Os05g0255600

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0255600| Description = Thioredoxin domain 2 containing protein| Version = NM_001061570.1 GI:115462870 GeneID:4338227| Length = 3753 bp| De...")
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Gene Name

Os05g0255600

Description

Thioredoxin domain 2 containing protein

Version

NM_001061570.1 GI:115462870 GeneID:4338227

Length

3753 bp

Definition

Oryza sativa Japonica Group Os05g0255600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:9443437..9447189

Sequence Coding Region

9443705..9443788,9445637..9445711,9445815..9445862,9445938..9446080,9446174..9446246
,9446330..9446391,9446534..9446631,9446706..9446815

Expression

GEO Profiles:Os05g0255600

Genome Context

<gbrowseImage1> name=NC_008398:9443437..9447189 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:9443437..9447189 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcccgacgcggtgaagtcgacgctctccaacctggccttcggcaacgtcatggccgccgccgcccgcgactaccagaaggaaattgtagctaaagagaaagcccaagcagcaagtgcaagccatgatgaagttgatcttgacgaattattggatgacccagagcttgagaagttgcatgcggagagaattgctgctctcaagaaagaggtcgagaagcgtgaagtgctaaaaaggcaaggtcatggtgaatatagggagataactgaaggggacttcctaggagaggtcactggcagtgaaaaagtcatctgccatttctaccaccgtgaattttaccgttgcaagatcatggataagcatttgaaggcccttgcaccaatctatttgggaactaaattcatcaagcttgatgctgaaaatgctccgttctttgtcacgaaactgggaatcaaaacattgccctgtgtgatactgttcaagaagggcattgctgctgatcggttaattgggtttcaagacctcggcagcaaagatgatttttcaacaagagcattggaaaatatactcaagatgaaaggtataattgacgaaaagaagaaggatgaggatgatgaagatgatgaaacctatatgtcaatgaacaggagggtcagatcttcaaccgctcaagattctgattctgattga</cdnaseq>

Protein Sequence

<aaseq>MDPDAVKSTLSNLAFGNVMAAAARDYQKEIVAKEKAQAASASHD EVDLDELLDDPELEKLHAERIAALKKEVEKREVLKRQGHGEYREITEGDFLGEVTGSE KVICHFYHREFYRCKIMDKHLKALAPIYLGTKFIKLDAENAPFFVTKLGIKTLPCVIL FKKGIAADRLIGFQDLGSKDDFSTRALENILKMKGIIDEKKKDEDDEDDETYMSMNRR VRSSTAQDSDSD</aaseq>

Gene Sequence

<dnaseqindica>269..352#2201..2275#2379..2426#2502..2644#2738..2810#2894..2955#3098..3195#3270..3379#gacggcacagcacaatcgtgcgaggctcgcctaaaaaaaaaaggaaagaaaaaagaaaaccgtgcggcgccgctcgtccgcccgccgctagcgccgacgtcacctctctcggccactggtgctccggtgcgagctgctctgcgcggcgccgccacctgaatcggatcggaggggaggagatctcggccgagcagaagcggcggcggcggtgctcgcggaggagggagtagcagcagcagcagcatcgcaaagagggggaggaacagccatggatcccgacgcggtgaagtcgacgctctccaacctggccttcggcaacgtcatggccgccgccgcccgcgactaccagaaggtgactcactcactcccccccttcttctcccgacgctcgttcacctaggtctcgcgtgccactttatctcgcggggatcagatcagatcactgttcttgattgggagtgagttatagtctagtactctggcggttgattcggccgcggagcacttggctcggctgcgctgcgggcatgggttgtggaaggtggtctttggttgggatcatgaggaggtttagttcataaggggggatggattatctccagtcatgtattccaggacaactagtagagtgatgtagtagggtctagagactactgtgttccgttctgaattggtgatgataattctttatcatttatcaaaggttgcttcttctcaaatttagccaataaacgtggctcagttgaagatattatttcaatttagaataatcaaatttggaggggatcatgatccatctggccgttcttttatatattgaaaatggtttaccttctgttgccttctgaatgcatgtcatgtaaattttgtaggcagtccttttaatatcaaaatcgtctttctgtagttttacagcaaaaaagtgtggggtttgcatcatagtgtagagaaaaagatataactgtccttcatgcacataacttgtttcttttatccttttatctgtacttgatttttcacaacttgtaatgagattggcaagttattatcttctatcattttcattttatgtccttgttgtaatttttcttttttttaagaaggggttggggggtggggggggggtgtaaaaactgatctggcaggttggctggtggtggtggagctggtgtgctcctagatccctgcatctcagaaccaggcgattaaatctcaattttaaattggaagtgagttgtagtccggtacacctatcgttggaactggcagctgattcacctcggctcagctgtgctgcgggcatggattgttgaaggtagaaccatatagcaatgtggaggatgatcctggtaatacagcactacagcagtgtgatttttcgtcttgggaaagggcaggcgcattaggtttgagcctttggctatgggagtgatgttggttcatgcgaaaaatcttgcctagtagcatgatccaatctttggttgggaacattgggattgggatcatagttcattaggaggatggattagctccagtcctgtattctaggacaggaaatagagtgatggtgcagggtctagactctatagagaccagtttattccatgctggttaggaggtaatgctttatgacacctcagagtacacaaaaacaagggcttctcccatttagcctgtaaatgtggttagcttggggtatagcttgcaagtttacaataatcaaagctgcagtggatcatgctccatctgcgcgttcttatgtattttggtaatgggttaacttctgatgcattttgctcttacatgaatgcatgttgtgtaaagtttatcggtattctttttttatatcaaaatgagctttctgtatattgacagcaacaaactgttgaagtttacatcgaaagtatagaacaaaaagatgtaactgtccttcatgcacatcacttgttttttttttatttatacttgattctttactccttgtaatgtgattgggcaagttcttatcttctcttattctttgtgtcattttcactcatttccttgttatagtgggggtgaaagtatttttaccctcatgttccgatgctgtgaacctcttgcatctttttaaacaaatttgcttacagaacagggtaatactattctctctgcccccttgtgattttgtttctgcatactgacatagtaatcatgttaggaaattgtagctaaagagaaagcccaagcagcaagtgcaagccatgatgaagttgatcttgacgaattattggatgtgagttgaactatagtatcttttatatttctcttgtttttttttctttagtttgaagcactgaatacctttttatctatcatgctgtggaactacactataggacccagagcttgagaagttgcatgcggagagaattgctgctctcaaggtagtatctgcatattgccctcatgaagcttgtgaactcttcactttaagttattcatttgcctgtgcataacagaaagaggtcgagaagcgtgaagtgctaaaaaggcaaggtcatggtgaatatagggagataactgaaggggacttcctaggagaggtcactggcagtgaaaaagtcatctgccatttctaccaccgtgaattttaccgttgcaagtaggacataagttgttctttaaaaaacaatacaaaatgttttatgattgaccctgatgataattcatggacacctatctaaatgtttcctaggatcatggataagcatttgaaggcccttgcaccaatctatttgggaactaaattcatcaagcttgatgctgaagttagaatgcgatctctattagcattcagttaattgtattttataacaaagatgctgtctaatcttgtaaataactaatccagaatgctccgttctttgtcacgaaactgggaatcaaaacattgccctgtgtgatactgttcaagtaagtgcataaactttcatcatttctacccatggatttttatcacatgtgctcaactgtttggtgcttaacttttttgaggaccaacccaagagtcagacactttctgtttttgctgtccaactgacattttgttatttaggaagggcattgctgctgatcggttaattgggtttcaagacctcggcagcaaagatgatttttcaacaagagcattggaaaatatactcaagatgaaaggtatatctattacgtcttcacaattacttcaaaaattgaaatagtaacaaatatgataacatacaacaatataggtataattgacgaaaagaagaaggatgaggatgatgaagatgatgaaacctatatgtcaatgaacaggagggtcagatcttcaaccgctcaagattctgattctgattgagtatgaagtgttccactcccctgtaacatcaagtttcttttgtactctagttctcaaaatatctctgtgtttgtgtaatatgtattccgaatattatcaacctggttaggaaatgagtgacttgaaaatgtactgcctagttagctgcatttcattcatactggcaagtaggcgtatgtgttatcagttggtatgctttacccataacagtatctacaaaggagtttctactagctcctacgttggtcatcatgctgccaaattactggagtaaactagtgtttcagctagaatgcttgattggtgactagtaccatctgtaaccaattcactgtgaaccattacagttgcagttgatcaattggatttagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0255600, RefSeq:Os05g0255600