatgattgctacaatgtatgaggatgtaacccacatcaaaaaatgatttagccttcggtttccattatataataatttgtaggacctgaaccagtttttcaggaaaagggttgctgtgattttaaaacatgctccacttggttattttcactctctgttatggctctacttagggatgttttgttttgcatccttgctttcttcctcttagggagtgaacggggcagtgagggatgagacactactgaaactgaagattccaacaatgtttgtgcaggtatttctttctgaacacactttgaaatgaaaaataatattcaatattttttaagcttggtatgcaatgcatttttgttcacagggcaataaagatgggttatgccctttggataagcttgaggccactcgcaagaagatgaactgcaagaatgaactgcatgttattgatggtggtgaccactcctttaaaatcggcaaaaagtatcaagagtctactggagtgaatcaacaagctgcagaaatggaagctgttaaagctattgcaaaatttgtgcagaactccatagcaggaacctga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0214400, RefSeq:Os05g0214400