Os05g0233900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0233900 |
|---|---|
| Description |
Zinc finger, TTF-type domain containing protein |
| Version |
NM_001187356.1 GI:297723842 GeneID:9270653 |
| Length |
4762 bp |
| Definition |
Oryza sativa Japonica Group Os05g0233900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:8153376..8158137 |
| Sequence Coding Region |
8153376..8153849,8155737..8156530,8156727..8156921,8157006..8158137 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:8153376..8158137 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:8153376..8158137 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcaagtagtgatatatcaaggtcaacccgagaatgagagtgatagtggggcaaccagtccaaccacagtaccgcctgatgtagagaatgatgatattggaggagggccaaatgatgactcatcaagtgatgaagacaatgatggtggtgtatatgacatagagcatgatcctggattgaggactcctatctcacaatatgatgtcaatgaccaagattcagttagaagggagtatattgcattgggcccttgtcaaccaaagatgaagaagggggattttccacagcatgagtgtggaggtatgcaccgcttcctgccaaaatggttttctgagttcaagtggcttgagtatagtgtgcatagagatgctgcatattgctttgtttgttacttgttcaaagatagcactaacaatcatggtggagatgcttttgttaatggaggttttagaaattggaacattaaaagtagatttagtaaacatgctggtgctgtcaatagtgctcattgtgaagctgaagagaaatacaatttgttcatgcaacctaagacatcaattcgtgagtcctttgcatcaaactctgcagagtttaaggttcaatacttagctcgcttgacatggtcacttaagtgcataagatatcttctgcggcaggggttggcttttcgtggtcatgatgagtcaaaggattctaacaacaaaggaaattttagggaacttgtgcaatggctagctgggaactttgaagaagttaataaggtggttctaggaaatgctccaactggttgtcaaatgatagaccataagattcagaaacaactcattggttcttgtgctcacgaaacaactaaacttgtcatagaggaacttcatgatgagtgttttgcaattcttgctgatgagtctagtgatgcctaccaaaaagaacaattggctctttgcttgcggtttgtcaatacgacggggcaaccagttgaacggtttcttggtcttgtccatgttgaagatactacatcattgactcttaaggaggcaattaagtctttgcttattaagtaccaactacccttatccaaggtacgtggacaaggatatgatggtgctagtaacatgaaggatcatattaatgctgttgctaaggagaatactgattgtgcatggttctttgggcaacttgcatatttgttgaatgtccttgggatgtcttgtaaaaagatccgcatgcttcgtatagctcaagctgagtatatgattgaagcattgaagttgggtgaaattgagagtggccaaggtctgaatcaagagatgggcttagcaaggccagaggctataggagctcaaactatgctacaagtatttcagtcatttgagtttgttttcttgttgcacatgatgaatgaaatatttggatacacaagtgacttctgcaatgctctgcaaaggagggagcaagatattgtgaatgcaatggatattcttgagttcacaaaggcagaatttgatgttttgagagaagattgtggatggaaagaatttcttggaaaggtcacttctttttgtgtgaagcacaaagttaaagttgttgacatggatgggaagtataagcctatacaaagatcaaggaaattcttcagagatgctattaattaccatcgattccatgccgatatgtttttgggtgtcattgataggcaacttcaagagctcaataacagatttgatgaggtaaacacagaattacttagatgcatggcatcatttagcccagccaaatccttctctgcttttaatgttgacaacttagttaagcttgccaagttctatcctagtgattttgatgttgaagaaatgaaccaactcccctttcaactgaaccgctatattagtgatgtgggtaaggatgagaatttcacaaatttgagaagtttagcagacctatctatgatgcttgtcaaaacaaacaaggtttctcgctatgaccttgtttacagacttctcaaattggtgttagttctccctgttgcaactgctggtgttgagagggttttctcttcaatgaactatatcaaaaacaagttaagaagcaagatgggacaagaatatttgaatgattgcttggacgagaagacctcgcccaactgtccgtcctccgcgccaccacgcaacggcatcgtgtacctagtgcttgaaggacgtagaaacgtcgcggacctaccgctttgcccaatcgcgccactcgagtgtcaaccgcctgtagaagccgcatcgccaggtgatggagtcgccgcgttgattgctttccttcttcctgaaattgcgctgctgcccaaggaaaccgagctgtctcccggaaaatgcgtcgcctccaacaaatcggatacgcgccctctatctgccaccgtatctagagcttcggctgcaccgaaaaccacgccgcttgttgcgccgcaatcaccgccgcagctccgatcacgcgcgagctatcggcctcaccttcgcggctcaagcccagcgagaggccacgacgcgcatctcgcctgcgcctcgtgcacggcgcctgatgctcgtcggtgtgcttctgctcttcggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MQVVIYQGQPENESDSGATSPTTVPPDVENDDIGGGPNDDSSSD EDNDGGVYDIEHDPGLRTPISQYDVNDQDSVRREYIALGPCQPKMKKGDFPQHECGGM HRFLPKWFSEFKWLEYSVHRDAAYCFVCYLFKDSTNNHGGDAFVNGGFRNWNIKSRFS KHAGAVNSAHCEAEEKYNLFMQPKTSIRESFASNSAEFKVQYLARLTWSLKCIRYLLR QGLAFRGHDESKDSNNKGNFRELVQWLAGNFEEVNKVVLGNAPTGCQMIDHKIQKQLI GSCAHETTKLVIEELHDECFAILADESSDAYQKEQLALCLRFVNTTGQPVERFLGLVH VEDTTSLTLKEAIKSLLIKYQLPLSKVRGQGYDGASNMKDHINAVAKENTDCAWFFGQ LAYLLNVLGMSCKKIRMLRIAQAEYMIEALKLGEIESGQGLNQEMGLARPEAIGAQTM LQVFQSFEFVFLLHMMNEIFGYTSDFCNALQRREQDIVNAMDILEFTKAEFDVLREDC GWKEFLGKVTSFCVKHKVKVVDMDGKYKPIQRSRKFFRDAINYHRFHADMFLGVIDRQ LQELNNRFDEVNTELLRCMASFSPAKSFSAFNVDNLVKLAKFYPSDFDVEEMNQLPFQ LNRYISDVGKDENFTNLRSLADLSMMLVKTNKVSRYDLVYRLLKLVLVLPVATAGVER VFSSMNYIKNKLRSKMGQEYLNDCLDEKTSPNCPSSAPPRNGIVYLVLEGRRNVADLP LCPIAPLECQPPVEAASPGDGVAALIAFLLPEIALLPKETELSPGKCVASNKSDTRPL SATVSRASAAPKTTPLVAPQSPPQLRSRASYRPHLRGSSPARGHDAHLACASCTAPDA RRCASALR</aaseq> |
| Gene Sequence |
<dnaseqindica>4289..4762#1608..2401#1217..1411#1..1132#atgcaagtagtgatatatcaaggtcaacccgagaatgagagtgatagtggggcaaccagtccaaccacagtaccgcctgatgtagagaatgatgatattggaggagggccaaatgatgactcatcaagtgatgaagacaatgatggtggtgtatatgacatagagcatgatcctggattgaggactcctatctcacaatatgatgtcaatgaccaagattcagttagaagggagtatattgcattgggcccttgtcaaccaaagatgaagaagggggattttccacagcatgagtgtggaggtatgcaccgcttcctgccaaaatggttttctgagttcaagtggcttgagtatagtgtgcatagagatgctgcatattgctttgtttgttacttgttcaaagatagcactaacaatcatggtggagatgcttttgttaatggaggttttagaaattggaacattaaaagtagatttagtaaacatgctggtgctgtcaatagtgctcattgtgaagctgaagagaaatacaatttgttcatgcaacctaagacatcaattcgtgagtcctttgcatcaaactctgcagagtttaaggttcaatacttagctcgcttgacatggtcacttaagtgcataagatatcttctgcggcaggggttggcttttcgtggtcatgatgagtcaaaggattctaacaacaaaggaaattttagggaacttgtgcaatggctagctgggaactttgaagaagttaataaggtggttctaggaaatgctccaactggttgtcaaatgatagaccataagattcagaaacaactcattggttcttgtgctcacgaaacaactaaacttgtcatagaggaacttcatgatgagtgttttgcaattcttgctgatgagtctagtgatgcctaccaaaaagaacaattggctctttgcttgcggtttgtcaatacgacggggcaaccagttgaacggtttcttggtcttgtccatgttgaagatactacatcattgactcttaaggaggcaattaagtctttgcttattaagtaccaactacccttatccaaggtacgtggacaaggatatgatggtgctagtaacatgaaggatcatattaatggtttgaataaactaattatggatgaatccccctcagcttactatgtacattgttttgcccattaacttcaactaacccttgtagctgttgctaaggagaatactgattgtgcatggttctttgggcaacttgcatatttgttgaatgtccttgggatgtcttgtaaaaagatccgcatgcttcgtatagctcaagctgagtatatgattgaagcattgaagttgggtgaaattgagagtggccaaggtctgaatcaagagatgggcttagcaaggccaggtgagaaccttgttacctccaatcctctatcatatctctactacatctctaaattgtactcactactttaattaacatatggtggcaagtgatacacgttggggatctcactacaagatagtaatgcatgtcatgcttctatatccttcaatcaagaaagttctattcaaggttgggaaagagtgtaatggggcagaggctataggagctcaaactatgctacaagtatttcagtcatttgagtttgttttcttgttgcacatgatgaatgaaatatttggatacacaagtgacttctgcaatgctctgcaaaggagggagcaagatattgtgaatgcaatggatattcttgagttcacaaaggcagaatttgatgttttgagagaagattgtggatggaaagaatttcttggaaaggtcacttctttttgtgtgaagcacaaagttaaagttgttgacatggatgggaagtataagcctatacaaagatcaaggaaattcttcagagatgctattaattaccatcgattccatgccgatatgtttttgggtgtcattgataggcaacttcaagagctcaataacagatttgatgaggtaaacacagaattacttagatgcatggcatcatttagcccagccaaatccttctctgcttttaatgttgacaacttagttaagcttgccaagttctatcctagtgattttgatgttgaagaaatgaaccaactcccctttcaactgaaccgctatattagtgatgtgggtaaggatgagaatttcacaaatttgagaagtttagcagacctatctatgatgcttgtcaaaacaaacaaggtttctcgctatgaccttgtttacagacttctcaaattggtgttagttctccctgttgcaactgctggtgttgagagggttttctcttcaatgaactatatcaaaaacaagttaagaagcaagatgggacaagaatatttgaatgattgcttggttacattcattgaaagggatttgttcttgcaagtcaaggataaagacatcatcaatcattttcaaaatatcaagaaacgaaaagttcttctctaaactgtaagatttcttatcattttgccattttgtatgctctaatatgcttaacacattcaatttatgatcaattttatccatccatctatgactatttgaaatcatgtttataccgttatgtaatatacaactattagacttgggttgaaaatttttttctatctcttctaatttcgaatacccaagttgaaaatcctgggcccacccctggttgctacctttcctagattattgatcaaattccttttggtgggttccaaaacaacctagaaggctggagtttgatttttcaaatatgcatctgaataaagagaattcgtataattaatcattgtaaatacagaaaaaaattacagcaaagttaattttttgaataaaaacgtgccatagaatggttcttccgagggtgctagctagctaggcaatgacgaacgcctgaagtgtcaaacctggaaagtggaaactagtcaaactacaattagttgaactttactatgacatgaaaaatcacttgcataatgaaatattacttacatttagatcagaagacaattaattttcatctttttaatattgcaaaatattaaatatattcatttcaatcaactttcagcataggtgcaatctgtaaaacagtgtgcaaatgcagcaaataatttagaacgactgagaacagaaaggcatatgggtacataactatatagattcaaatatgaacacaaacgtagacatattcatattcagctggataattgccataaaatattccatttgattatttccatcggtttactctgtacaatagtaaatattttcattataaaatcctcagctccggggagacatttctacaggcttaaagagccgctagcttatgaaaacatttccacaagtggcgtttatgccgtctgctctatgaaaatgctaacgatagttttctctaataaaagaaaatttggttttacttcctatggataaacaccgccgggaagatagccgggcagcgtcggctcctgagaagggatgtacatttaggctagatagaagaacattgttgggagggagagattagactaattgatattcattgcttaattaatcatagacacaatcacatccttatatagatggtgccaacttgatccctaactaagaacttaatcttatcttatctaactaataattttatctctaacttgattggtttgggctgcctataagtcttgacctacagcccaatacccatgacattacacccctccttttgagcagctcgtcctcgagctgcaacatagacttctaaacttaaatgacttcctagataaaacttaacataactcaagctgtttacatctcgacttgttacattactatgacaggaaaataaaatttgatagaagataatttgccatgccaatttgctgtctgaaaccactggcgggccccatccaaaagctttgagtgaaaggccgagtctatgccatggcaaaggcccaagctgactgctcatggcccaatgcatgatggcaagcagcatgtatctctttctcaagctataacttagggtgtgtttgagcagaaggggattgagaagattgggaagatacgcaaaacaaggtgagccattagcatatgattaattaagtattaactattttaaactttaaaaatggattatttttttttaaaaaacataccgtttagtagttcggtaagcgtgcgcgtgggaacgaaacaatctttatctctttctcgtgcgctcgaacgcaatcaatctgttcagccatgcaggacgagaagacctcgcccaactgtccgtcctccgcgccaccacgcaacggcatcgtgtacctagtgcttgaaggacgtagaaacgtcgcggacctaccgctttgcccaatcgcgccactcgagtgtcaaccgcctgtagaagccgcatcgccaggtgatggagtcgccgcgttgattgctttccttcttcctgaaattgcgctgctgcccaaggaaaccgagctgtctcccggaaaatgcgtcgcctccaacaaatcggatacgcgccctctatctgccaccgtatctagagcttcggctgcaccgaaaaccacgccgcttgttgcgccgcaatcaccgccgcagctccgatcacgcgcgagctatcggcctcaccttcgcggctcaagcccagcgagaggccacgacgcgcatctcgcctgcgcctcgtgcacggcgcctgatgctcgtcggtgtgcttctgctcttcggtga</dnaseqindica> |
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