Os05g0271900

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0271900| Description = Protein prenyltransferase domain containing protein| Version = NM_001061598.1 GI:115462926 GeneID:4338264| Length = ...")
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Gene Name

Os05g0271900

Description

Protein prenyltransferase domain containing protein

Version

NM_001061598.1 GI:115462926 GeneID:4338264

Length

1642 bp

Definition

Oryza sativa Japonica Group Os05g0271900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11011488..11013129

Sequence Coding Region

11011551..11013017

Expression

GEO Profiles:Os05g0271900

Genome Context

<gbrowseImage1> name=NC_008398:11011488..11013129 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:11011488..11013129 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcgcccgctcgagacacgctgcctcgctcgcagccgcagcatgtgggggtacctcctccgccgctcgctcgtacgccggcctcgacctgctcctgcaggagaacttctcggccccgcgccgcgtcctccagctccacgccctcctcctcacctccggcgcgctctccctcccgcaccccgacccggccgccaccgccgccttcccctacaactgcctcatccacgcccacctccgcctccgcggctccgcttctcctccatggggccccctccggatcttctccgccatgctcgcccgcggcgtccgccccaaccgccacaccttcccctccctcctcaagtctagcgccagcttcgacgcggccaccccgaccctccacgcgcagtgcctccgccgcggcctagacgaggaccgcttcgtcgcctgctcgctcctcagcgcctacggccgcgacggccatcttgtgcgcgacgcgcgtaaggtgttcgacgatatggctagtccggatttggctacctgtaatgccatgcttgacgtgctgtgtctctccggagacatgtatggtgcccgctgcttatttgatcgtatggtggtgagggatgttgtatcgtggacgacgattatctctgggttaacgaggattgggtgtcactgggatgctgttgaaatgttccgggcatttctgctgcagaataagggacggctttctgaggccacactggtaagcgttctttcagcttgtgctaatctggatgctgtggaggggcttgcggttggaatggctgttcatgggcatgttgttcgccatgaggttcagttcactgcgttcttgggcacagcactcatcgacatgtatggtaagtatgggaagcttagctgttgtagccatatctttcatttggtaagagacaaggaggtttgtacgtggaatgcactgttgtctgcattggctaatcatgggaaggaggctgaagcactggttaagtttgagatgatgaggagtgaagggttcttgccaaatcatattacattcgttgctgtaatgacagcctgtgctcgcgcaggattggtggagactggcttagacttcttcgaagagttgtttactgaatataaggtcattccaatgatggtgcattatgggtgtgtggtagatcttttaggccgtgctggtcgttttctggaggcaattcagattatagagaggatgccatttatggctgatgattctgtgtggggtgcacttcttggggcttgcaagatccatggcaatatagagctttctgcccagatcagggagaaactaatagttcttggtggtcagcaacctggacggtatgtgactgttaggaacatgtatttagaagaagggaactggtatgctgccactagaatgggagaggtgatgcaggaggctggtattaagaagatagtgggtatgagcagtgttgtgcttaattga</cdnaseq>

Protein Sequence

<aaseq>MIARSRHAASLAAAACGGTSSAARSYAGLDLLLQENFSAPRRVL QLHALLLTSGALSLPHPDPAATAAFPYNCLIHAHLRLRGSASPPWGPLRIFSAMLARG VRPNRHTFPSLLKSSASFDAATPTLHAQCLRRGLDEDRFVACSLLSAYGRDGHLVRDA RKVFDDMASPDLATCNAMLDVLCLSGDMYGARCLFDRMVVRDVVSWTTIISGLTRIGC HWDAVEMFRAFLLQNKGRLSEATLVSVLSACANLDAVEGLAVGMAVHGHVVRHEVQFT AFLGTALIDMYGKYGKLSCCSHIFHLVRDKEVCTWNALLSALANHGKEAEALVKFEMM RSEGFLPNHITFVAVMTACARAGLVETGLDFFEELFTEYKVIPMMVHYGCVVDLLGRA GRFLEAIQIIERMPFMADDSVWGALLGACKIHGNIELSAQIREKLIVLGGQQPGRYVT VRNMYLEEGNWYAATRMGEVMQEAGIKKIVGMSSVVLN</aaseq>

Gene Sequence

<dnaseqindica>64..1530#atgatgccgcagcgccgcctcgccgcgcgccaccgccgcccgcctgcccccaggtagcgttacatgatcgcccgctcgagacacgctgcctcgctcgcagccgcagcatgtgggggtacctcctccgccgctcgctcgtacgccggcctcgacctgctcctgcaggagaacttctcggccccgcgccgcgtcctccagctccacgccctcctcctcacctccggcgcgctctccctcccgcaccccgacccggccgccaccgccgccttcccctacaactgcctcatccacgcccacctccgcctccgcggctccgcttctcctccatggggccccctccggatcttctccgccatgctcgcccgcggcgtccgccccaaccgccacaccttcccctccctcctcaagtctagcgccagcttcgacgcggccaccccgaccctccacgcgcagtgcctccgccgcggcctagacgaggaccgcttcgtcgcctgctcgctcctcagcgcctacggccgcgacggccatcttgtgcgcgacgcgcgtaaggtgttcgacgatatggctagtccggatttggctacctgtaatgccatgcttgacgtgctgtgtctctccggagacatgtatggtgcccgctgcttatttgatcgtatggtggtgagggatgttgtatcgtggacgacgattatctctgggttaacgaggattgggtgtcactgggatgctgttgaaatgttccgggcatttctgctgcagaataagggacggctttctgaggccacactggtaagcgttctttcagcttgtgctaatctggatgctgtggaggggcttgcggttggaatggctgttcatgggcatgttgttcgccatgaggttcagttcactgcgttcttgggcacagcactcatcgacatgtatggtaagtatgggaagcttagctgttgtagccatatctttcatttggtaagagacaaggaggtttgtacgtggaatgcactgttgtctgcattggctaatcatgggaaggaggctgaagcactggttaagtttgagatgatgaggagtgaagggttcttgccaaatcatattacattcgttgctgtaatgacagcctgtgctcgcgcaggattggtggagactggcttagacttcttcgaagagttgtttactgaatataaggtcattccaatgatggtgcattatgggtgtgtggtagatcttttaggccgtgctggtcgttttctggaggcaattcagattatagagaggatgccatttatggctgatgattctgtgtggggtgcacttcttggggcttgcaagatccatggcaatatagagctttctgcccagatcagggagaaactaatagttcttggtggtcagcaacctggacggtatgtgactgttaggaacatgtatttagaagaagggaactggtatgctgccactagaatgggagaggtgatgcaggaggctggtattaagaagatagtgggtatgagcagtgttgtgcttaattgagttaattctatcacatgaagtagtagttatattattcatcggattagatgtttgtaagaacagaataggtatgatgttacttctagatgttggaattaatttgtcatttggg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0271900, RefSeq:Os05g0271900