Os05g0252100

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0252100| Description = Protein of unknown function DUF620 family protein| Version = NM_001061568.1 GI:115462866 GeneID:4338225| Length = 16...")
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Gene Name

Os05g0252100

Description

Protein of unknown function DUF620 family protein

Version

NM_001061568.1 GI:115462866 GeneID:4338225

Length

1688 bp

Definition

Oryza sativa Japonica Group Os05g0252100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:9243632..9245319

Sequence Coding Region

9243632..9244435,9244657..9245319

Expression

GEO Profiles:Os05g0252100

Genome Context

<gbrowseImage1> name=NC_008398:9243632..9245319 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:9243632..9245319 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaaggtgtgccctaaccttgaccgggaggacggcctcgacaccgtgctggaggtgccggtgccggagctccaccgccaggcaccgcggcggcgagggcggcgcggcggcggcggcacggtgaagtcgtgggtgcgggcgaggatggagcacgggcggaggcgcgacggcgcggcgccgtcgcgcgccgaggtgcagctgatgctcggcgtggtcggcgcgccgctggtgccgcaggccgtggaggcgaggaaggccatggtggccgggcggggcgtcgggggggagggggaggagcccctggacctggaggcgtccaaggcgaggtacatcgtcgagcagtacgtcgcggcggccggcggcgaggccgcgctgggcgccgcgacgagcatgtacgcgatggggaaggtgcggatgaggacgacgacgacgagcaaggcgaacaagggcaaggtgatgggcgtggccgccggcggcgaggtggccggcgggttcgtggtgtggcagaagaagccggatctgtggtgcgtggagatggtcgtcgccggtggcgtcaagatgagcgccggcagcgacggcaaggtcgcatggcgccagacgccatggcaggaagcccacgcctcccgtggcccgccacggccgctccgccgatgtattcagggcttggacccgaagtcgacggccgacctgttctcgagcgcggcgtgggtgggcgagaggtgcgtcgacggcgacgactgcttcgtgctccgcgtcgacgccgaccacgccgcgctgcgcgcccggagcagcggcgacgtcgaggtggtccggcacgccgtgctcggctacttcagccagaggacggggctgctcgtccgcctcgaggacagccacctgctgcgcatcggcctcgcccacgccgccgccgagagcgcctactgggagaccaccatggagtcctccatcggcgactaccgcgccgtcgacggcatcaacatcgcgcacgccggccgcaccgccgtgtcgctgtcccggttcgagagcgccgacgacgccgccgccgccgcgcgcggtagtaataagcggtcgtggggcaccaccaccatggaggagacgtggagcatcgaggaggtggacttcaacgtcgtggggctctccatggattgcttcctgcctccccgggacctagtgctcaacgactgcagcaagcagcagcagaaagaggacgccgccgccgccgtcgtcgtcaaggacgccgccgccgccgtcgacgtcaaggacgccgccggtgccgccgcgaacgccaagggcggtagtgacgacggcaagaccaacggcggtgacgtcggccgcggcgtggtggtgaagaaggcgcttgttccggcggtgaccggactgggttggttcggtccggccaaggtggttgccgtcgacgacacggtggacgacggcgtcgccgccgcagccgacgacgacaagtaa</cdnaseq>

Protein Sequence

<aaseq>MRKVCPNLDREDGLDTVLEVPVPELHRQAPRRRGRRGGGGTVKS WVRARMEHGRRRDGAAPSRAEVQLMLGVVGAPLVPQAVEARKAMVAGRGVGGEGEEPL DLEASKARYIVEQYVAAAGGEAALGAATSMYAMGKVRMRTTTTSKANKGKVMGVAAGG EVAGGFVVWQKKPDLWCVEMVVAGGVKMSAGSDGKVAWRQTPWQEAHASRGPPRPLRR CIQGLDPKSTADLFSSAAWVGERCVDGDDCFVLRVDADHAALRARSSGDVEVVRHAVL GYFSQRTGLLVRLEDSHLLRIGLAHAAAESAYWETTMESSIGDYRAVDGINIAHAGRT AVSLSRFESADDAAAAARGSNKRSWGTTTMEETWSIEEVDFNVVGLSMDCFLPPRDLV LNDCSKQQQKEDAAAAVVVKDAAAAVDVKDAAGAAANAKGGSDDGKTNGGDVGRGVVV KKALVPAVTGLGWFGPAKVVAVDDTVDDGVAAAADDDK</aaseq>

Gene Sequence

<dnaseqindica>885..1688#1..663#atgaggaaggtgtgccctaaccttgaccgggaggacggcctcgacaccgtgctggaggtgccggtgccggagctccaccgccaggcaccgcggcggcgagggcggcgcggcggcggcggcacggtgaagtcgtgggtgcgggcgaggatggagcacgggcggaggcgcgacggcgcggcgccgtcgcgcgccgaggtgcagctgatgctcggcgtggtcggcgcgccgctggtgccgcaggccgtggaggcgaggaaggccatggtggccgggcggggcgtcgggggggagggggaggagcccctggacctggaggcgtccaaggcgaggtacatcgtcgagcagtacgtcgcggcggccggcggcgaggccgcgctgggcgccgcgacgagcatgtacgcgatggggaaggtgcggatgaggacgacgacgacgagcaaggcgaacaagggcaaggtgatgggcgtggccgccggcggcgaggtggccggcgggttcgtggtgtggcagaagaagccggatctgtggtgcgtggagatggtcgtcgccggtggcgtcaagatgagcgccggcagcgacggcaaggtcgcatggcgccagacgccatggcaggaagcccacgcctcccgtggcccgccacggccgctccgccgatgtattcaggtactgaactgttctttcgtctctgcgtttttacccaaaagaaaatcaaatttgactaaaacttgtaataattgagcaaatcacaattgcatgcaagaacatggtgtaccgtacccggacaatccggccggacgaacgtgctcccatgtgcttgtaaatgtatgattatttaattttgatttaattactgtattaatcaattttgattatgtgtgatgcagggcttggacccgaagtcgacggccgacctgttctcgagcgcggcgtgggtgggcgagaggtgcgtcgacggcgacgactgcttcgtgctccgcgtcgacgccgaccacgccgcgctgcgcgcccggagcagcggcgacgtcgaggtggtccggcacgccgtgctcggctacttcagccagaggacggggctgctcgtccgcctcgaggacagccacctgctgcgcatcggcctcgcccacgccgccgccgagagcgcctactgggagaccaccatggagtcctccatcggcgactaccgcgccgtcgacggcatcaacatcgcgcacgccggccgcaccgccgtgtcgctgtcccggttcgagagcgccgacgacgccgccgccgccgcgcgcggtagtaataagcggtcgtggggcaccaccaccatggaggagacgtggagcatcgaggaggtggacttcaacgtcgtggggctctccatggattgcttcctgcctccccgggacctagtgctcaacgactgcagcaagcagcagcagaaagaggacgccgccgccgccgtcgtcgtcaaggacgccgccgccgccgtcgacgtcaaggacgccgccggtgccgccgcgaacgccaagggcggtagtgacgacggcaagaccaacggcggtgacgtcggccgcggcgtggtggtgaagaaggcgcttgttccggcggtgaccggactgggttggttcggtccggccaaggtggttgccgtcgacgacacggtggacgacggcgtcgccgccgcagccgacgacgacaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0252100, RefSeq:Os05g0252100