Os05g0376175

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os05g0376175

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001187465.1 GI:297724060 GeneID:9267674

Length

2583 bp

Definition

Oryza sativa Japonica Group Os05g0376175, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18161900..18164482

Sequence Coding Region

18161900..18161923,18162046..18162122,18162869..18162923,18164041..18164086,18164164..18164252
,18164369..18164482

Expression

GEO Profiles:Os05g0376175

Genome Context

<gbrowseImage1> name=NC_008398:18161900..18164482 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18161900..18164482 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttatttggttgtctcctcttattaccttcataaactcttcccagaaagttgttaaggatgagcatattctaggaaaccgaactctggaagtgaagatagcgactcccaaggaagaaatgcgagctccaggaatcaagaaagctactaggatatttgttgctcggattcctcaatctgtggatgaatcaaagtttcgcaggcattttgaagcttttggagaaattatagacctttatatgccaaaggaactgcgttcaaaaagccatcgcggaatcggatttatcactttccggagtgcagaatgtgtggacaatatcatgcaagaaacacatgagcttgatggtacaactgtagctgttgaccgtgcaactccaaagaaactcaatggttactctcattaa</cdnaseq>

Protein Sequence

<aaseq>MVIWLSPLITFINSSQKVVKDEHILGNRTLEVKIATPKEEMRAP GIKKATRIFVARIPQSVDESKFRRHFEAFGEIIDLYMPKELRSKSHRGIGFITFRSAE CVDNIMQETHELDGTTVAVDRATPKKLNGYSH</aaseq>

Gene Sequence

<dnaseqindica>2560..2583#2361..2437#1560..1614#397..442#231..319#1..114#atggttatttggttgtctcctcttattaccttcataaactcttcccagaaagttgttaaggatgagcatattctaggaaaccgaactctggaagtgaagatagcgactcccaaggtaaactacggagataagtatctttgatcgtaggtgcatcaattcttcagtagttcagtttcagattgatcatgtcttctttttcttgttagtaatgtgacaagttcttaacacaggaagaaatgcgagctccaggaatcaagaaagctactaggatatttgttgctcggattcctcaatctgtggatgaatcaaagtttcgcaggtgagatttaatctatatatctagcaggacatcaattaatatttggatttggctaagctataatggtttctgaacaggcattttgaagcttttggagaaattatagacctttatatgccaaaggtgagagagctaaactgattttatatattttgtagagatataatatcctatatctaagttctgtcctctaattttgatttaatcttttcactcaaatactgataatgcaaacataaagcacaatagaaattcattttctaaatgacatcattttgttcagttattctggaactccatttgatatgccagcaaatttcttttccccatgttaatactctattcacaaatacttgtcacttctaactaacatgcattctagatcatgttcctctcaataaggagatcaataaacatttgtttttatggttttatgggatcagttttttggaaacatacaatgacctatgtatctagtgtgaagtactgaaagcaaacaatctcttctcttcttttaacttaatcttcagtgacatcaattagaagttagaacgttgttgcttgattgcttgtactctttcttgaagccttaaaaaattaagcactaagaaagattgtagtaaatgtgtaatggctttaaggtaatcattggaaaggaaacgaattttggaaattgctgcacttaaagaatactctctccattccaaaatataaggatttctaggttgtttagcaaatactaaggttaggtcaaaagattcatttttagtcacttcagttgtcaatttttgaagtttgaattgcttagatcccctttccaagcatttgattggttgtataatcattgaaatggtagaaatcatgggaatcagtgcaggaatccttatattgtggtacaaaatttgaatcctagaaatccttatattttggaacggaggagtaaatacttggaaaaactgtgagctcatacagcccatggagggatagcctggccaaccgtgcctgcattataccagttataattgggaagataggtgaaatcggacctgcacatgctcaacttctgatctagtccttgtagttgcagatgcaactatcagaagttccattgtttgtgccagccatatgtttgctgcaacaaagtcaatccaaaattccaaattctcctggagagggttgagcctttgagatgattaacctctactaatttggacagtgttttctttcctatctcatgtaggaactgcgttcaaaaagccatcgcggaatcggatttatcactttccggagtgcaggtatgtgtaatccttgagtgtgcataaataatccttgaatactcatttaggtgcaatatttgattaatccattgatcctgtgagaacaaactaattagtgttggaaatgatatagcttatgtcctccgattcaaggagcaaaattctctcacattcagaccactggcatgataatggtggtgtttttggtgctggtagcgatgccagtgttgcacaccaatgtgctacatgttatcactaatcccataggtttagacccatgcttagggatggcagtaacgtgcagtggtgggtggcaaggctgtgcttgtgctgccaactgcaggtggaatgtttagttcttatcaatgtcggcatgtggcatgcccaatgaaattggcagccaaaacatcaactctcctgatctgctacccaaaattgttgttgtaaaggccatctggttttggctctagaattttggcatcgaatctacagatcaattcttatatattttgttctggggcttagtgtctacgttttttttttttggtctttctgctccctttttttttcataactctcttcatattcatgccaattctgaaataatttactttttcttggaactttgattttggttttttatttgaattcctatagtatgcttgcaactttcatttaccactacatttttggagaatgttcctcaactatattttcagcttcaatccatgtatactttcctaactttgagctgtaatttatagaatgtgtggacaatatcatgcaagaaacacatgagcttgatggtacaactgtagctgttgaccgtgcaactccaaaggtgcatttacctaatcgcttatctcatctttgatatatatagttatcttctaccaggttgtatctaatactcatcctttatttaattataattcagtggatgccctatgtatttattgttagaaactcaatggttactctcattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0376175, RefSeq:Os05g0376175