Os05g0400400

From RiceWiki
Revision as of 20:09, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0400400

Description

Similar to Ubiquinol-cytochrome c reductase complex 8.0 kDa protein (EC 1.10.2.2)

Version

NM_001062015.1 GI:115463760 GeneID:4338723

Length

3247 bp

Definition

Oryza sativa Japonica Group Os05g0400400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19481899..19485145

Sequence Coding Region

19482182..19482229,19484801..19484848,19484965..19485057

Expression

GEO Profiles:Os05g0400400

Genome Context

<gbrowseImage1> name=NC_008398:19481899..19485145 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19481899..19485145 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcctatgggacgcgctctaccgcgtggtgatgcgccgcaacgcggtctacgtcaccttcgtcgtcgccggagccttcgccggcgagcgggcggtggactacggggtgcacaaggtctgggagatgaacaacatcgggaaaaggtacgaagatatatcagtgctggggcaaaggccggccgagtag</cdnaseq>

Protein Sequence

<aaseq>MGLWDALYRVVMRRNAVYVTFVVAGAFAGERAVDYGVHKVWEMN NIGKRYEDISVLGQRPAE</aaseq>

Gene Sequence

<dnaseqindica>2917..2964#298..345#89..181#ctcgctttgcccccaacgaatccctcccccataccaaactccgccgccgccgccgccgcccgccgccgccgagaccgacccgaccacgatgggcctatgggacgcgctctaccgcgtggtgatgcgccgcaacgcggtctacgtcaccttcgtcgtcgccggagccttcgccggcgagcgggtacgcccaccctctaccccccccttttttttttcttttccctcagatctgtccgggcggcctcgtcgccgtttgacccgatctcatgttgttgcgctctcttggtctcgtcgcaggcggtggactacggggtgcacaaggtctgggagatgaacaacatcggggtaatttttttccccttcactctctatgaatgctttcctatttctaggtttgtttgtcgcgtgtttttggatcgtggcgttctagatcttgcatttgcgatctgggtagggctatatcgacgctgtccttgaaattctgttctccttcatgatgggaatgatccgttgcggaggtgcggataatcttttggtgatggttgtacgtgtgcaaaatgaggaggaagagccatgcgaagagaaggcttggttgcatctagtgctatacttactttatttttctagatttaccgtttctaaattggtagctagcaatgtcttttgttctgatattaaaattcctgaatgaggatctgttttgctttggctgttacttgattcaatgtcatgttaatgcaatgtgttttaccatgccagcgaatttagagagaatagcataaaacaactgagagtgaattgttctatttttgttgtgcatgctcgatttcacttttaaaaaatctgccaccatctgttgtttgttgtgagtatgctaaacaacatgttgtgaagttaaagtctagaatcagggctgtagatatcgttcataagaaaacttcacttgtgctatggtattttgatcagcccagcttgtctgtctactctgcatggtttcttgcggcttcagttgttaattttgctttctgaaatctttgatcaaaatactaaaatctttgatcaaggaatacgcttgcgttatggccatggctctcagatgcaaagccaatggcatgcatatggagataataggaggtttagattgtgatctcagaagggtatatgcactggatgggaattatggtatcagcatcataagaatattttagctcttaaacattaagtgctgctgaaacacgttcatagtttcaagtcagcatagtacttatcaatcaaacatgttcaaagtttacaacagtaattattccggttatatatgaaaaagccctcataggtgatttgatctttgcatatactgccctctactgcttgtgatagtttaaaagggttctatctttcttttactcctaatctcatgtttagatttaatttcttaattttatgattcattagactaaattaaaactgatagctctcatggaacaaactccatgctgtgagacaactcaagataactttgccacatccaacaggactacaggggtatagtacacccacctgtagctggtaattttcttaccatgagatctgattttggtctgcggcttccttcccatctgtcaactaaaaatataataatctgatgaaatgcagctgtagttaattatcatattacctccggactagcacaaaacaaatcaattcttctatcacaaaaatatgtggtgaagtactgaaaacaagagcagatcatgtttaatcctttttttggaaggtattttgatactcactattacgtgacaacgatgagggtggcaatcatcatattgtagaggaaaatacaagaaattatcaaaaagccaatcgcttgtatatataaattaaattaaatttgaacttgtcacttgtataaaaccaatttcttggtgctggtagtaccttttttattgctatgttctcgatttccagaacagcaaggagctgctgttgcataggaatatagttaaggtggagctgagtgtccaaattattagaatgttctcatgtcatagcttatttctgcagtatatgtgctttgttatcttacgaatgatatcttggtaaaccgtggttgaattgtttagtaattttagtttctgttgcagcacatgggcagtccgctagtatattattatttagatttgagcctgaactacctagcaatcttttttgctggatgtgtgtaagtgtatgtaccaaagtatatggaatctttgtctagcctgaagcggagccaggcattatgtctgtggggattcacattcaagtatacaaaatatacctattgatttttctatgggcaactttatggttgcagatgctgatttactacattttggtgtcacatactccctccgtcccataaaaaaacaaatctagtacgggatgtgacacatcttagtactacgaatctggacagactgtcacatcccgttctaggtttgttttttatgggacggagggagtagtatttgcacgatgtttgtttgtttgtatctgcatagcttttgtattgtatgcaactacattatgacgtgtttccccctatctttaattgtccactttcattgcccataccccttaagtcattaggtgaaatgaggactaggttaaattattttttttgttttgaactgattgccatgttcttctcatttaactcattatggatgtacatcattacccattaatttctgaatttggaccagcttagcacaaaaagctgaatgccctattctccagaaaaaaaaaactcatccattttagctgcagattgcctcattgtttcccctatttctgtgcaatattgtttggatgaagttgttctctagaaatctaaatagtctgctgatagttgtttgtttgttggaaatgcagaaaaggtacgaagatatatcagtgctggggcaaaggccggccgagtagaacaatgaaagcccagcactcatcatcttgcttgctttacgtgaaagtagacactcttttaagctctaatgtcttgtcattttcttcggcacaataagcaatgtaaaacccctatctccgtttctgagagttagcactcgattcatttactcgaacatgatttgtgaattttgagatgcatggccaaaacctttcctgtagccatgtgatggtgcgctctggaatcagttgaaaactatacaaactcctcggaatgaaagttattttgaggttttgtttctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0400400, RefSeq:Os05g0400400