Os05g0279400
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os05g0279400 |
|---|---|
| Description |
Zinc finger, RING-type domain containing protein |
| Version |
NM_001061619.1 GI:115462968 GeneID:4338285 |
| Length |
5819 bp |
| Definition |
Oryza sativa Japonica Group Os05g0279400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:11671617..11677435 |
| Sequence Coding Region |
11671825..11671992,11672796..11673104,11674389..11674597,11674684..11674732,11674848..11674935 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:11671617..11677435 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:11671617..11677435 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggacgacagctgcgcggtgtgcgcggacgcgctggagtgggtggcctacggggcctgcggccaccgcgaggtttgctcgacctgcgtcgttcgcctccgcttcgtgatgggcgacaagcactgctgcatctgcaagaccgagtgctcctccgtattcgtcaccaaggctatgggcgattacacaaaagtgataaatgatttcaatattttcccccctgtggcaactgagggaaaggtgggggagtactggtaccatgaggatagccaggcattttttgacgatgctgagcactacaagatgatacgagcaatgtgtcggctttcttgtagtgtgtgtgacaaagctgaagatcaggctggccaggcagcacaagtaaggcgcaaaagcaagttcaggagcattgaacagctgaagggacatttgttccatcaacataggttatacatgtgcagtctttgcttggaggggagaaaggtgttcatttgtgaacagaagctttatacaaggacacagttaaatcagcatgtaaaaactggtgactctgaggtggatggctctgaggttgagcgcagtggttttgcaggacatcctatgtgcgagttctgcagaagttcattttatggagataacgagctttacacacatatgtcccgagaacactattcatgtcacatatgtcaaaggcaacatcctgggcagtatgattatttccggaattatgatgacttggagttgcatttccgtaaagatcatttcctctgtgaagatgaagcatgtttggcgaagaagtttgtagtcttccagagcgaagcagagctcaagagacataatgctatggagcatggtgggcggatgtctcgtgctcagaggaatgccgcacttcagataccaaccagctttatatatcgaagaaacgagcaagatgaaaggcgtggtagaggtaggggacggaattctcaccgtgatggatctgaccgggataccccctctatgcaaaatggcagtgcaattataggcaacggttttccaagtcgagttgataatgttacagggtctgtgagtgtcagttctagttctgggcgaggagaatctggccaaagctcaggcaatggacgtgtgtttgaacacttgtcctttcctcctcttcaagaccaggatattcctgatgcaaggatggactctgctcctgatgaaacctcattcccttccctctcagagcagcaaaccagatatgctcatgctcttagtcagagttcccttgctgccaagcttggggatgagttattattccctccactacctgggtcaagtagcaacaggggttctacttcaactcaacaggggctacaaagtctagcgaagaacacacttgcatcaaggcttcagcagcgtagcaagggcagtgtgaaagtacttcattctgcccggcctcgcccatctgaaaatcctgaatcagtccctcctgtttctagttccccacagatgtggcctacacctgatcaggggctgcttcattctagttcttcccagcttcgaattgtaagagaaaatgggattatgtcatctgccgactcggcatggaatcctggaggtggagcttcaaacaggatgaagcactctgtttctactcctaatcttatgtctggtgggtcctctgttcaggcactaagtacatctaacggtggcaataaaaaacaacagccaccacaaagcagccaaacattgcctgctgctgatgatgttcgtgctgccaataagaccctggttgaaagaatgcgcagtgctttaggcatggatgaagataggtactctgcatttaaagaaatcgctggtgaataccgtcaaggcatcattggtacttcagaatatctttcatatgttgagcaatttggtctgtcacaccttgtgcctgaaatggctaggctgttacctgatcctcagaagcagaaagaacttgctgatgcctatcacaccaatatacgcttcagaagcctccaagagaacagtgatggtttaaccattacctcaaaggagggtggccgcaagaaaaagggcaagggaaaatctcatgatgttacagaaactagtgctgctcctgctaaggatatgaaggattcactagcagatagcttcctggacactgtaaggaagcttcagttaaacaagactcaggaaggagaggctgaggtgctgtcaagggatgggtatcgatcttccaagggaaaggcccaactaataactggaggttcatcatctagtacaccatgtctagatggtgatcatggtgccatttcaatggcttcttgtgccaaagatgatgtaggcaagggaggaggtagcagcaacagcaacatcaacaaacaatcaaagaagacatcaaagtttctcagagcccgattaggtgataactccttagctacacttgatttgagtcgtcctaccatgagccctgaacgaccagaaagggaatcgcaaggcccacaggtagggttgcctatgcgaggtgtttggaaaaatggagggggccagaagctctttacgggcaatggaaggaagtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MDDSCAVCADALEWVAYGACGHREVCSTCVVRLRFVMGDKHCCI CKTECSSVFVTKAMGDYTKVINDFNIFPPVATEGKVGEYWYHEDSQAFFDDAEHYKMI RAMCRLSCSVCDKAEDQAGQAAQVRRKSKFRSIEQLKGHLFHQHRLYMCSLCLEGRKV FICEQKLYTRTQLNQHVKTGDSEVDGSEVERSGFAGHPMCEFCRSSFYGDNELYTHMS REHYSCHICQRQHPGQYDYFRNYDDLELHFRKDHFLCEDEACLAKKFVVFQSEAELKR HNAMEHGGRMSRAQRNAALQIPTSFIYRRNEQDERRGRGRGRNSHRDGSDRDTPSMQN GSAIIGNGFPSRVDNVTGSVSVSSSSGRGESGQSSGNGRVFEHLSFPPLQDQDIPDAR MDSAPDETSFPSLSEQQTRYAHALSQSSLAAKLGDELLFPPLPGSSSNRGSTSTQQGL QSLAKNTLASRLQQRSKGSVKVLHSARPRPSENPESVPPVSSSPQMWPTPDQGLLHSS SSQLRIVRENGIMSSADSAWNPGGGASNRMKHSVSTPNLMSGGSSVQALSTSNGGNKK QQPPQSSQTLPAADDVRAANKTLVERMRSALGMDEDRYSAFKEIAGEYRQGIIGTSEY LSYVEQFGLSHLVPEMARLLPDPQKQKELADAYHTNIRFRSLQENSDGLTITSKEGGR KKKGKGKSHDVTETSAAPAKDMKDSLADSFLDTVRKLQLNKTQEGEAEVLSRDGYRSS KGKAQLITGGSSSSTPCLDGDHGAISMASCAKDDVGKGGGSSNSNINKQSKKTSKFLR ARLGDNSLATLDLSRPTMSPERPERESQGPQVGLPMRGVWKNGGGQKLFTGNGRK</aaseq> |
| Gene Sequence |
<dnaseqindica>209..376#1180..1488#2773..2981#3068..3116#3232..3319#3416..3480#3606..5279#gccgtgcgggccgccaacacaaggacgcgacgacaagggtggggggataagcggagagagagagaaaaaggaaaaactgtctcgtcgtctcgaaccttctcgcctccctcaccgccctaacccttcctcttctcctccgccgccgccaccgccgctccgccccctccgtcccttcgccgctaccgatctcccccgcccgcccgcggagatggacgacagctgcgcggtgtgcgcggacgcgctggagtgggtggcctacggggcctgcggccaccgcgaggtttgctcgacctgcgtcgttcgcctccgcttcgtgatgggcgacaagcactgctgcatctgcaagaccgagtgctcctccgtattcgtcaccaaggttcgtatcgtcgctagggtttcctccgccccggccaggttgtttgatctgtgccgtcgggagcgtcggtggatcttgggtcgtcggctggttagggtttcgatgggcttgaaatatggggctcttgctcgtgaaattgtatggttttatggtggtgaaaatttgttcgatttcacgaactaatgttgttggctaattatgtgaacttagcttattgtatgaattggttcctagggagttgggatttcagctaaaaacctaatgctactgagaagaagacaatgagtttaatcagcacaaatttatttaatcagaaatttgttttgtcaagcgattaggggtcggcaatttgagttcaggtgttaataatgggatgccatggttcctgtacttccttttttgatacatggcattgcaagctactattattcttacacttagtgtgaccgattatgatatttaggcttatgactgagctagaaatttttttatcgagctttattaatgtgagtttgttaggcttccctatctgagttatcagcattttttctgttgtgttttattagtgcaaagacaagcagaaaaaaaatgtgcaagtgttcctttaatgttttatgttttcactatgaatttcctttgctatttaatcgatggctgattgtgtaactcattggttactttctctgtttttttttataataaaattagactgaagtcattgtatagctaaaggattgcatgtgcagtcttcatatgaatttaaaattttaattatggctcattcatctttgatcattcaacaggctatgggcgattacacaaaagtgataaatgatttcaatattttcccccctgtggcaactgagggaaaggtgggggagtactggtaccatgaggatagccaggcattttttgacgatgctgagcactacaagatgatacgagcaatgtgtcggctttcttgtagtgtgtgtgacaaagctgaagatcaggctggccaggcagcacaagtaaggcgcaaaagcaagttcaggagcattgaacagctgaagggacatttgttccatcaacataggttatacatgtgcagtctttgcttggaggggagaaaggtgacattcttgacaacaatgtgctcttttctccttaaatagtcactgttggtttgattgtttcctgcattttaaaaataaaatcagcatgaagtcttaagagactgtcatggggaatgatctagctacttatgtggacatgctttgctcattgtgtgagcctagtaggtactacctctgtccctaaataagtgcacttctagcacccaaattttataccaaaataagtgcacccctagagtaagcttatcccatccatcacttcccattcaattttctacctattttacccccaactaccctcccacttctaaccatgactcatttaattgggggcttatatgtcatttatcttcctagtgatttgtctgccatgtgctaaatgcacttatttaggatgatggtagtagtaattaagtaatcttgactattgttgatatcactgcttttactatgtatgccatatgtaaatatgtaaaagatcggagaaatctataagtacttggtgaaagatcttttgctttccataaagtgttgcttttgctttgtgtgatgagttgactttttttggggggaaatggaattgaaattcttgcaaactaaagaaattgaagcagagatactttctcatgaggatggtaacatttagagtagttagtctatgtttaattgtggctacatgctacatagcccagtgccagttccccatcgtcacagttactgcatattctcattgctttaaaatgtaatgtgcttatggaattgtatgcatgacctcatagactggtggccagcttttgtcaactcggctagtccaccagggtgctgaccgatctcagtggtgtctaggttgtgctcggaactgatttcttgaatactggtccaatgcaaaccattccacttgagcattttttatctgtatgaataatttggtttactaacctagaagtatttaattaaaaccaatttatatcagttatgttggatacagtattaatgtagtaatataatattggggacacagaccatgctatttgaagtgaaagtaactgaagctgatgtctgtatgtttgaagctgagattgattttgtaatgtgcattttcaacccactgggaaggtagaaatgaaaagctttacgttaacaccctccaactataataaattatctattttgcccacacgcatattgttatcttgataacataggggctattttactacacttttaactaactgagacttgatggtagtttgtttgactagttgatgtgttgttggccaggtgttcatttgtgaacagaagctttatacaaggacacagttaaatcagcatgtaaaaactggtgactctgaggtggatggctctgaggttgagcgcagtggttttgcaggacatcctatgtgcgagttctgcagaagttcattttatggagataacgagctttacacacatatgtcccgagaacactattcatgtcacatatgtcaaaggtatcatcatgtacctcattacccttagctaaattgtactaacacgctatgtgatattctaacttacgattggtcattggttgcaggcaacatcctgggcagtatgattatttccggaattatgatgacttggaggtttgttggcacaaatggatatgttgcctttgttcgaagatgttttttttttcatttactctgttctgcaagcttttggtagcatcctaatgtatgttttattaattcaattcagttgcatttccgtaaagatcatttcctctgtgaagatgaagcatgtttggcgaagaagtttgtagtcttccagagcgaagcagagctcaaggcaagtatatttcagttagttgtattagctgctctgttactgcattagatgctaggttacttattttcatatttcttggcttgtttatttctccagagacataatgctatggagcatggtgggcggatgtctcgtgctcagaggaatgccgcacttcaggtatgtattagtcttagaatttctcattcttgtgcctaaggtttcccttttatcctgctcacctgtcttgtttgtactaatactggaattttctttgagctaatttttctgtttggctttgtcagataccaaccagctttatatatcgaagaaacgagcaagatgaaaggcgtggtagaggtaggggacggaattctcaccgtgatggatctgaccgggataccccctctatgcaaaatggcagtgcaattataggcaacggttttccaagtcgagttgataatgttacagggtctgtgagtgtcagttctagttctgggcgaggagaatctggccaaagctcaggcaatggacgtgtgtttgaacacttgtcctttcctcctcttcaagaccaggatattcctgatgcaaggatggactctgctcctgatgaaacctcattcccttccctctcagagcagcaaaccagatatgctcatgctcttagtcagagttcccttgctgccaagcttggggatgagttattattccctccactacctgggtcaagtagcaacaggggttctacttcaactcaacaggggctacaaagtctagcgaagaacacacttgcatcaaggcttcagcagcgtagcaagggcagtgtgaaagtacttcattctgcccggcctcgcccatctgaaaatcctgaatcagtccctcctgtttctagttccccacagatgtggcctacacctgatcaggggctgcttcattctagttcttcccagcttcgaattgtaagagaaaatgggattatgtcatctgccgactcggcatggaatcctggaggtggagcttcaaacaggatgaagcactctgtttctactcctaatcttatgtctggtgggtcctctgttcaggcactaagtacatctaacggtggcaataaaaaacaacagccaccacaaagcagccaaacattgcctgctgctgatgatgttcgtgctgccaataagaccctggttgaaagaatgcgcagtgctttaggcatggatgaagataggtactctgcatttaaagaaatcgctggtgaataccgtcaaggcatcattggtacttcagaatatctttcatatgttgagcaatttggtctgtcacaccttgtgcctgaaatggctaggctgttacctgatcctcagaagcagaaagaacttgctgatgcctatcacaccaatatacgcttcagaagcctccaagagaacagtgatggtttaaccattacctcaaaggagggtggccgcaagaaaaagggcaagggaaaatctcatgatgttacagaaactagtgctgctcctgctaaggatatgaaggattcactagcagatagcttcctggacactgtaaggaagcttcagttaaacaagactcaggaaggagaggctgaggtgctgtcaagggatgggtatcgatcttccaagggaaaggcccaactaataactggaggttcatcatctagtacaccatgtctagatggtgatcatggtgccatttcaatggcttcttgtgccaaagatgatgtaggcaagggaggaggtagcagcaacagcaacatcaacaaacaatcaaagaagacatcaaagtttctcagagcccgattaggtgataactccttagctacacttgatttgagtcgtcctaccatgagccctgaacgaccagaaagggaatcgcaaggcccacaggtagggttgcctatgcgaggtgtttggaaaaatggagggggccagaagctctttacgggcaatggaaggaagtaaaatcattttgcagatgcagtttgacttttgaaacgagctggtcaatggtacaagcagattctgttgccaagtgtgcatattttgtgatcagttggttagctggtcgtgggagagctttattgctcctttgaagatcatcgcctttgaattacacctcactttcttgttttctttgccaaaacatcaactgaggctgaaacttgaaacagtaatggcgtgatattacgttactggccagttagtggaatccattggtagatggtattttacatgagctctgccaaatattatagttactttatcactttgtttgtgctggattgcagtcaaagacatgtatttagtgtgtctgtgatcaggccgaccctaactgaattcgtgaaagttgaaatctcaatgttcttcgtgttatttaaacggaattgctagaaaactctttcgtaagttttttgctcccaaaacttttagatttgtgaccataggatcaccttgagatttgtgcatgaagggggaaaaatactataaagaaaatttcacagt</dnaseqindica> 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