Os05g0293500
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0293500 |
|---|---|
| Description |
Similar to Pectate lyase B (Fragment) |
| Version |
NM_001061641.1 GI:115463012 GeneID:4338309 |
| Length |
5276 bp |
| Definition |
Oryza sativa Japonica Group Os05g0293500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:12910906..12916181 |
| Sequence Coding Region |
12911008..12911226,12914738..12914867,12915396..12916168 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:12910906..12916181 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:12910906..12916181 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctgccatcttcatattcatatggttgttcgcctccgttttatccatttcatcagcttcttctcctttgctgatcaatggtagtactgctgatgctgcaccggactgcggtaccggcaacccgatcgacgactgctggcgttgcgaccccggctgggccgacaaccggcagcggctcgccgactgcgccgtcgggttcggccgccgcgccgtcggcgggaaggggggcagggtgtatgtcgtgaacgacaccggcgacgacgcagcccgcccggcacccggcacgctccggtacggcctcgtccaggacgagcccctctggatcgtgttcgccggcgacatgaccatcagccccgcccacgagctggtcgttagctcgcgcaagaccgtggacggcaggggcgcccgcgtggtggttggcgacggcggcgcgtgcttcgcggtgaggggcgcgagcgacgtcgtcatccacgggcttaccatacgccggtgcaggccggcacccaagctggaggccggcatgtcggacggcgacggcgtccacaactcgagcgacgtgtgggtcgaccactgcacggtggaggcctgcgccgacgggctgatcgacgtggtcgtaggttccacccgcgtgacgctttccaacaacctcctgcgcaaccatgacaaggcaattctcctcggccacaacgacgactacaccgacgacaaggccatgcaggtcaccgttgccttcaatcgctttggaccaggcctcgtccaaagaatgccaaggtgtcggtttggtcttttccacgtcatcaacaacgattacatagcatggcaaaagtacgccattgggggcagtgcttcaccgaccataattagccacggcaacagattctatgctgatatggccaaagaggtgacgaagcgcgatgacgatgtgccggagagcgtgtggcaccactggaactgggtatccgacggcgacctgatgctcaacggcgcgttcttcagggcatcaggcgaagcaaggacagataatttgaaagcccctagctttgcaaggtctgccccctccgtgccgtcgatgacttcctcggcaggcgccctctcctgcaaggagggctcgcactgctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAIFIFIWLFASVLSISSASSPLLINGSTADAAPDCGTGNPID DCWRCDPGWADNRQRLADCAVGFGRRAVGGKGGRVYVVNDTGDDAARPAPGTLRYGLV QDEPLWIVFAGDMTISPAHELVVSSRKTVDGRGARVVVGDGGACFAVRGASDVVIHGL TIRRCRPAPKLEAGMSDGDGVHNSSDVWVDHCTVEACADGLIDVVVGSTRVTLSNNLL RNHDKAILLGHNDDYTDDKAMQVTVAFNRFGPGLVQRMPRCRFGLFHVINNDYIAWQK YAIGGSASPTIISHGNRFYADMAKEVTKRDDDVPESVWHHWNWVSDGDLMLNGAFFRA SGEARTDNLKAPSFARSAPSVPSMTSSAGALSCKEGSHC</aaseq> |
| Gene Sequence |
<dnaseqindica>4956..5174#1315..1444#14..786#aacaaaaacaagaatggctgccatcttcatattcatatggttgttcgcctccgttttatccatttcatcagcttcttctcctttgctgatcaatggtagtactgctgatgctgcaccggactgcggtaccggcaacccgatcgacgactgctggcgttgcgaccccggctgggccgacaaccggcagcggctcgccgactgcgccgtcgggttcggccgccgcgccgtcggcgggaaggggggcagggtgtatgtcgtgaacgacaccggcgacgacgcagcccgcccggcacccggcacgctccggtacggcctcgtccaggacgagcccctctggatcgtgttcgccggcgacatgaccatcagccccgcccacgagctggtcgttagctcgcgcaagaccgtggacggcaggggcgcccgcgtggtggttggcgacggcggcgcgtgcttcgcggtgaggggcgcgagcgacgtcgtcatccacgggcttaccatacgccggtgcaggccggcacccaagctggaggccggcatgtcggacggcgacggcgtccacaactcgagcgacgtgtgggtcgaccactgcacggtggaggcctgcgccgacgggctgatcgacgtggtcgtaggttccacccgcgtgacgctttccaacaacctcctgcgcaaccatgacaaggcaattctcctcggccacaacgacgactacaccgacgacaaggccatgcaggtcaccgttgccttcaatcgctttggaccaggcctcgtccaaagaatgccaaggtaactcattccatgtttacagtgttactaactctgctctgaaatagatgaaccctagaatacgtgtagttaaatctcaaaatcttaaataatggagactattatgattttgcatgtgaaaattgcgttggtagatttattgtgaaaaacatattattcatatagttacagtatttatagattttgaaagaatgcattttaaagaaataatgataaaacttgtgcattgaaaattaagtactaccctccatttcatattataagtcattttgactatttttatactataacttatttcaaataaattaggattttgcatgtgaaaattgcattggtagatttatcatgaaaaacatttttttcagatagttacagtttttgtaaattttaaaagagtatatattaaagatataataatgataaaactttgcattgaaaacgaggttgaaaactaccaaagaacaaaagaacggagttagtagcagaaaattttagttcaatagtgttttttttttcattacgtgccaggtgtcggtttggtcttttccacgtcatcaacaacgattacatagcatggcaaaagtacgccattgggggcagtgcttcaccgaccataattagccacggcaacagattctatgctgatatggccaaagaggtatataaacttgcccattttaaactttttcgttcggtatgtagtatacgtggtgtgtaaatggcagatataatggtgacatatatatcacgtaataagggcatgttcagagtgatgatattttcaaccatatcattatttggtaaaattgataattatgtagctagatttagtttgttactccctccgtcctaaaataagtacaattttatactgtttatgtccaacgtttgaccgttcgtcttatttgaaattttttcatgattagtgtttttattgttattacatgataaaacatgaatagtactttatatatgactttttttaaaagttttttcataaatttttcaaataagacgagtggtcaaacattggacacagatacccacggctgcacttatttttgtatggaggtagtaccaaatattggtaatgtgtatagagttttggcaatattattatgccaatcctaccaaattttggcaatgttgccaatttgtaaaattttggcattttcaaattatggtaaggttcattttggcgcaaaaaatgtttcaaccacatatatctatcttacatctatccattagctgaacacttcctagaagcttccagaaaaatctagcaattcattagatatcgtacgtattgccatgatcatacatctgcatttaacattacgggtcacatgaaaaacccatctattatgagttatgaggttatgacaacccaatatataaattaaatataaaatcaggaactactaaatatatatactacttaaaaatttaaaacgtttccttcatctgaccaaataaaaaaataacaaaaaaaacccttaaaaatgtctgattccccaaagtagcgaaaagtccgattcctataaaagacgaaaaataaaaaaaaagtggcaaaaaaatagatccaattcccttaaaaagaaaaaacaaaaatccgattcatataaaggcgaaaataaaaaaatcccaaaaaaagccaaaaaaacataaagaaaaggtccatgcgatttcctaaaaaaagggtcgtaaacaataaaaaacacgtgagaaaaaaatataaaaaggacaaaaaaatgcgcggcaaaaaataatccaatttcttttcgttttagtaatccgtatatatctcttctctacatctaatctaactatttaaaaagagaagctttcatcgtacaactgaacaaaaaatacgcgagaaaataaaaaatgttttaaaaaacgcatgagaaaaaaaaggaaaaaacgtgtgagaaaaaaatgtcagaaaaagtgcaaaaaaagcgtcaaaaaaaggttttccatcgtttgtaaaaaataaaacaaaaaacatgcaaggaaaaaactgtcagaaaaaacgcgtaaggaaaaaacaccgtttataaaaaaacaagctgctctgaaaaactatcagaaaaaacactaaattgatgggcgcttgtgtctgataggatccatcgattttttttccatttcctacacgggttttgtttcgtcatctattctcgtgtactggaaaagagcaaaaaaaaaacactcgaaaaaacaagacgaaaaacacgtgagaaaaaaatgtcagaaaagcataacaaacatgctaggaaaaactgtcagaaagaaatgcgccatttctgaaaaatggtttgagaaaaccacgcaagaaaaaaaacatcgtttataaaaaacaagccgctctgaaaaaactgtcagaaaaaacaccatttataaaaaaggggtcaaaaaacaattggattcaacgcgagaaaaaaccgttgtttctaaaaacggttcaagaaaactgtctaactcaacgcgagaaaaatatcagcatttataaaaaaaggttagacaaaaccgtctgactcacgagaaaaaaaaatgtcatttataaccagaatcgctccgaaaaaccgtttgactcaacacgagataaaattgatggacgcttgagttggataggatacattgattttttttcatcacctacacggcttttgccatcttcgaggttgggccattacattgaagatgttccaattttctaattgtcgatcttagctacaaacgatccctacaaacattgtcattgacattgttatgcatgaaaagcctatattatcattagaacttttcacccgttgcaacatcactggcatttttgctagtcataattaaaaaaaaaaactatagaagagactccataccgagtaccactccttaattattaatgtccaattttatgaatttttcaagcattttataatttagaccctaaactgagtacaactcattgataattaatttttggcatttattgtatcatgccaaatgtataattgagacaccaaccaaaacactacttagtatttgctagttttaattgagtctgaattccagccttattaaaacaatacaaaagaagctctaaactaagtataactcaatatttattaattacaaatttcagagtggttaaatcataaaaagatcttttaataattttaaacattgaacaatacttgtgtaacgtacgggcttacaactagtttgaataattaattatggattcttcctatcactcacacaagattccaaaattttggagcggaacgaaagaacaaatgttgccgaaatttcaaactgaaaaaaaaatctaaaatattgacaagttccagctaaatttgagcaaaattatctagataataaagctgagaatttttggctagaagaatatccttctggttgggttcagaaagttttcggttcggacgtgttttagtgtcggtcaaaatgtatttagaaattttcgaaaatagaaacaaatttgattttttttttggaaagcaggaatgaatacaatgaggctattatcggtgaaaaactggaatcaattagaaactttaaaaaataaatttagattttttttaataaaaaacaaattatttttcatgttcagacttatattaagtattgaggtggatagtgatattttttctttttaccttgcgactattttttgttttatatgttcgtgccatttgtagatggatatagttcttgttgtagttctatggggaagtgaatgcgaagtatacagctaaaagttgtattatttgtaattgttaaatattcgaaatgtaaaataatgaggcacatctcttcgttgatttgagaaggttagttagagtttttttttaatattttgataaatattcgttaccttgttttctctggttcgtatttgaaaatatttgattccagtttttatccaggtttgcaatttcgattatgattttaaaaaaaggaaacggaaatagtggagcttgtttacgtccatttttgcgccgttttcctcccttattgggaccaatatttcacaattttgaaactgaaacatggaaccctgccgctacacaattcaccattggttgcgtgcagctttcacttattttgtaaatagtgttgacaaaaccggtgcaaattttccgcaggtgacgaagcgcgatgacgatgtgccggagagcgtgtggcaccactggaactgggtatccgacggcgacctgatgctcaacggcgcgttcttcagggcatcaggcgaagcaaggacagataatttgaaagcccctagctttgcaaggtctgccccctccgtgccgtcgatgacttcctcggcaggcgccctctcctgcaaggagggctcgcactgctgagatcagctactgctgcattcgatgatttttctttctggatgtaatagttgcataggatcgaacaagattaaacaagcctatcagaagatgtgaatggcagcg</dnaseqindica> 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