Os05g0272200

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0272200| Description = Conserved hypothetical protein| Version = NM_001061599.2 GI:297604183 GeneID:4338265| Length = 2283 bp| Definition ...")
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Gene Name

Os05g0272200

Description

Conserved hypothetical protein

Version

NM_001061599.2 GI:297604183 GeneID:4338265

Length

2283 bp

Definition

Oryza sativa Japonica Group Os05g0272200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11036736..11039018

Sequence Coding Region

11038140..11038661,11038799..11038927

Expression

GEO Profiles:Os05g0272200

Genome Context

<gbrowseImage1> name=NC_008398:11036736..11039018 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:11036736..11039018 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgtcaggtgcccgaatcaccaaacttcaaggtgagggtgaacctggaggtgaagcaaggcggaggccccagcagccagttctacctcatggacatgggcagctgctggaagaacgacggccgcccgtgcgacggcgacaccgccacggacgtgacgcggtacagcgagatgatcatcaacccggagacgccgtcgtggtgcacgccggggaaggtcgggctgtgcccgccgtggcacacgttccggaacggcacgcgcgtgcaccgcaccgacgccgcccggttcccgtacgccgcctaccacatgtactgctcccccgggaacgcgcgcgccgccgagcagcccaccaccccgtgcgacccctacagcaacccgcagccgcaggagatcatgcagctcgtgccgcacccggtgtggggcgagtttgggtaccccacggcgaaagggcagggctggatcggtgaccccagggcgtgggagctcgacgtcggcgccatgtcacaggcgctctacttctaccaggatccgggcacgccaccggcgaagaggaggtggtcgtcgctggacgtgggaacggagatatacgtcagcaaccatgcggaggcggagtggacgttgagtgggttcgacatccttgtgccaaaggagtag</cdnaseq>

Protein Sequence

<aaseq>CQVPESPNFKVRVNLEVKQGGGPSSQFYLMDMGSCWKNDGRPCD GDTATDVTRYSEMIINPETPSWCTPGKVGLCPPWHTFRNGTRVHRTDAARFPYAAYHM YCSPGNARAAEQPTTPCDPYSNPQPQEIMQLVPHPVWGEFGYPTAKGQGWIGDPRAWE LDVGAMSQALYFYQDPGTPPAKRRWSSLDVGTEIYVSNHAEAEWTLSGFDILVPKE</aaseq>

Gene Sequence

<dnaseqindica>1405..1926#2064..2192#gatccctccgcgccggatggccgcgcgcgtggcggacgccgcctctctcctcggcctcctcctcctcgtctcgtgctgctcgctggcgcagtccgtcacgacgaatggcggcggctacgtgtcggcggtcggggaccccggcatgcggcgcgacggcctccgcgtcgcctgggaggcatggaacttctgtaacgaggtcggccgggaggcccccggcatgggcagcccccgcggcgccgactgcttcgacctcggttggtccctccatccttgctcttctttcctctaatccatgtcgcgctcgcgagattggtcaagttagttcgatcttggttggtccattcttgttaaatccaaaccgatgtcgctgtcgctagatttgatgagttcattttgtcgaattgacggtgagaaacgtgaaatctttgcagaggatggcgtggacgagcacggccagccgacgcgcaaggtggtgcacagggtgacggacgccgacaacagcctccgtgccggcgacccgttccccggcacgccggcgaacatcacggacgtcgaccggtacgcggcggcgaaggagctgtacctgggcgaccggtgccaggtggcggacggcccgtcgccgtggcaattctggatggtcatgctcaagaacggcaacctggacacctccgccgccatctgcccggacaacggccgcccggcgcgcccgttcccgcagggcaagttcccgtgccccggcggcgccggctgcatgaacccgccgctcgtgttccacaaccgcaccgcgctggacgccaccgggcggcgcctccgcggcgggctgttcggcacgtacgacctcggcgcggcggacctcggcaacaaagacgtgtcctactactcggtgacgtgggagaaggaggttggcggcgccggcgggtgggtgttccaccacaagctgcgcacttcaccgaagtacccatggctgatgctgtacctccgttccgacgccacctctggattctccggtggctaccactacgagaccagagggatgaccaagatagtaagtctattctgttaatctaaaataaagtccctttcccattcactatcactgaccttacatccaagattaagttttatttaccttgcggtttccattttcaacaaaattacagatgactaattatatatttcttgactattactgactacataactgctcttaaaggatttggtcgtagttggtacgatacgccgccttctgtattaggttgacaattttgtagcatgtcatattcgatcattttgcatgtttatctgactgaaagttgtatttaatagaccgtgttcaattttcaaactagtgtatcatttttatttcgtgaccggaggaagcagaatctgaccgaaagttcgtgatgtcaggtgcccgaatcaccaaacttcaaggtgagggtgaacctggaggtgaagcaaggcggaggccccagcagccagttctacctcatggacatgggcagctgctggaagaacgacggccgcccgtgcgacggcgacaccgccacggacgtgacgcggtacagcgagatgatcatcaacccggagacgccgtcgtggtgcacgccggggaaggtcgggctgtgcccgccgtggcacacgttccggaacggcacgcgcgtgcaccgcaccgacgccgcccggttcccgtacgccgcctaccacatgtactgctcccccgggaacgcgcgcgccgccgagcagcccaccaccccgtgcgacccctacagcaacccgcagccgcaggagatcatgcagctcgtgccgcacccggtgtggggcgagtttgggtaccccacggcgaaagggcagggctggatcggtgaccccagggcgtgggagctcgacgtcggcgccatgtcacaggcgctctacttctaccaggtattgcacgatcgattaatctttccttgtgcagagaccataagtagttactctcgttgttgaaaagaaacagaaggatttttgggtggatcggtggtgaggtgaacatgatggatatgttgttgcaatggctgcaggatccgggcacgccaccggcgaagaggaggtggtcgtcgctggacgtgggaacggagatatacgtcagcaaccatgcggaggcggagtggacgttgagtgggttcgacatccttgtgccaaaggagtaggattgtgttgggtcgtccaaaggaggactcgtcgacattgtttggagcgtggatgaagggggttataagcaattcttacatgatggaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0272200, RefSeq:Os05g0272200