Os05g0397300

From RiceWiki
Revision as of 20:09, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0397300

Description

Conserved hypothetical protein

Version

NM_001062002.1 GI:115463734 GeneID:4338706

Length

4015 bp

Definition

Oryza sativa Japonica Group Os05g0397300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19334283..19338297

Sequence Coding Region

19334785..19335090,19338003..19338140

Expression

GEO Profiles:Os05g0397300

Genome Context

<gbrowseImage1> name=NC_008398:19334283..19338297 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19334283..19338297 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggagatgatggaggacgacgtgttcttcgccgagctcagcaagcggatatcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgcctccgccgccgcgcccatcccgggattctcgctcgcccatgtgccgatgggcgcgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagctataacaacggcggcggcatgatcggcgccggcgacaacgccgccgtcagggcgtggcagcagcagcagcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccgggatccgttcaccccaagaaaaagggcaagagcaagggcaacgtgcacaaggcggtacggggccaagcggcgccggcgaagaaacaatcctctcaaaaatga</cdnaseq>

Protein Sequence

<aaseq>MEVEMMEDDVFFAELSKRISLLITDDDEAADFGAARFPASAAAP IPGFSLAHVPMGASMVAPPAYTLYHHAASYNNGGGMIGAGDNAAVRAWQQQQQQLCGS KGTGVFIPRSSPGSVHPKKKGKSKGNVHKAVRGQAAPAKKQSSQK</aaseq>

Gene Sequence

<dnaseqindica>3208..3513#158..295#ataggcaaaggccaaggcaaacgcaacgcctcctcctctgcttcttcctctgctgctactgctagtgctaatcccttcctagttcctgctgctcgtgctcaagctcaagctccggtctccaacctcgaggtcaatcgcagcaggagaggagaaaaggatggaggtggagatgatggaggacgacgtgttcttcgccgagctcagcaagcggatatcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgcctccgccgccgcgcccatcccggtgagcctccgttgttttttcttgtattcctcttctgccgcgtcgtcatcatatcatatcattcatcaagcatgcgtgtgcacgcgtgcatgtgagctagctagtagcgttagctcgtttcggttgggggcgttgggttcttcttgcggcttctctcgccttctcgcggctgttggtttggtagttgcagcgcctccacgcacgtggttgcccttgcacacaaccaaaccgaaccaaattgcataaccaatctttaattattctttttttttccttcgaaacaccgatcaagcctttgttcttcgccccccaatagattgacgaaatttcaaaaatatgtatatatatattcaagaacaggagtggccaacttatgaacaggtgcttttgctcttcgcgtagctggctaagcgtcagctggtttcattaaactcggcttcctaccgcgccatgtgcgcaggtgctacgtgctgtctgctgttgccgtgctgtgttgttggttaggacttagctgcacggcacactttcgctggctgctaattatgatcgacggtatagctagctactccgtagctactatacatgacaccgttgcacggttgcatgtgcatatgcgtgtgctttgagctaccactactgctcatgagtcataagtgtgcatatgtgcacttatgagctatatactacgatattcgttcgttcacttgtgtatgtacgtcagtgtgagcctgtagtgtaagtaagaggagtaacaaacacctttcgtaggaaattgaccatttacatattgtgttgctgttgccaaattctccttgggccccacagacgcaagcaaagaatcatcatcagtcgataagccttgaatctaaagtgccttttagcatttcgttttggaggaatcgtacgatattatgttttgtgaaattcatgttaagttgtcagcaaaccctgagtactaggacagatagatagcacggaaatggttgtttttttagtggttattgtttttatattaagtgccatttcccagcgagatagagcacaatgggccaactaaaatctgctctaatccaaatcgttagccgctggaagggccccatgatgtgcacgggtgttatgcagagccacagccatgtctctttcactggccattcttgaactagaaacttgcaagaaacgtcttcccattgcccgtggctgcagacgatccgcgtcgctacatgtcacattagttaggtgtttaattaactagtatagcgagtaatagctaacttaacagcttattaattagctccaaacctccagttaagcccccactaatcgctgcttaactaattgttatcttgtcatatcctctgctgcacggtgcgtaattggtagctccaaaaaatccagttaagcaatgcatacggagatggtcggtcggcactctcctcgcacgcattgatagccaaaagaattttagttgtttttaggcctgcacgcgatgcgacaagcgctcgatcgatcgatgttgcttggtgctccaagcttctaagagcacccgcaatggtaaattaaggtgttctctataaatcatgtacatatcaggaatagactagattaatagtaaaccacctcaatagtatgtctacatgggtatttatagctctctcatgcattgcctcgtttttctctatagactatctctaaaagctagtagatagctttgctctctctcttcatttaatatcttccaagtaggaaaatatgctgatatagatctcttatagataaccattgtgggtgccctaagagcaaggataatagtatagctcatttattactattagctcatcttaaagccaacatatataatagattagctataaggttggctatattgttcttctcttctctctatctctcacttatgcatttaatgtatttgtcttagagcttgtaataagctagctcctgtatgagagcccacacctttgatttttcgctctctctttcctctacctaagtttatagtaggcttataactaactattatacttgctctaatccaatcgacgttgcttgcacacgacacctcatcatgcgacccgtactgcatgtctcttttgctaaaataattactcgtacatttacatataaggccagtcacaatgggggtttcactggtgtgtcatgcacatttaataggggtaagactgaataaaaaatgattatttgcatgaaatggggatgagagagaaggaaagagtttcatcctggtgaaactcgtcagcgtcgtttccaagtcctcggtaacagagtgaaacccccgttgaggccgattcgtttcattcaccggatctcttgcgtccgcctccgccgtgcgacctccgcattctcccgcgccgcgccggattttgggtacaaatgatcccagcaacttgtatcaattaaatgctttgcttagtcttggaaacgtcaaagtgaaacccctccactgtggggattgtttcataaaagatttcatttgagagaagatggtataatattttgggtagccgtgcaatgacactagccattgtgactggcctaactgcatgcatgatgctggtttaataatcccatctcatgctccgtgacaagatcccggggtgctcaccaaatctttgcatgcacgcaagttgccatgagctgctcctactagctagttgctgttgttgttgatgttgttcctacagctagctattggccactggatttttagtttatacaggaataaatatagataaagtgtttttttttcttcttcttctccgccatgatcgcatcacatcaatcgcatcgaccatatgcatgtgcgcccctacatcgcagcaacgcctcgacactaacagctagcccatttggttggaatcacacaaaaacaacagggattctcgctcgcccatgtgccgatgggcgcgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagctataacaacggcggcggcatgatcggcgccggcgacaacgccgccgtcagggcgtggcagcagcagcagcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccgggatccgttcaccccaagaaaaagggcaagagcaagggcaacgtgcacaaggcggtacggggccaagcggcgccggcgaagaaacaatcctctcaaaaatgaagaaaaaaaagaaagagaaaaaaaacaggcacaactaactccaattgcagtgctgaattgtcagtggaattaattaaattaattatgtactatacataaatatgtatatatatatatacatatatatatatatatatacatatatatatacatatatatacatatatatatatacatatatatacatatatatatatatatatatatatatgcgctaaataaccagttgctcccacggccaacgtgtgatgggagcaacgggggcaccaccacgccaccagcaagttactgctagggttgctgtatgtgtataatatagtaagctggtgtccgtaaagtggtgccatggttttctttttctttctctctctccttggcttttaataattcaattaattatttattattttttgtatttcttttctttctatctcaacacttttgtaagatggaatatatagattggtgtagtagtactactgtactagtactaattataagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0397300, RefSeq:Os05g0397300