Os05g0274300

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Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0274300| Description = Conserved hypothetical protein| Version = NM_001061606.1 GI:115462942 GeneID:4338272| Length = 5828 bp| Definition ...")
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Gene Name

Os05g0274300

Description

Conserved hypothetical protein

Version

NM_001061606.1 GI:115462942 GeneID:4338272

Length

5828 bp

Definition

Oryza sativa Japonica Group Os05g0274300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11211451..11217278

Sequence Coding Region

11211506..11211581,11211667..11211814,11212795..11212982,11213071..11213242,11214060..11214262
,11215063..11215185,11215261..11215364,11217002..11217136

Expression

GEO Profiles:Os05g0274300

Genome Context

<gbrowseImage1> name=NC_008398:11211451..11217278 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:11211451..11217278 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggcggcggcgatctcagcccctccagcgccccctcctccccgtcgtcgtcatcggagccccttccccatgagtttgccgaatacgcggccgtatccccggcaatcgatggcgagtccgacgggtgctgcgtctgcgatgaccccgaggtggaggccttcctccatggcggccgactccaggatcggtctctgcgggaggcgaaagaactcatcaggaggtataaacctggggacttggttgaaggagtgtgtggcacaaaatctggagactatgtgttgcctgatataacaacgtttctattggtgggccctagagatgctggcaagagcgcacttgtgaaccgaattacacgggtcttcgacaaggatgatgatcctgatgcaccagatcgagcacaggtctcctgtaattccaaatcaaccggtacaagcttccttcgggagtacagagttcctaggaattcaaattctatatgtatttatgatacaaggagcctctccaacaaccatgaaaacaattttaagatgttgcaaagatggatgacaaagggacttagccatggagatatcatcacgtgggataatgataattactctaagattcagaacatcaagtcaatgggaagacaatacagttttctgcgttgcaagaccaggaaggtcaactttgtgatatttgttgttaatggtgcttctgtcctcgaatcaattgagaacaacaacaaaaactacattgatatgctccacaaaacatttatgtatccattcttgtcatttggagatgataagcctgctgttgtggtcactcatggagatagactaacagcacaacagcgcatgcatgttcgaaatgagttagtagagttgcttggcattcctctgcagcaaatttttgatatatcaggatgtgatgactacgaaactgacttgtctgtattggatatgttgcgttactgtatccaacatgctgagcaaaacttccctattaaaaagaattatcttttagagatgcatggacgtgaaactcttaagcagatagcagtggggttgatgggcttcgatgcagtcattgaaacggccattattttcctatgcatcgttatccttctgcttcgtgtatcagataaattggtgcaatggtaa</cdnaseq>

Protein Sequence

<aaseq>MGGGGDLSPSSAPSSPSSSSEPLPHEFAEYAAVSPAIDGESDGC CVCDDPEVEAFLHGGRLQDRSLREAKELIRRYKPGDLVEGVCGTKSGDYVLPDITTFL LVGPRDAGKSALVNRITRVFDKDDDPDAPDRAQVSCNSKSTGTSFLREYRVPRNSNSI CIYDTRSLSNNHENNFKMLQRWMTKGLSHGDIITWDNDNYSKIQNIKSMGRQYSFLRC KTRKVNFVIFVVNGASVLESIENNNKNYIDMLHKTFMYPFLSFGDDKPAVVVTHGDRL TAQQRMHVRNELVELLGIPLQQIFDISGCDDYETDLSVLDMLRYCIQHAEQNFPIKKN YLLEMHGRETLKQIAVGLMGFDAVIETAIIFLCIVILLLRVSDKLVQW</aaseq>

Gene Sequence

<dnaseqindica>56..131#217..364#1345..1532#1621..1792#2610..2812#3613..3735#3811..3914#5552..5686#accccgaagccccgaactggccgtcgaagccaacccggcgattccgcaaaaatccatgggcggcggcggcgatctcagcccctccagcgccccctcctccccgtcgtcgtcatcggagccccttccccatggtaatcgctccgctattacctgattttggtcccaattccgggctcttgcgatcacttcttgattcttgaccacctccggttgcagagtttgccgaatacgcggccgtatccccggcaatcgatggcgagtccgacgggtgctgcgtctgcgatgaccccgaggtggaggccttcctccatggcggccgactccaggatcggtctctgcgggaggcgaaagaactcatcaggaggtgacgtcatggttcttgtttttttcccccctcccttgtctgttttggttgtccaggccaatacaagaatctactagactgctatacttcgttgaattttctctgattggctggttattgtgcatttgtatgggatatacagtttggagcttctggttaaggaagcaaccattgtatcaatcctgaaactataatttgtaccaaatacattctactggagaaaggatcgctttgatcaacagcttcggagtatggtgcttatgatagtaaattttaccatcagtgtaaggggaatcactatttcatcatagtccttgggtttgaaattgtgggtcttttatagactctgaatttcccaacaggccacggaaatgggaatgatatgtgtacaatttttttcttacaaacgttgtacaacactgatgtgtcacgctgcaattgaatcttgatgatttataactttcatttaattaaatcaaacggttggaacctttgttaggacttaggaggatgtttgtaagattatttttagtacatattctttcctcttagctttcggataatctgctatggatatctttccgtgggtttattgtctttgccaaagaacctggtctgatggcatggattgcctctgaattgctgtggataaatatttaagtttcactctatcttcagtgtttgcctccatcttagagtttgaaagtgttttagtaaaaaggtggagatctgtgaaatgagcaagttgtgcatgtctctcctcaccacacacacacacacacacacaaaaactgggagaaggctaatttttctccatccaaccagacaataatttattagtaaagcaaacttatatgctgattgctgactacactgtgatgaatcagtaactagcaagaagttcggccataaaccataagtcaagatctgatctttttgtcaacgagttttttttttaatgttagtcattctataatcaggtataaacctggggacttggttgaaggagtgtgtggcacaaaatctggagactatgtgttgcctgatataacaacgtttctattggtgggccctagagatgctggcaagagcgcacttgtgaaccgaattacacgggtcttcgacaaggatgatgatcctgatgcaccagatcgagcacaggtctcctgtaagtcttatcatttcaggggtgactggttcatttggatctgtgcaactacagtttattgtttttgtttcctttgccacttgtccaggtaattccaaatcaaccggtacaagcttccttcgggagtacagagttcctaggaattcaaattctatatgtatttatgatacaaggagcctctccaacaaccatgaaaacaattttaagatgttgcaaagatggatgacaaagggacttagccatggagatatcatcacgtggtaagtggtggctcttgctttgttttatacattatcctctcttttttaatgctctgcttaactttggtttggagaaatttccagggccatcatttggcttattcagggaataagctgaacggcataatggcatatttgcaaacgaaaaataatttgtgaataaaacatttatatacattttcttagcgatttaaaagtaaaggctgaaaaataaatgaaaaaaccccagaatcaacttcaaatttaaggttgaaaattcaaattttgtcttaagcataagcgaaaagatgaggctgttctatgatgggactttgtttacttatcctcgtactggtagtgatcaaggtattatctgctgactgactgactctaggactctgagttctccacactgaaagaacaagattcaagtatatgtttgtttctgacaacagatatgagattgtcaacatcttgtcattcaggacataaagtatatataacaagttaagatttcttttgaatttttatgtggcatcctggcattactgcagtcaaacagttctaactttgacttatcatttttattgtcacctcgtgcttctttcttaatccaagattgaatgtatttaacaagatttatttgagactttgagaagcacatgaagaattatttgaagagttgcttttatcttatcatttgaaatgtgcattgctaggcgttcagtctatttttctttattttcttcgacctggtcttagtcttaggaaatactatgcaaagttaactactcagtattacactagctggattaattcagactgatgcttaaaacagggataatgataattactctaagattcagaacatcaagtcaatgggaagacaatacagttttctgcgttgcaagaccaggaaggtcaactttgtgatatttgttgttaatggtgcttctgtcctcgaatcaattgagaacaacaacaaaaactacattgatatgctccacaaaacatttatgtatccattcttgtcatttggaggtatgaattgctaagattcttgcagctcttttttttttaaaaaaagattcttacagctttatgcagttgttgggtgtgtttagctatgataataataggtttattggcacatcaattcctataaatgatttgctttgtgaaaccatgagtttaccagcccagcataacaacatacatgtcagcactcagcagtcctattggaaatgcataaagaattgaataaatgaacacagttgctcaacaccttttccaatctgggcaactgttgcacatttaatttccatccatgttaagtccccttttgcaacacatgaaaattttcttggtacagcacgacttgaactgtttatgtgaaattacagcattggtgtccgaagtgtcccaaagtgactcctctgagctctcatttctctcaccctctctcagtctgctcatggaagtttctggaataatcttgacctttcaccattcttttatttggacttatcactcatctatcatccaacagcaagtacggtatcaattgttgcatccaatggctcatactttcctaatgatgtggctcagtaccgttacattttaggttttacctttcacttatagagatatatcacttctgtaatttgtgtatatttattttttacctgtgtcatacacattttattggtttgattaatatatatcttttgtataattcaatgccttttccttggcaacatgttctgctgacaattttttcatttatgaaattatatctgcaactaaacatatatcaagtgatgatacacatgatactgcagatgataagcctgctgttgtggtcactcatggagatagactaacagcacaacagcgcatgcatgttcgaaatgagttagtagagttgcttggcattcctctgcagcaaatttttgatatatcaggtaatgcatctttgctttcctattgttttttaaaatttagtataatgagtattctacattgtaacttctacacaggatgtgatgactacgaaactgacttgtctgtattggatatgttgcgttactgtatccaacatgctgagcaaaacttccctattaaaaagaattatcttttagaggtatgctttcttcctttgtatcttttatcacattatcttgcatcatacattatgaaaatttaacatttattgtatgatgtgttgaagatttatttgatttgcttttatgagagttataagttactagctccatagatggttctcctcttttgatcattttcccttgggaaaaagatctgtgtggcgcagccttcaaccatttcatatttgactcctagaatataagtaaatgaattccatttctacgttaaatagaattgacatgaattctattcaaatataattgtttcatgtaaattccctctagaattataacaaaatctgaatttccaacttataatggagaagcaacatggtaacaaaggtaacaaacgtctagagtaagaatagtttgaatggaatgattggacaacagaaaaaaaattgattaaaaagggtcagaaacaattctataaacatgtaaacatatatttgaatatccaagaaatatgcatactagtaatcttgaagctgacaagcgttggaatgaggataaggtttgatgaaagtgcagcttccactatagcattagaggaaaggagcagagagaaaacaattattggcaagaagaattgccatagcatcatgtagaggagagttgtcatgatggtgaggcctgttcttttctaagctattgatgatgtggttggaaaatactgtgtatatttgtaatgtgagttgggaactggagatgggattttgactcatccaactccactggctgctaaacgcacctactctgaaaatcaaatccgatttccaaccccatttgaaggggcacaatcagcatgttatacctttagtgtcctctgacatttcttacgtttggcttgagacttgagagtcaaatttatgcaaaatgccaaaacagtaccgatgacaggtccatgtctccattttaggataaaaaaaaatgtttgtttacattttttaaccacatattctgacaattactttttttaagaaaatgcttggaatatataggggtacatgaaaaataagaatgcgcattttcaaaatcttgttttcctaatctgcaataaaattttgaatctaaactcacataatttataatctgaattgaatttttcaaagaaataaacgtcaataaaatagaagataatggttccagtgagatttttcaaaatttctcagagttggatgttaaatgatgcctttggagggaaaaaagctaacaacgttggcattttgtggtccacctcagttgtgatggtgttgtccaactttgtgatgttcttgattgtatcaaccaaatttgttttactgaccctatgctactttccttatagcactatattagtgttattttctattttctagtgatactccattactccccgattaagtagaagcatgagtaaccaggaagaagggtaacagatgtaacttttgaagtttgaccctccttttcttttgaaaaataaatattcaagtgtactgccttttcgtttcccctctctgttttgctgttgtgctagaaaaggttaaaaaccgctctcttttttgtctattccactgcacaacatcctttagaaattgttgggtgagaacttactaaaaaatctcatgttgtacagatgcatggacgtgaaactcttaagcagatagcagtggggttgatgggcttcgatgcagtcattgaaacggccattattttcctatgcatcgttatccttctgcttcgtgtatcagataaattggtgcaatggtaatcaacttctgcatatggtctgtatatatatatgtataaaggggagaagagttatcaccttctcaggagtagcaaaaacaccatggattattatgtaaagcatgtttacattgtgaatactaatattgtctgggtatgcttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0274300, RefSeq:Os05g0274300