Os05g0251900

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0251900| Description = Oligopeptide transporter OPT superfamily protein| Version = NM_001061566.1 GI:115462862 GeneID:4338223| Length = 593...")
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Gene Name

Os05g0251900

Description

Oligopeptide transporter OPT superfamily protein

Version

NM_001061566.1 GI:115462862 GeneID:4338223

Length

5931 bp

Definition

Oryza sativa Japonica Group Os05g0251900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:9228073..9234003

Sequence Coding Region

9228073..9229200,9230124..9230310,9231149..9231246,9231373..9231539,9233667..9234003

Expression

GEO Profiles:Os05g0251900

Genome Context

<gbrowseImage1> name=NC_008398:9228073..9234003 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:9228073..9234003 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgcgatgatcggcgatcccatgtcagcgacatcggtggaggcggtgttcgagaagcagccatcgccggaattcagggagctggtgacgccacgggccatggccgtggcggtggtgctcagcgtcgtcatctgcttcgtcggcatgaggatccagatgacggccgggatagtgccggcactcaacatgcctgccagcatcctcagcttcttcctcctcaagtggctcatcaggctgctacagagttgtggctttcccatgctgccattcacacgccaggaaaatatgttcctcctgacttgcatcatcacctgcctcaacctggccctcacaagtggttttgcgaccaatatcattggaatgacttctacggtggccagatcacttgctgatgatccagatccaagagatattatggaccatgtaccaatcggaaaatggatagtatacctattccttgttggtatgacgggagtgttaataaatgtgccatttaaccaggtcatgattattgactacaaattactatttccaacaggaacagttatagctcagcttattaatagctttcatacccctgaaggagcttacgtagcaaagttctactttgatttctctgcgacatatattggtctgggaatgatttgtccacatatagtaaattttggattattttttggggccatcatctcttggggatttctatatcctttccttgaaactaaacgtgggcaatggtatcaaactgacagccctacaagtttgaatggacaaaatggatacaaggtgttcatcagtgtgacactgatcattactgatgggatgataaactttctaacactcatcactacagcatcaattaacttctatcaattaaggaaagagcatgatttagggcttgccaactatttcaagaaacacccaagcctcaactatgatgatcgcaagaggattgaggtgttcttggctaaccggatcccaatccctgtgccagtggcagcctatatcacatgtgcagccatcagcacgattgcaatcccagccatgttcaaccagatcaaattctaccatctggccgtgctttacatggtcatcccagtcgtgaccttctgcaacacctatgcgacagggctcaccgactggtcggtggcaccaacctatgctaagtttaccaccttcgtctttgcagcatggatcgccaagcctggcgctgtcgtggccagcctccttgcgagcggggtgatcgtggcggcactccacatctcgtcgcaagcgatgcaggacctcaagtcgggccacatgacgctaacgtcgccacgcgccatggtcaccggacagatcttcggcgtggccgttggctccatcctctgcccatgcgtcttccttgccttccagtccacaacgaagcccaacgcaccggtgggttcaaagcagtccgattacccatgccctttcgcgggtctataccgcgccatcggggtgatcggcactggaggggtgaaagagctgccaaagcactgcatgacattctgtgtcgttgccttctgcgtgacggtcatcattgacgctgtcgtgctggtctctcagaagaggggttggagcatccacaggtacatccccagcatgacggtgattgcgctgccgtttttcgctggctcctacttcaccatcgatatgtgcgtggggagccttttgctgcttgcctggacaagaatgaatgcaaaaagtgcagagatgctgtcatcggccgttgcggcaggcttgatatgtggagaagggctgttcacactgccatcagcgttgctcaacatgttcaaggtgcaaccaccgatgtgcatgaagttcctatccggtggcgaagaagttgaggcagcggactcattcttgaacaatttgggaacatccagaacatga</cdnaseq>

Protein Sequence

<aaseq>MDAMIGDPMSATSVEAVFEKQPSPEFRELVTPRAMAVAVVLSVV ICFVGMRIQMTAGIVPALNMPASILSFFLLKWLIRLLQSCGFPMLPFTRQENMFLLTC IITCLNLALTSGFATNIIGMTSTVARSLADDPDPRDIMDHVPIGKWIVYLFLVGMTGV LINVPFNQVMIIDYKLLFPTGTVIAQLINSFHTPEGAYVAKFYFDFSATYIGLGMICP HIVNFGLFFGAIISWGFLYPFLETKRGQWYQTDSPTSLNGQNGYKVFISVTLIITDGM INFLTLITTASINFYQLRKEHDLGLANYFKKHPSLNYDDRKRIEVFLANRIPIPVPVA AYITCAAISTIAIPAMFNQIKFYHLAVLYMVIPVVTFCNTYATGLTDWSVAPTYAKFT TFVFAAWIAKPGAVVASLLASGVIVAALHISSQAMQDLKSGHMTLTSPRAMVTGQIFG VAVGSILCPCVFLAFQSTTKPNAPVGSKQSDYPCPFAGLYRAIGVIGTGGVKELPKHC MTFCVVAFCVTVIIDAVVLVSQKRGWSIHRYIPSMTVIALPFFAGSYFTIDMCVGSLL LLAWTRMNAKSAEMLSSAVAAGLICGEGLFTLPSALLNMFKVQPPMCMKFLSGGEEVE AADSFLNNLGTSRT</aaseq>

Gene Sequence

<dnaseqindica>4804..5931#3694..3880#2758..2855#2465..2631#1..337#atggatgcgatgatcggcgatcccatgtcagcgacatcggtggaggcggtgttcgagaagcagccatcgccggaattcagggagctggtgacgccacgggccatggccgtggcggtggtgctcagcgtcgtcatctgcttcgtcggcatgaggatccagatgacggccgggatagtgccggcactcaacatgcctgccagcatcctcagcttcttcctcctcaagtggctcatcaggctgctacagagttgtggctttcccatgctgccattcacacgccaggaaaatatgttcctcctgacttgcatcatcacctgcctcaacctggccctcacaagtaagcatcagcattatatgcctgggtaaatattgcgaaaacatacttctcccacaagtataggaaatactacatgttatatatttagatggaaaagcctacaactgtgctactacttgtgaaagaaaaagaaaaaaaaactagatagactgactcaatcaccagcctcaggtggctctctcccttacagcgtacagctgaaagggcacataaaactagcacctgagcatgcgacctcatacaaatcacctcatcttacaagttatcagtcaactaaactggggaggtgacaaaacagtaggtttctttacagttatccttcaaccagttgtggctttgtgatatgtgaaacaagaacagaaactattttattttctggcagttcaatcaggactattaagtattaactactttaaattctgctagttgagttgcagttttgaaaatctagcttaaaagtattagtgttagccatagtagttcttcagggtgtcaagagttacatggttcatcgaaattatttatcttctgccaggttctcaagcagccatcccaacatgaaaatcttgttgcaaaagccagaaagattaaaaaaacagagttcaaaatatcggataatcaaaacttctctggtctaaggacaacaaaacaaaattttggtcctaaaatattccatgaaactgttctgaatgatgtttgtctaacaaaacttgaatttccaaaaaatgtgcaaattaaaatgcaaccaagaaattttcttttttctccttttaaatgtattgggactttgttctcatcaataatacaattatctatgcatgagtaatgacaagataaattaataaattcctcagaagtacgtgaaatattcttttcttaagaagttatttgaataacctggaggggcaacataaatcaaaactttggaaattactaaaaagcttgataagaaggccagaagataagtgaatctataggtagttagatttaactttccgtaggaaataatgacataaacaaaacgtaaacactattgccaacaaaaataatgaagaacagtaaatatgaagtagatatataatatattatgttttaaacaaaggttccatacataaatgaaccttttacccagttagtagttagtactagtctcactctaaactccacataggagcccagtggaaacaactactaccactatcccaaaataattgtaattctagattgtttagtatatattaagttttgagaaaaaagactatgatacccctcattaaatagtatatagataaaactagaaggatggttgagggtagaatgaaaagtgattggtaggacaattattactctattgtcacaactattttgggacaaatttgaatcctagaaatacaattattatgggacggaggtagtatgaaatttaatctaggcttattatatcagcaagttccagtcataattaaccatctattttgaatatcatgggtgctgccagaaaagacggagaaaatttagaggactattaccatacgatcacactcacgtagttaaaatctccagtagtaactgtatttcctcgattactgccacaggataatttcatgcctctaaaaccaagagaaattttataattaaggtagtaaagagacataaaagatgtgatttgaacttggagatttgtcatatgagatatgaaattgattattgtggttattgtaaatgcatattcacctgggtccatccatttatacagacaataccttttgaaataaaaaatattgatatatcaaaaaacaaaacattcagtagagaaagtagcatacctataaaaccaaacttttggggaagttgtgcgcctaaaaaataggttttggaagggggaggagagattgaattatcaagaattgtttttatcttttgaaaccatttttattaacttcgaattaaatccttccataacttatatttaaaagtaaaccttttggacacaaggtatttaagagcccaaaattggaatacttttttcaaaacaaaatactcaaataatttgtagccagttttttttttttacattttgtatctctttctagtttaactggcctattttcttgttacattttttaggtggttttgcgaccaatatcattggaatgacttctacggtggccagatcacttgctgatgatccagatccaagagatattatggaccatgtaccaatcggaaaatggatagtatacctattccttgttggtatgacgggagtgttaataaatgtgccatttaaccaggtttcttctttcactgattgatcatttttttttaattttagaagtttctacttaacatttctaagattgttttgcattattctcatccttaaacataattcataagttgatttccttatactgcaggtcatgattattgactacaaattactatttccaacaggaacagttatagctcagcttattaatagctttcatacccctgaaggagcttacgtagcaaagtaatgaagtcttgttttcttagtaaaaaattgacagattgaatttcatttaactatattcatgattttgtgcactaatatttgcatgtaatccagaatgcaggttgcgaccattttcaaagtattttttggcagtttttcttggtctatgttccagtggttctatactgcaggcgatgattgtggatttcagcactttccaacatttggactaggattatacaaacacaggtgataaatatattcaattctgctaaagaacgatgttacatgcgttacagttgtgtcctcctcaccttcacagaaagatgacattttatagactatatattaatcaatgtttttgagtatcaacatattatcaatttatcatacacaaaagatctgaatggttatagagaaaactgtgtaaatagtttattacacaattatctcaatagtgtgtatgcaagtcatgtatttctataaaaaaagaattatttgacatatataagtctaagatcgtcatgttcataaaagacatgacactaaatatgaaaatggctaatgacaattagatcatacacgtcctatgaaatggcaacattgaattgatcaatgtgatttatttactataggctagggtagggaataaataactcagtccaaatttcattgatggttcataggaatcttatgcattacggaatcattgaattgatgccatttgtaggaattgagtttgacaatgattagtcaatccatgtacaggtttgaatatattttacaggataagcatatcagtcgaagtgaggtactaacacacacatatatatatatatatatgctgtacctacaggttctactttgatttctctgcgacatatattggtctgggaatgatttgtccacatatagtaaattttggattattttttggggccatcatctcttggggatttctatatcctttccttgaaactaaacgtgggcaatggtatcaaactgacagccctacaagtttgaatggacaaaatggatacaaggtatgtacgaaaaaaattaaaatgaagcatactactgaagggttgtctaaaatttatcagtccttttctgctactaatcaatgcaaagacatatttttcccaccaattattttagctactctactaaaatgcatctgaaggtgtccaagcatgccaacatctcacacccataataaccaattaagttgaacaaaccgtacgatgatacgaacatatgtgtaattgctctttcttttaatatgcaacaacttccactcttctatctgtgagttggttgcaaacctgcaaacaaggggaaaaaagacatgcatgaaaactaggtaattgctataagttggaccaagtatatgtatcttaccaccttactggggttaaaattacacattatcattctaccaatgcaaatttcatggtactgtacattcttgttgttgttgttgatggtatgttatagtaactagtgtcattgcatcaaaaatcaagaatacataaattcaaatgttgttgttgatggtatgttatagtaactagtgttattgcatcaaaaatcaagaatacataaattcaaaagttggcatcattgcagaagaaaggagaaaattcatacatacactttcatgtaatacagatcagggaggtattgcattcattaacaatctgagcacatacttcatatcatatatttcgtttagtatattacacttgactaagaattttgagattccaatcaagcttttcacctttaaatttaatttcaccatgagctgtatctgttgctactaccaaacatgtgcatagtcattgcagcacttttgatgatgtaggctatattgctgtcttgatcaatttgctagctactttttcactagtgagacatactcttctaagcttttttttttctatggatataacttatataacaggtgttcatcagtgtgacactgatcattactgatgggatgataaactttctaacactcatcactacagcatcaattaacttctatcaattaaggaaagagcatgatttagggcttgccaactatttcaagaaacacccaagcctcaactatgatgatcgcaagaggattgaggtgttcttggctaaccggatcccaatccctgtgccagtggcagcctatatcacatgtgcagccatcagcacgattgcaatcccagccatgttcaaccagatcaaattctaccatctggccgtgctttacatggtcatcccagtcgtgaccttctgcaacacctatgcgacagggctcaccgactggtcggtggcaccaacctatgctaagtttaccaccttcgtctttgcagcatggatcgccaagcctggcgctgtcgtggccagcctccttgcgagcggggtgatcgtggcggcactccacatctcgtcgcaagcgatgcaggacctcaagtcgggccacatgacgctaacgtcgccacgcgccatggtcaccggacagatcttcggcgtggccgttggctccatcctctgcccatgcgtcttccttgccttccagtccacaacgaagcccaacgcaccggtgggttcaaagcagtccgattacccatgccctttcgcgggtctataccgcgccatcggggtgatcggcactggaggggtgaaagagctgccaaagcactgcatgacattctgtgtcgttgccttctgcgtgacggtcatcattgacgctgtcgtgctggtctctcagaagaggggttggagcatccacaggtacatccccagcatgacggtgattgcgctgccgtttttcgctggctcctacttcaccatcgatatgtgcgtggggagccttttgctgcttgcctggacaagaatgaatgcaaaaagtgcagagatgctgtcatcggccgttgcggcaggcttgatatgtggagaagggctgttcacactgccatcagcgttgctcaacatgttcaaggtgcaaccaccgatgtgcatgaagttcctatccggtggcgaagaagttgaggcagcggactcattcttgaacaatttgggaacatccagaacatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0251900, RefSeq:Os05g0251900