Os05g0279900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0279900 |
|---|---|
| Description |
Similar to Polygalacturonase A (Fragment) |
| Version |
NM_001061621.1 GI:115462972 GeneID:4338287 |
| Length |
3009 bp |
| Definition |
Oryza sativa Japonica Group Os05g0279900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:11710813..11713821 |
| Sequence Coding Region |
11710813..11711430,11711532..11711576,11711766..11711973,11712068..11712149,11713317..11713821 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:11710813..11713821 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:11710813..11713821 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggaggaggaccttcgaggttgggcttgccgcggttgttgatggtggtggcgcttgtgcttctgccattgtgtggtttcggtgtccatggaaggaaccatatccacaagaagccgcatggcggcggtggcggaggaggccggcagcacaggggtggcggcacggtggtgtcctcccctgcggtcccaccggcggacgagcagacgcagccgcctggcattgtcccctcggacccggtcatccctgcccagccggagcagtgcgtgttcgacgtcagggcgtttggtgcggtgggcgacggcacgacggacgacaccgaggcgttccgggcggcgtggagggcggcctgcgccgtggagtcggccgtcatctcggtgccgtccgacggcacgttcaccatcaccacgaccacgttcaccgggccgtgcaagcccggcctcgtctttcaagtggatggggtgctgatgccgccggacgggccggactgctggccgccgtcggataaccggcggcagtggctcgtcttctccaacctcgacggcctgacgctgcgcggcgccggcacgatcgagggcaacggcgagggctggtggaatctcccctgcaagcctcacaggggtccgaacgggtcgacgctgcgcggcccgtgcgacagcccgacgttggtgaggttcttcatgagccgaaacctggtggtggagggcctgagggtggagaacagcccggagttccacttccggttcgacggctgcagcgacgtgcgcgtcgacgggctgtccatcaggtcgccggcgaacagccccaacaccgacggcatccacgtcgagaacacccagcgcgttgccatctacaactccatgatcagcaacggtgatgactgcatctcaattgggacggggagctacgacgtcgacattcaaaatgtttcttgcggccctggacacggcataagcatcgggagcttgggcgtgcacaactcgcaggcgtgcgtggcgaacgtgacggtgcggaacgcggtgatccggaactcggacaacgggctgcggatcaagacgtggcagggcgggatggggtcggtgtccgggatcaacttcgacacggtgagcatggagaacgtgcggaactgcatcatcatcgaccagtactactgcctggacaagcggtgcatgaaccagtccaccgccgtgcacgtcaccgacgtctcctacgccaacgtccggggatcctacgacgtccgcgcggccccgatccacttcgcctgcagcgacaccgtcccctgcaccaacatcaccatgtccgaggtcgagctgctccccttcagcggcgagctcgtcgacgacccattctgctggagcgcctacggcctccagcagacgcccaccatcccgcccatctactgcctccaggacggcctgccggactcgctcctcgacaacccggacctcagatgccgatga</cdnaseq> |
| Protein Sequence |
<aaseq>MGGGPSRLGLPRLLMVVALVLLPLCGFGVHGRNHIHKKPHGGGG GGGRQHRGGGTVVSSPAVPPADEQTQPPGIVPSDPVIPAQPEQCVFDVRAFGAVGDGT TDDTEAFRAAWRAACAVESAVISVPSDGTFTITTTTFTGPCKPGLVFQVDGVLMPPDG PDCWPPSDNRRQWLVFSNLDGLTLRGAGTIEGNGEGWWNLPCKPHRGPNGSTLRGPCD SPTLVRFFMSRNLVVEGLRVENSPEFHFRFDGCSDVRVDGLSIRSPANSPNTDGIHVE NTQRVAIYNSMISNGDDCISIGTGSYDVDIQNVSCGPGHGISIGSLGVHNSQACVANV TVRNAVIRNSDNGLRIKTWQGGMGSVSGINFDTVSMENVRNCIIIDQYYCLDKRCMNQ STAVHVTDVSYANVRGSYDVRAAPIHFACSDTVPCTNITMSEVELLPFSGELVDDPFC WSAYGLQQTPTIPPIYCLQDGLPDSLLDNPDLRCR</aaseq> |
| Gene Sequence |
<dnaseqindica>1..618#720..764#954..1161#1256..1337#2505..3009#atgggaggaggaccttcgaggttgggcttgccgcggttgttgatggtggtggcgcttgtgcttctgccattgtgtggtttcggtgtccatggaaggaaccatatccacaagaagccgcatggcggcggtggcggaggaggccggcagcacaggggtggcggcacggtggtgtcctcccctgcggtcccaccggcggacgagcagacgcagccgcctggcattgtcccctcggacccggtcatccctgcccagccggagcagtgcgtgttcgacgtcagggcgtttggtgcggtgggcgacggcacgacggacgacaccgaggcgttccgggcggcgtggagggcggcctgcgccgtggagtcggccgtcatctcggtgccgtccgacggcacgttcaccatcaccacgaccacgttcaccgggccgtgcaagcccggcctcgtctttcaagtggatggggtgctgatgccgccggacgggccggactgctggccgccgtcggataaccggcggcagtggctcgtcttctccaacctcgacggcctgacgctgcgcggcgccggcacgatcgagggcaacggcgagggctggtggaatctcccctgcaagcctcacagggtactgcacaacactttttttttttttgtctccgattcatccagctcgctcgtctcaacactggctctgaatttgcattggtgactctgaattcggtgcagggtccgaacgggtcgacgctgcgcggcccgtgcgacagcccgacggtacgcatcaccatcaccatcaccatgagcacaaactagctagctagctcatcgacaccatacatattgttgacacatatgtcgtttgtgttatttttatctttatttttttattaaacttatggttgtgccggatatgtaatccattttcattatctaaaaattatgtcgtttgtgttggtggtgcagttggtgaggttcttcatgagccgaaacctggtggtggagggcctgagggtggagaacagcccggagttccacttccggttcgacggctgcagcgacgtgcgcgtcgacgggctgtccatcaggtcgccggcgaacagccccaacaccgacggcatccacgtcgagaacacccagcgcgttgccatctacaactccatgatcagcaacggtatgttctactctcattgacgccttttttctttccttacgttgttctttttctaatgtgacatgggaaatgacatgtcttccggccggtgtaggtgatgactgcatctcaattgggacggggagctacgacgtcgacattcaaaatgtttcttgcggccctggacacggcataaggtacgtaggtagaacccattattctcctctatctgttttatttacttatttattttttccaatattaaattctaatattggattgaagagggagaaaaaaagcagaataacttatgcatcacttggtcccgttccttttttggttgttctctcttctctcatttataataaattcggttcacaaacagttttgtttgtgtacatacgttgccggcgatcaatatgttgcttggatgtgggcacggggcaacctgcaatcctgactatacggttcaggagaaagcagcaaagcgtcagaaacatccaaagcgtataaaacgcatgacggcatcagcttagctaccacccgtccaccctttgtttctgctcgtcttgttctgccttatgatccgctggtgtcctagattacttccagaatttttagtttttttttagaacatccagaattttttgttggtcactcacgtcctcacaggaagagtgagatgctgaagtaaatggagagagagacaagaaaagttggccacatgcatgaagaatttagttcacatgatcgacttcacgtgttcagagaatggaggcatagacatacctgaacaccaccttttcctttaggagtacaatccttcaacaattaagaagaatccaattttgagcaaattccgtgtttgatttcattctctgctgctgccggtgcttagtacagatgagtgcggaaaatttacgctagcatatataggagcatataactcctacagagcattgcagttttgcatttcagacgtctgtgaggtacgtaatgacgacataggtgtctgatagataattgattgatatattattagggagtgttaaaaatatgtttaagttttacgagtaaaaaacttttagatgtaactatagcataattaaagtattaaagtgtaattacatagtaaactgcattttaactacgatacaacttatataaaatttgcatttaactatagtttagttagctagcactgggaacttatgcgtgacttgtaaaaaaattattttcagcaatttttttttcatacacaaatctcgaaacgatcggatgatcacaaatctgaaaattttagaagcaaaaagcttacgaaagttttctagtaaatccatttggttttggtggtgcatgtgcagcatcgggagcttgggcgtgcacaactcgcaggcgtgcgtggcgaacgtgacggtgcggaacgcggtgatccggaactcggacaacgggctgcggatcaagacgtggcagggcgggatggggtcggtgtccgggatcaacttcgacacggtgagcatggagaacgtgcggaactgcatcatcatcgaccagtactactgcctggacaagcggtgcatgaaccagtccaccgccgtgcacgtcaccgacgtctcctacgccaacgtccggggatcctacgacgtccgcgcggccccgatccacttcgcctgcagcgacaccgtcccctgcaccaacatcaccatgtccgaggtcgagctgctccccttcagcggcgagctcgtcgacgacccattctgctggagcgcctacggcctccagcagacgcccaccatcccgcccatctactgcctccaggacggcctgccggactcgctcctcgacaacccggacctcagatgccgatga</dnaseqindica> |
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