Os05g0224700
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0224700 |
|---|---|
| Description |
RNA polymerase Rpb7, N-terminal domain containing protein |
| Version |
NM_001061491.1 GI:115462712 GeneID:4338139 |
| Length |
3709 bp |
| Definition |
Oryza sativa Japonica Group Os05g0224700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:7641237..7644945 |
| Sequence Coding Region |
7641237..7641680,7641832..7641885,7643028..7644216,7644284..7644945 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:7641237..7644945 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:7641237..7644945 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggttttccttaaggtggatatgtcttggaatgtgttgatctcacctagcgagctgagccccaagggtctcttgctccgcaaggctgtcattgttagtcttctggaggagatagcaaacaggaaggcctccaaggatcatggttactacattgctgtcagtgagctgaaggcgatatcagaagggaaagtgcgcgagctgaccggagatgttcttttcccagtgacattcacctgcatcacacagaagcctacgaagggcgagatcttagttggctctgtggataagatcctcaagcatggcgtgttcctcaaatctggaccaatagaaagcatcttcctgtcagagaagacactgagcgactacaagtacatcggtggggagaaccctatgttcatgaatgaccactcgaagctggagaaggacaccgctgtgcgcttcaagtttgatgtcatgatgatgatgattagaccagtagctgtgatgctggctgttgatctaacactcgaaggtgaagcttcaattgacaggaatcgcttagggctaacaagtcgccttaacataggaggttttggccatgccttctacaagtatcctctaaactttagaaagaactcaaatagtcccaatgacccctcctttgctacaacattcgtgttcactattactacttggagagatcagcctcaagaagcaggaagtgatggtattgcctttgtgctttcttccaccaacaagttgataaaccactccttgggaggtcagtacctaggccttttcaatgcgtcgaatacttcacaaaatatattagctatcgagcttgataccttcatgaatcctgatttgaacgacatggatgataaccatgttggaatagatgtcaacagcttgatttcaatcaactcccataccgctgggttctacacctctgatggtggattccaactccttaggcttgccaatggtagatctccaatattgcagctatgggtggactatgatggcaaagctcaccaactaaatgtcaccttaggtcttccctattcccctaaacctgaatatccgctactttcgagcatcgtcaatctctcatccttgttaccaagttcttcgtacattgggttttccgcgtcggtaaattcaccgaaaactagacattttattctaggttggagcttcaaggaaaatgggagagtcccaccccttccttcagtcccagtcacagacccagaaacatatggatggggaggcaacttctttgcgccaccaccacctccacagcttaacacacaccaagttcacaaacactccttgcaaattctcctaccaatagttatgacttcagttatcttgcttcttcttgttgctttccttggttggcggaaaaaagctgggccacaagaagactgggaaatgaagtgcaggccaccatctttcatatacaaagatttatataatgcaacttctgggttcagtgacaaaatgctccttgggaagggagggtttgggaaagtttacagaggatttcttcctgcctctaagcggaatgtcgcgatcaagcgcatctccccagagtcgaagcaagggatgaaggagtttatgtctgaagttgcaatactaggcaatgttcgtcaccggagtctttcagttacttggctatcgcaggaacaagcacgagctcctcttggttggtctcaaagatttcgcaccatcaaaggtgtcgcgtgtggactcgcttacctccatgaggaatgggagcgtgtgatcatccatcgagatatcaagtcaagcaacgtattgcttgacgaggaaatgaatggaaggttgggtgattttggccttgcaagattacatgatcacagagttgatgcctacaccacacatgtagcaggcacatatggttacattgctccagagctagctaggcttggaaaatcaaccaagggtaccgatgttttcgcatttggggtgttcatgatggaggctgcacgtggaaataggccaattgaggtgaattcctgtggagaacctcaagcgctagcagatcatgtgctcaatgcgtggcaacgcagttcaatcataaactccatagatccaagtctggaagatcacgttgcagaggaggtagtattagttttaaagcttgggcttctatgttcacattcatcgcccaaggtgaggcctagcatgcgcttagtgatgcaatacctggaaagggaagcaacgctccaggacttcgcatttagtttcttcagcatcaatgaagctaataatgaagtttatggtcagcatgttgtatcaaatccctctgtagcaaccaccataaccactctttctggaggaagatga</cdnaseq> |
| Protein Sequence |
<aaseq>MVFLKVDMSWNVLISPSELSPKGLLLRKAVIVSLLEEIANRKAS KDHGYYIAVSELKAISEGKVRELTGDVLFPVTFTCITQKPTKGEILVGSVDKILKHGV FLKSGPIESIFLSEKTLSDYKYIGGENPMFMNDHSKLEKDTAVRFKFDVMMMMIRPVA VMLAVDLTLEGEASIDRNRLGLTSRLNIGGFGHAFYKYPLNFRKNSNSPNDPSFATTF VFTITTWRDQPQEAGSDGIAFVLSSTNKLINHSLGGQYLGLFNASNTSQNILAIELDT FMNPDLNDMDDNHVGIDVNSLISINSHTAGFYTSDGGFQLLRLANGRSPILQLWVDYD GKAHQLNVTLGLPYSPKPEYPLLSSIVNLSSLLPSSSYIGFSASVNSPKTRHFILGWS FKENGRVPPLPSVPVTDPETYGWGGNFFAPPPPPQLNTHQVHKHSLQILLPIVMTSVI LLLLVAFLGWRKKAGPQEDWEMKCRPPSFIYKDLYNATSGFSDKMLLGKGGFGKVYRG FLPASKRNVAIKRISPESKQGMKEFMSEVAILGNVRHRSLSVTWLSQEQARAPLGWSQ RFRTIKGVACGLAYLHEEWERVIIHRDIKSSNVLLDEEMNGRLGDFGLARLHDHRVDA YTTHVAGTYGYIAPELARLGKSTKGTDVFAFGVFMMEAARGNRPIEVNSCGEPQALAD HVLNAWQRSSIINSIDPSLEDHVAEEVVLVLKLGLLCSHSSPKVRPSMRLVMQYLERE ATLQDFAFSFFSINEANNEVYGQHVVSNPSVATTITTLSGGR</aaseq> |
| Gene Sequence |
<dnaseqindica>1..444#596..649#1792..2980#3048..3709#atggttttccttaaggtggatatgtcttggaatgtgttgatctcacctagcgagctgagccccaagggtctcttgctccgcaaggctgtcattgttagtcttctggaggagatagcaaacaggaaggcctccaaggatcatggttactacattgctgtcagtgagctgaaggcgatatcagaagggaaagtgcgcgagctgaccggagatgttcttttcccagtgacattcacctgcatcacacagaagcctacgaagggcgagatcttagttggctctgtggataagatcctcaagcatggcgtgttcctcaaatctggaccaatagaaagcatcttcctgtcagagaagacactgagcgactacaagtacatcggtggggagaaccctatgttcatgaatgaccactcgaagctggagaaggacaccgctgtgcgcttcaaggtgatgggtttccgctggatggaagctgatcgccagttccagatccttgctaccctggctggtgactatcttgggccactatgaactgcttccacaggttagtggtgatgaatggatctgaaatgtattatctttaacctgctgtctgtagtttgatgtcatgatgatgatgattagaccagtagctgtgatgctggctgttgatgtaagtgacatttggccctatgtttagcatttcagcatgatgcgaattgtcatggccgtttaacctctgtttcctatcgctgctcacagttctcctatgcatatatttgctgcattcctttctgagatatttgcctttgcaacgtcgaatttgcaatatttctctatgcaattgtttccttgtgttacaatcagcttaatatgcaagtaacatcaaaataccccagatgttaccctgacaagcaaatcatttttgccacaaattagtctatgacagctagtagtagttggcacttggcaaatcgtgttgtctgcttcagtttgctctttgctacacactttttgccgagagaagtagaaagcttttaaattttacaaagaaatttctttttttcctatgttaattcaaattgagtcaatcatatggtgattcgtgaacgaccatctagcttcaggagaaattaacgatctgcaaccgggtttcagaggaagtttctctgcaaaatgcatctctgatttacagtggagctcgagaaatgaaatagatttaagtctgaattccaattaatctatccatagttggacgcagggctagtcactgattttggcaagtggcaactgattaatccggcccctaaatggcacagtgaattgatgttttttataccgaagggcaacaatttgtttagatgtacaataaaattatttacgacttgttaataatgtgaggcaataataaagcattcactgtccgtagccaacaatataggagatggacttcaattgtgcaatataattttgaagaataaatgaaagaaaaaactgtttttcttttctgaaagttgaccaaaagtcatcattccaagtcgttgccgtgtcgtgtctgatacatcatttttgttttctctatctatcataatcatcatcaatccatgtgtatctttagcatgactgaacaaagttcgccattaacaacctgacttgcctagagccatagcagcctgtgcatgttcatcccatacggtaacaccattagctatgttttcttgtgctttgtactactgcttttatgcctttatcatcctcctttctacctcccatgccgaagaattcatctacaatggattcactgatgctgatcagctaacactcgaaggtgaagcttcaattgacaggaatcgcttagggctaacaagtcgccttaacataggaggttttggccatgccttctacaagtatcctctaaactttagaaagaactcaaatagtcccaatgacccctcctttgctacaacattcgtgttcactattactacttggagagatcagcctcaagaagcaggaagtgatggtattgcctttgtgctttcttccaccaacaagttgataaaccactccttgggaggtcagtacctaggccttttcaatgcgtcgaatacttcacaaaatatattagctatcgagcttgataccttcatgaatcctgatttgaacgacatggatgataaccatgttggaatagatgtcaacagcttgatttcaatcaactcccataccgctgggttctacacctctgatggtggattccaactccttaggcttgccaatggtagatctccaatattgcagctatgggtggactatgatggcaaagctcaccaactaaatgtcaccttaggtcttccctattcccctaaacctgaatatccgctactttcgagcatcgtcaatctctcatccttgttaccaagttcttcgtacattgggttttccgcgtcggtaaattcaccgaaaactagacattttattctaggttggagcttcaaggaaaatgggagagtcccaccccttccttcagtcccagtcacagacccagaaacatatggatggggaggcaacttctttgcgccaccaccacctccacagcttaacacacaccaagttcacaaacactccttgcaaattctcctaccaatagttatgacttcagttatcttgcttcttcttgttgctttccttggttggcggaaaaaagctgggccacaagaagactgggaaatgaagtgcaggccaccatctttcatatacaaagatttatataatgcaacttctgggttcagtgacaaaatgctccttgggaagggagggtttgggaaagtttacagaggatttcttcctgcctctaagcggaatgtcgcgatcaagcgcatctccccagagtcgaagcaagggatgaaggagtttatgtctgaagttgcaatactaggcaatgttcgtcaccggagtctttcagttacttggctatcgcaggaacaagcacgagctcctcttggtttatgattatatgcccaatggcagccttgataaatatttgtatggtcgacacaaattggctttaggttggtctcaaagatttcgcaccatcaaaggtgtcgcgtgtggactcgcttacctccatgaggaatgggagcgtgtgatcatccatcgagatatcaagtcaagcaacgtattgcttgacgaggaaatgaatggaaggttgggtgattttggccttgcaagattacatgatcacagagttgatgcctacaccacacatgtagcaggcacatatggttacattgctccagagctagctaggcttggaaaatcaaccaagggtaccgatgttttcgcatttggggtgttcatgatggaggctgcacgtggaaataggccaattgaggtgaattcctgtggagaacctcaagcgctagcagatcatgtgctcaatgcgtggcaacgcagttcaatcataaactccatagatccaagtctggaagatcacgttgcagaggaggtagtattagttttaaagcttgggcttctatgttcacattcatcgcccaaggtgaggcctagcatgcgcttagtgatgcaatacctggaaagggaagcaacgctccaggacttcgcatttagtttcttcagcatcaatgaagctaataatgaagtttatggtcagcatgttgtatcaaatccctctgtagcaaccaccataaccactctttctggaggaagatga</dnaseqindica> |
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