Os05g0247100

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Revision as of 10:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0247100| Description = Similar to Chitinase (EC 3.2.1.14) III C00481-rice (EC 3.2.1.14)| Version = NM_001061552.2 GI:297604124 GeneID:433820...")
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Gene Name

Os05g0247100

Description

Similar to Chitinase (EC 3.2.1.14) III C00481-rice (EC 3.2.1.14)

Version

NM_001061552.2 GI:297604124 GeneID:4338208

Length

1199 bp

Definition

Oryza sativa Japonica Group Os05g0247100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8913650..8914848

Sequence Coding Region

8913886..8914779

Expression

GEO Profiles:Os05g0247100

Genome Context

<gbrowseImage1> name=NC_008398:8913650..8914848 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:8913650..8914848 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcccgacgccttgccccgctgctggtcctactgctctcgtccagcctcgccgccggccagagcaccggcgacaccgtcgtgttctggggccggaacacggaccagctcgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctccttcctcagcgccttcggctacatcccgggcacctacaagctggacatctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggcatcctcgtcctcctcgccatcggcggccagggcggcgagtactccctgccgacctcccaggcggccgtcgacctcgaggactacctctggaacgccttcctcggcggcggccgccccggcgtcgcccgccccttcggcgacgccgtcgtcgacggcatcgacttcttcatcgaccagggcgccacggagcactacgacgagctggcgcggcggctgtacgcgcacaacaaggactacaaggggaggctcggggtgatgctgacggcgacggcgaggtgcgtgttcccggaccagcggctgcaggcggcgctgtccacggggctcttctcgcggatccacgtcaaggtgttcggcgacgggcggtgcgcgtcgaggagggaggagctggagaagtggatggcggcgtacccgcagagccgcgtcctcgtcggcgtcgtcgcgtcgccggaggctgacagggacggctacgtgtcgcacaaggatctctactacgacgtgctgcagttcatcaacaagctgcccaactatgggggcatcatggtctggaacaggtactgggacaagaagaccggatggacggctggtaatgagcctggtctcctggatcaggttctgtga</cdnaseq>

Protein Sequence

<aaseq>MASRRLAPLLVLLLSSSLAAGQSTGDTVVFWGRNTDQLEGSLRE ACDTGLYTTVIISFLSAFGYIPGTYKLDISGHTVSAVGPDIKHCQSRGILVLLAIGGQ GGEYSLPTSQAAVDLEDYLWNAFLGGGRPGVARPFGDAVVDGIDFFIDQGATEHYDEL ARRLYAHNKDYKGRLGVMLTATARCVFPDQRLQAALSTGLFSRIHVKVFGDGRCASRR EELEKWMAAYPQSRVLVGVVASPEADRDGYVSHKDLYYDVLQFINKLPNYGGIMVWNR YWDKKTGWTAGNEPGLLDQVL</aaseq>

Gene Sequence

<dnaseqindica>70..963#gcatcacaatcgataggtagctaactactccatctagctaagacccgtagtgtatagtagtcaagatcaatggcgtcccgacgccttgccccgctgctggtcctactgctctcgtccagcctcgccgccggccagagcaccggcgacaccgtcgtgttctggggccggaacacggaccagctcgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctccttcctcagcgccttcggctacatcccgggcacctacaagctggacatctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggcatcctcgtcctcctcgccatcggcggccagggcggcgagtactccctgccgacctcccaggcggccgtcgacctcgaggactacctctggaacgccttcctcggcggcggccgccccggcgtcgcccgccccttcggcgacgccgtcgtcgacggcatcgacttcttcatcgaccagggcgccacggagcactacgacgagctggcgcggcggctgtacgcgcacaacaaggactacaaggggaggctcggggtgatgctgacggcgacggcgaggtgcgtgttcccggaccagcggctgcaggcggcgctgtccacggggctcttctcgcggatccacgtcaaggtgttcggcgacgggcggtgcgcgtcgaggagggaggagctggagaagtggatggcggcgtacccgcagagccgcgtcctcgtcggcgtcgtcgcgtcgccggaggctgacagggacggctacgtgtcgcacaaggatctctactacgacgtgctgcagttcatcaacaagctgcccaactatgggggcatcatggtctggaacaggtactgggacaagaagaccggatggacggctggtaatgagcctggtctcctggatcaggttctgtgatggacggctggtaattaaccagaccttgatccattttcactttgatcactgatcacttcactggattcatgcacgagctactactagtacgtgcacaaataaagtaagtaatgtcatgtgacgtgcatgcacaaataaagatggaaatgatatgataaaagattggggtatgtgtgtgtgtgtgtgttggataatgtaatgtaatgcacaaataaagtgaggtgatcaggacgggc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0247100, RefSeq:Os05g0247100