Os05g0269100

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0269100| Description = Cyclin-like F-box domain containing protein| Version = NM_001061588.1 GI:115462906 GeneID:4338253| Length = 3021 bp|...")
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Gene Name

Os05g0269100

Description

Cyclin-like F-box domain containing protein

Version

NM_001061588.1 GI:115462906 GeneID:4338253

Length

3021 bp

Definition

Oryza sativa Japonica Group Os05g0269100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10815213..10818233

Sequence Coding Region

10815443..10815543,10815642..10816836

Expression

GEO Profiles:Os05g0269100

Genome Context

<gbrowseImage1> name=NC_008398:10815213..10818233 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:10815213..10818233 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaactccactccctgtcagtgctggtgatgcttcacgagtcctcttcactggcattcgagaccacactgacatcctcatcgaggtcctccttcggctgccaccctggtccctctgccaactacgctgtgtatgcaaactatggctagagcggacaacatcgtccaccttcctctctgcctatgctgaacgtcataccaccaacccttcaaactggttcctcctggaccgaacaatctttattgacactgcccccacaccccgaggcccaatacgtgcactgcttcgcaattctgaaccaccaaaagtctcatcaatcatcacctcctctcgcatgtgttccattcaccggaaagagtccttctatgaccagctacccatggttgtcagctacagtggtggcctcatcctgctcactggcaatgaaaataactactatgtctgcaacccattcactggagatactttccttctaccagttccgaagccccaactccgcaatgctgaaagcttgggcattgttgctcgggatggtgagtatgtggttgctgaactcatgatgtcctgtctacgttccttctcatcagtaaatggccgttgggaggagaagcctctcgtatgccctcaattctccaggggtgacatggtattctcctctggtgggatgcttcattgggttgatctcaactgtggcatactctcctgtgacccatttgcatcagaaccaactgtactttttatcaacctgccagaggccagtggaagacccacccgtggcctggatgaatggatccacatgaggtatgttggtgtctctgctgggcggttgtgcttctttgacattgatgaggatgatggagaatctgggtcaatgagcttgtgggcactaggtgggaacagtggtgagtgggtgttggaatacaaagtggatttcgaagatctgtgggaagatgaaagctatgatgattattcgctggatgaggatgaggttccattagttggcttggttgacccattgaatgagcacagtgtgtacgtgatttctcaggactgcctcttcaacatcgatctgaagacaaagcaaattcttaattgtacagcacagactaatgctgggagggaggttggatcttctcctccaattgcttgcgtggtgccccctttaccgcacttggtgtctccctatccgtcatgtttaaggaaagaagcaagcaacagtgatcctcaggaggcaggaagcagtgacaagccccaaaagtctgggaagggcaggagaaggaaatcgaagacgtga</cdnaseq>

Protein Sequence

<aaseq>MTTPLPVSAGDASRVLFTGIRDHTDILIEVLLRLPPWSLCQLRC VCKLWLERTTSSTFLSAYAERHTTNPSNWFLLDRTIFIDTAPTPRGPIRALLRNSEPP KVSSIITSSRMCSIHRKESFYDQLPMVVSYSGGLILLTGNENNYYVCNPFTGDTFLLP VPKPQLRNAESLGIVARDGEYVVAELMMSCLRSFSSVNGRWEEKPLVCPQFSRGDMVF SSGGMLHWVDLNCGILSCDPFASEPTVLFINLPEASGRPTRGLDEWIHMRYVGVSAGR LCFFDIDEDDGESGSMSLWALGGNSGEWVLEYKVDFEDLWEDESYDDYSLDEDEVPLV GLVDPLNEHSVYVISQDCLFNIDLKTKQILNCTAQTNAGREVGSSPPIACVVPPLPHL VSPYPSCLRKEASNSDPQEAGSSDKPQKSGKGRRRKSKT</aaseq>

Gene Sequence

<dnaseqindica>2691..2791#1398..2592#actccatcatcccccgacgcccccgcatcgccgcttcaccccgacaccccgcgcgacctagtgcgcaacggagggggaagcggtcgtcgtcgtcgtcagcggcggcggctgcggtgcaccggcgggaaacaggtggcggcgcaccggtttcccctttctgtatcgcccccccctcctttctccttccccatccctacgagcaaacgccgccggcacacggggactgagggaggcggctgcgggcgagcaaggagacgcaccggcggctgagggcgtcggcacacgtcgtcgcgcaaggtagctgacgactccgcacgaagaccccaagcgacagcacacggtatccccgctcccctccccaaaaccctaaaattccacccccacctcttcccttcaaatttgcatgatttcagtgtgattcattgaatatttctgttgattagttgctattatgcaatgctcaaacgtgaaatgatcagatctggaaacctgtcctttatgtgtgtgaaatatcagacctgagaagtagagaccaattatctagtatcccttttcctgtttagtgatgtacagactagtgtgcattgaacctttatctgaaattttcaaactatggttttattaaacaaacaagcagccgttcagatagaatattgccaattctattgtcagccaactgcacgttcagataaattcagaagaatttctattgttgtagacctgaatacactgattgacagatacaatcatacaagcgctagtagttgtatcctgttctgttctgaatttgcactgacactgatcatgtggagaatcaagcgatggaatatggagaattaagctgattggaatgactacaacactagcagatcatagaatatgattcccatgtttggacaattaaaattgtcaagatatcacataactgaactaggacttactagtattgcccttcacttcatgtgcatctaggccttctgattccattatattttttctttcttgtttggctggttttctatcagttccactgcctctcattaattgaatgggaaatattccgacatatgtatttttgtgtgttgatttgttgaaagagattacttggataagttttttggtagtgatcttgtgaattctgattattgcgatttccttttgctctgactgagagattagtgttatatcacgttgttacaagctatgtaactatgttgctaccatgatgattcttttaccagtttgtttatatttgagctgatatgcatacattactacttgtgtcattgttgcttttcttcttcaaagcttaatttaaattgtggaattaagattgataactgactctaattcaccttttgatgcaacagaattggtgtaagcagaaacagtccacaatgacaactccactccctgtcagtgctggtgatgcttcacgagtcctcttcactggcattcgagaccacactgacatcctcatcgaggtcctccttcggctgccaccctggtccctctgccaactacgctgtgtatgcaaactatggctagagcggacaacatcgtccaccttcctctctgcctatgctgaacgtcataccaccaacccttcaaactggttcctcctggaccgaacaatctttattgacactgcccccacaccccgaggcccaatacgtgcactgcttcgcaattctgaaccaccaaaagtctcatcaatcatcacctcctctcgcatgtgttccattcaccggaaagagtccttctatgaccagctacccatggttgtcagctacagtggtggcctcatcctgctcactggcaatgaaaataactactatgtctgcaacccattcactggagatactttccttctaccagttccgaagccccaactccgcaatgctgaaagcttgggcattgttgctcgggatggtgagtatgtggttgctgaactcatgatgtcctgtctacgttccttctcatcagtaaatggccgttgggaggagaagcctctcgtatgccctcaattctccaggggtgacatggtattctcctctggtgggatgcttcattgggttgatctcaactgtggcatactctcctgtgacccatttgcatcagaaccaactgtactttttatcaacctgccagaggccagtggaagacccacccgtggcctggatgaatggatccacatgaggtatgttggtgtctctgctgggcggttgtgcttctttgacattgatgaggatgatggagaatctgggtcaatgagcttgtgggcactaggtgggaacagtggtgagtgggtgttggaatacaaagtggatttcgaagatctgtgggaagatgaaagctatgatgattattcgctggatgaggatgaggttccattagttggcttggttgacccattgaatgagcacagtgtgtacgtgatttctcaggactgcctcttcaacatcgatctgaagacaaagcaaattcttaattgtacagcacagactaatgctgggagggaggttggatcttctcctccaattgcttgcgtggtgccccctttaccgcacttggtgtctccctatccgtcatgtaatagctctctcttgattttgttaatctgcttgaaggatttgctcttttatatatataaaaaaacatggtaacatttctagcatatatttgaacaggtttaaggaaagaagcaagcaacagtgatcctcaggaggcaggaagcagtgacaagccccaaaagtctgggaagggcaggagaaggaaatcgaagacgtgataaaatgaaaattgagttcatgtcatcggttttatcattgatgagttgaaaagtatctctactgatcatgtgcggtcctaatctcttttaaatctcatatgcagtgtgttgcagctctgttgcatttccttatcagttcagctaaacttatgtatcgtttgaaccttttagcgtcatatgtatcgtttgaacacctctttgttgaacgaaatgaagactaaatttgacct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0269100, RefSeq:Os05g0269100