Os09g0536700

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0536700| Description = Nodulin-like domain containing protein| Version = NM_001070322.1 GI:115480386 GeneID:4347702| Length = 3382 bp| Def...")
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Gene Name

Os09g0536700

Description

Nodulin-like domain containing protein

Version

NM_001070322.1 GI:115480386 GeneID:4347702

Length

3382 bp

Definition

Oryza sativa Japonica Group Os09g0536700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21942588..21945969

Sequence Coding Region

21942986..21943463,21944545..21945725

Expression

GEO Profiles:Os09g0536700

Genome Context

<gbrowseImage1> name=NC_008402:21942588..21945969 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21942588..21945969 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcggcggcgctggacgcgatggcggggacgaggtgggggaggtggctggggctcgtgacggcggtgtgggtgcagtgcatctccggcaacaactacaccttctccaactactcccactccatcaagacgctcatgggcctcacccagctgcagctcaacggcctctccgtcgccaaggacgtcggcaaggcgttcggcctcctcgccggcctcgcctccgaccgcgtccccacctggcttctcctcgccgtcggctccctcgagggcctcctcggctacggcgcgcagtggctcgtcgtgtcccgggccgtcgcgccgctgccctactggcagatgtgcgtcttcctctgcctcggcgggaacagcacgacgtggatgaacaccgccgtgctcgtcacctgcatccgcaacttccgccggagcagggggccggtgtccgggttgctcaagggctatgtggggctcagcacggcgatcttcaccgacgtctgctccgcgctcttcgccgacgacccggcctcgttcctcgtcatgctcgccgtcgtgccggccgcggtgtgcgcggtcgccatggtgttcctccgcgagggggaggttggcggcggcggcgcggacgggcgggaggaggaggaggaggatgggtggtgcttcgccgcaatcaacacgctcgccgtcgccatcgcgctgtacctcctcgccgccgacctcaccggcgtcgggggaggcggcggggtcgtgtcggccgtcttcgtggccgtcctccttgtgctcctcgcgtcccccgccgcggtgccggcgcacgtggcgtggaagtcctggatgaagacgcggaagctcgcgaacgccgacgtcgaggaggcggaggagtgcgcgtccgccccgctcctcgtggcgaaggcgacggcggcggcggcggcggaggcgcgcggccccggcgagaagccggtgctcggggaggagcacacgatcgcgcaggcgctcatgtcgctggacttctggctcatgttcgcgtcgttcctgatgggcgtcggcacggggctcgccgtgatgaacaacctggggcagatgggcgtcgccatgggctactccgacgtctccctcttcgtctccatgaccagcatctggggattcttcggccgcatcgcctccgggaccatctccgagcacttcatcaagacaagagcaattccacgccccttgtggaatgcagcttcgcaaatcctgatggccgtgggctatgttgtgatggcagttggtatgccaggctccctcttcgtcggctccgttgtggttggcatctgctacggtgtccgcctggcggtcaccgtgccaacagcatctgaactgttcggtctcaagtactacggcctcatctacaacatcctcattctcaacttaccactcggctccttcctcttctctggccttcttgctggcctcctctacgacgcgcaggccaccaaggtacccggtggtggcaacacctgtgttggtgcgcactgctaccgcctcgtgttcgtggtcatggcgattgcctgcgtcgtcgggttcggtttggatgtcttgctgtgcttcaggaccaagagggtgtatgccaagatccatgagagcaagaggcagagcaggtcggcagttgtgcagagggtaagctag</cdnaseq>

Protein Sequence

<aaseq>MVAAALDAMAGTRWGRWLGLVTAVWVQCISGNNYTFSNYSHSIK TLMGLTQLQLNGLSVAKDVGKAFGLLAGLASDRVPTWLLLAVGSLEGLLGYGAQWLVV SRAVAPLPYWQMCVFLCLGGNSTTWMNTAVLVTCIRNFRRSRGPVSGLLKGYVGLSTA IFTDVCSALFADDPASFLVMLAVVPAAVCAVAMVFLREGEVGGGGADGREEEEEDGWC FAAINTLAVAIALYLLAADLTGVGGGGGVVSAVFVAVLLVLLASPAAVPAHVAWKSWM KTRKLANADVEEAEECASAPLLVAKATAAAAAEARGPGEKPVLGEEHTIAQALMSLDF WLMFASFLMGVGTGLAVMNNLGQMGVAMGYSDVSLFVSMTSIWGFFGRIASGTISEHF IKTRAIPRPLWNAASQILMAVGYVVMAVGMPGSLFVGSVVVGICYGVRLAVTVPTASE LFGLKYYGLIYNILILNLPLGSFLFSGLLAGLLYDAQATKVPGGGNTCVGAHCYRLVF VVMAIACVVGFGLDVLLCFRTKRVYAKIHESKRQSRSAVVQRVS</aaseq>

Gene Sequence

<dnaseqindica>2507..2984#245..1425#gcttacatgcaaaaaaactcccataaacccctcctcttcgagaaaatccctttttgttcaaccacgacgcgaattcccaagcaacccccccacacccagctgagtagctgacgcagcaccagcagtcgcggggaaagggacacgtctcgccgccccagcttcccgcctccctcccatcccgccgccgcggacgcgtccaagccacagcaacagcaaccactccgacgaacacctcgcctgcgcgatggtggcggcggcgctggacgcgatggcggggacgaggtgggggaggtggctggggctcgtgacggcggtgtgggtgcagtgcatctccggcaacaactacaccttctccaactactcccactccatcaagacgctcatgggcctcacccagctgcagctcaacggcctctccgtcgccaaggacgtcggcaaggcgttcggcctcctcgccggcctcgcctccgaccgcgtccccacctggcttctcctcgccgtcggctccctcgagggcctcctcggctacggcgcgcagtggctcgtcgtgtcccgggccgtcgcgccgctgccctactggcagatgtgcgtcttcctctgcctcggcgggaacagcacgacgtggatgaacaccgccgtgctcgtcacctgcatccgcaacttccgccggagcagggggccggtgtccgggttgctcaagggctatgtggggctcagcacggcgatcttcaccgacgtctgctccgcgctcttcgccgacgacccggcctcgttcctcgtcatgctcgccgtcgtgccggccgcggtgtgcgcggtcgccatggtgttcctccgcgagggggaggttggcggcggcggcgcggacgggcgggaggaggaggaggaggatgggtggtgcttcgccgcaatcaacacgctcgccgtcgccatcgcgctgtacctcctcgccgccgacctcaccggcgtcgggggaggcggcggggtcgtgtcggccgtcttcgtggccgtcctccttgtgctcctcgcgtcccccgccgcggtgccggcgcacgtggcgtggaagtcctggatgaagacgcggaagctcgcgaacgccgacgtcgaggaggcggaggagtgcgcgtccgccccgctcctcgtggcgaaggcgacggcggcggcggcggcggaggcgcgcggccccggcgagaagccggtgctcggggaggagcacacgatcgcgcaggcgctcatgtcgctggacttctggctcatgttcgcgtcgttcctgatgggcgtcggcacggggctcgccgtgatgaacaacctggggcagatgggcgtcgccatgggctactccgacgtctccctcttcgtctccatgaccagcatctggggattcttcggccgcatcgcctccgggaccatctccgagcacttcatcaagttcgtctccttctcccatccctttccccttccatctccgtacacaaaattgaaccgcaaaatccccagcgcttattattccaaaaaaaaaaatccccagcgcttactgtcgccatagatccgtagctccgtagcacggattaggtgtggcattttctttcgctagagttggaatcttggagcccactagcccgccattggtgatggatgggtgctgcaaccatgtcggcatccgtagtggtggtgcccaggttggagcaaggcgagcatttccaagacagagtcaagatggtcaatagaatttcagatattgcaacttgcccactttaattgtagtactatagtatgatcattatactaagctgtaggattcccagattccctcggatacatctgcctaggaataggatggatcaagttgacagactgagagaacgagagagcttagttgggattggggaaaatggaggttttggttctagttgggaatgggggaactgaagggtttggttcttgattcctttggaaggatggcttacactaatctgcaatataattagcaattgtagagacaaataatcatctttaggtatctgcacctgctggttagaatggtgataagatagcagtagcacaagttgtgtttaagctgtaccccgtagtacttatctgcaggtactatccatggagaattggtagtcctatgctttcagtggtcactacctaagtacctaactgcagtccatactatatggttactcaattcacatgtatagagtacatgttacctttctgtgttagtggtcatgtgtgcatagcacatcatgtacagctggtgtttccattaagaactgttatcggattatcaacattggcttccttttcttttttggatcaacctattctggaagagcaattcgacatattattagtctgaccaaatttatgtaaaactagggagtcaatgtctacaacttaatgtgtccacttcgtagtcttaatccaatgttcatttcatttctgtatgcgtttccctttcctcaaatattttgctgagcttctgaacgtgacaaaatttcaggacaagagcaattccacgccccttgtggaatgcagcttcgcaaatcctgatggccgtgggctatgttgtgatggcagttggtatgccaggctccctcttcgtcggctccgttgtggttggcatctgctacggtgtccgcctggcggtcaccgtgccaacagcatctgaactgttcggtctcaagtactacggcctcatctacaacatcctcattctcaacttaccactcggctccttcctcttctctggccttcttgctggcctcctctacgacgcgcaggccaccaaggtacccggtggtggcaacacctgtgttggtgcgcactgctaccgcctcgtgttcgtggtcatggcgattgcctgcgtcgtcgggttcggtttggatgtcttgctgtgcttcaggaccaagagggtgtatgccaagatccatgagagcaagaggcagagcaggtcggcagttgtgcagagggtaagctagccaaaacctacagctatgagaaaaatggtacagattcgcgcaattgcatcaagattcaatgattcaacgagtgcaggttctgtaaattttgtgcaaataagaggatcccatgtcttgattctttggaattagatggatggatccattcaatcggtatagtttaactgccacggaggtttctaggggctgattcgagcaatgtttgccctgtgtgtgtaattcagtactagtactgactactactgactgagaggctgcagattgtggagttgtctgatccctcggtgtaatcagtttagtcagtgtatccttgaggaaatgtattctcggttttagcctgtacgatgaattgttgtgcaattagcctgttggcatataaattcagatcaattcaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0536700, RefSeq:Os09g0536700