Os05g0273800

From RiceWiki
Revision as of 20:07, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0273800

Description

Similar to Soluble epoxide hydrolase

Version

NM_001061604.1 GI:115462938 GeneID:4338270

Length

1756 bp

Definition

Oryza sativa Japonica Group Os05g0273800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11125610..11127365

Sequence Coding Region

11125757..11126015,11126484..11126719,11126793..11127293

Expression

GEO Profiles:Os05g0273800

Genome Context

<gbrowseImage1> name=NC_008398:11125610..11127365 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:11125610..11127365 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgccgataacgaggtggccgtcatcacccaccgcaccgtcgacgccaacggcctgcggatgcacgtcgcggaggccggcccgcccggcgcgcccccggtgctgctcctccacgggttcccgcaggtgtggtacgcctggcgccaccagatgcgcgcgctcgccgacgcagggtaccgcgccgtggcgcccgacctgcgcgggtacggcgactccgacgcgcccgccgccgagctgcagtacacggcgatgcacgtcgtgggcgacctggtggcgctcctcgacgccgtggtcggcgcggggaagccggtgttcgtggtggcgcacgactggggcgcgctcacggcgtggaacctgtgcctgttccgccccgacagggtgagggcgctcgtctccctcagtgtcgcgttcaccccacggagccccgcgaggaggcccgtcgacggcctgagggcgctctacggcgacgactactacatctgccggatccaggagcctggagcgatcgaagctgagttcgcacggctcggcacggagctggtgctgaggaagttcttggcttaccggactcctggcccgctgatgatgccaaagagcgggtgggggtcgccggacgacgaggtgccattgccgagctggataacagaggaggacatcaagtactacgcgagcaagttcgacaagactaatttcaccggaggattgaactactaccgcgccctcaacaagacatgggagctaacagcaccctggactggagctgagataaaggtgccagtgaagttcattgttggagacttggatttgacatatcatactccaggcattcaggattttattcacaaaggtggcttcaaaaagtatgtaccgctgctggatgatgtcgtggtcatgaagggtgtcggccacttcatcagtgaagaaaagccaaaggaagttagtgagcatgtaatcagcttcataagaaagttatcggctgaaatgtga</cdnaseq>

Protein Sequence

<aaseq>MAAAADNEVAVITHRTVDANGLRMHVAEAGPPGAPPVLLLHGFP QVWYAWRHQMRALADAGYRAVAPDLRGYGDSDAPAAELQYTAMHVVGDLVALLDAVVG AGKPVFVVAHDWGALTAWNLCLFRPDRVRALVSLSVAFTPRSPARRPVDGLRALYGDD YYICRIQEPGAIEAEFARLGTELVLRKFLAYRTPGPLMMPKSGWGSPDDEVPLPSWIT EEDIKYYASKFDKTNFTGGLNYYRALNKTWELTAPWTGAEIKVPVKFIVGDLDLTYHT PGIQDFIHKGGFKKYVPLLDDVVVMKGVGHFISEEKPKEVSEHVISFIRKLSAEM</aaseq>

Gene Sequence

<dnaseqindica>1351..1609#647..882#73..573#acctgctgcctcggcgcgccgtcgtcccctcctcatccccccgccgactccgacgccaagaaagacgacgcgatggccgccgccgccgataacgaggtggccgtcatcacccaccgcaccgtcgacgccaacggcctgcggatgcacgtcgcggaggccggcccgcccggcgcgcccccggtgctgctcctccacgggttcccgcaggtgtggtacgcctggcgccaccagatgcgcgcgctcgccgacgcagggtaccgcgccgtggcgcccgacctgcgcgggtacggcgactccgacgcgcccgccgccgagctgcagtacacggcgatgcacgtcgtgggcgacctggtggcgctcctcgacgccgtggtcggcgcggggaagccggtgttcgtggtggcgcacgactggggcgcgctcacggcgtggaacctgtgcctgttccgccccgacagggtgagggcgctcgtctccctcagtgtcgcgttcaccccacggagccccgcgaggaggcccgtcgacggcctgagggcgctctacggcgacgactactacatctgccggatccaggtacacaatacaacaaacaccttgcgatctttccataaatcgcagatagcttgaccgatcgattgatttgcaggagcctggagcgatcgaagctgagttcgcacggctcggcacggagctggtgctgaggaagttcttggcttaccggactcctggcccgctgatgatgccaaagagcgggtgggggtcgccggacgacgaggtgccattgccgagctggataacagaggaggacatcaagtactacgcgagcaagttcgacaagactaatttcaccggaggattgaactactaccgcgccctcaacaagtaagccatatcccctactacttgttggaaatatattatcaggctttgttcaaaagatgttcgatttggctgtgtcgtagggcagaggctagggatataaacgctttgatttggagtcaatttttccccaagtaaaattttagtcccaaaccttggcattttgacactatcaaatttgatagtatgaaattataactagtataggtaaaaattggtagcaaaacaaacattcatttcacaatacttgatgttgctaaaattttggtagaatgaaaattggcttcaatccaaacgagccccgttttcattattagaaaaaaaaactacgccaattaattatttaagtgtttgatttatataatttaattctttgatacattgcaaatataattaattgtataatcgttgcatgctagcattgcaacagaagggagtggagtaacatattttattttctgtttttttaaggacatgggagctaacagcaccctggactggagctgagataaaggtgccagtgaagttcattgttggagacttggatttgacatatcatactccaggcattcaggattttattcacaaaggtggcttcaaaaagtatgtaccgctgctggatgatgtcgtggtcatgaagggtgtcggccacttcatcagtgaagaaaagccaaaggaagttagtgagcatgtaatcagcttcataagaaagttatcggctgaaatgtgattattcatcatgaaattcagagtgagataaaaataattgcaatgtattcttgcgtgcgaaccgtaaagtatgttagcttgcatttggaggatgtggggcgcgtaatgctcatgaattggtgcaattagtaaagtgttcgatttgtac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0273800, RefSeq:Os05g0273800