Os05g0275600

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Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0275600| Description = Conserved hypothetical protein| Version = NM_001061609.1 GI:115462948 GeneID:4338275| Length = 5541 bp| Definition ...")
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Gene Name

Os05g0275600

Description

Conserved hypothetical protein

Version

NM_001061609.1 GI:115462948 GeneID:4338275

Length

5541 bp

Definition

Oryza sativa Japonica Group Os05g0275600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11325456..11330996

Sequence Coding Region

11325509..11325571,11327927..11328089,11329194..11329287,11329665..11329864,11330518..11330615

Expression

GEO Profiles:Os05g0275600

Genome Context

<gbrowseImage1> name=NC_008398:11325456..11330996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:11325456..11330996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggactccggcgccatcctccgccacatatcctccctcaaggacatgcttgacaaggtcaacgaagagattgaagagaatattcaaaagacaagggaaatagagtcagaaatagtgaagcattctgaaactgaaaaggagtatatcatgaaagagtctgaactaatgaaaggggtatcaattgctgagtttgaactcaatggcattatacaagtggctgctgctgaaacagactcacttaaagtgatggaaggcaatttggaattccagaaagctactctgaatggaattaggaaaagattttctaataaaatggaaaagttcatcaatgaatctaaggggttccaggctaacatgcttggagatttgaacaaggatttagttcttttacttaaggagaaaggttcgctaggggatgagagtgagaacttgaaaatgaagatcaacgcaatagaaagttcgtcacgtgattactttgctgacattcttgaggagctaaatatggaaaattcagttttggaatctgaattacagtataagatttcagaatacatggatgttatgaaggatataagcaatctgaaggctctatttagttcgatcaattcttag</cdnaseq>

Protein Sequence

<aaseq>MAEDSGAILRHISSLKDMLDKVNEEIEENIQKTREIESEIVKHS ETEKEYIMKESELMKGVSIAEFELNGIIQVAAAETDSLKVMEGNLEFQKATLNGIRKR FSNKMEKFINESKGFQANMLGDLNKDLVLLLKEKGSLGDESENLKMKINAIESSSRDY FADILEELNMENSVLESELQYKISEYMDVMKDISNLKALFSSINS</aaseq>

Gene Sequence

<dnaseqindica>54..116#2472..2634#3739..3832#4210..4409#5063..5160#ctcctcttcttccgtcgccggcgcggggagctgctcgtcgccggcgcgcggtgatggcggaggactccggcgccatcctccgccacatatcctccctcaaggacatgcttgacaaggtccgtcccgctctctgctgcttcctctccgttctctctcctgcgcactgtactggtagtcactagcaatggcgatgcgatgaatgcctcaatgccgtggaagtctcgcgttcgctctaggtggtcgagtcgcccgccgcggcgattgggcgtcgccaatggagcgatcaggtggccgaatcgcgcgtccgcttcggcgattaggcgtcgccatggcgaatcagtcgtccgaatcgcctgactaggcgtccgcttcgacgattaagcgtcgccatggcgatcgactatattttgagagagagagagagagagagagggttggggcacgaacacatcgtggggctgaggggaggcgaaccctagccgccgccgccacagccgcgaccgtggatcgtcggcgtcgagccatcccctccctgcgcacttccttccggtggccaccgtcgagagctcctccctccgctcttccttctggaggccgtcgtccccagctcctcccgtgccggtttgctccttttccgtccaatctctctccttcgcagcttcgctgctttttctctgtttcttggtttgctcctctatctattcaacccagaattttcttttctctttcttctctactttcttcttctgctctctccccattccccaaacttcttttgtttgctgactgttatctcatctattgcccacatatcagtctcatcatggtggatccattcgccagcgaagggagtcagtatgacccatccaaggatcctgaacggaagtctaagtcaaaagatccgggatggaaatactgcttctggccagacttgagcaacagagatttgatccactgctcgctttgtggcaagcaaatgattgcaggattcaagagagtcagcaacatcttgcaacaggatttggagatgtgcagtgcagcggtgccccaatactaccacagctatcatgaaagagatgagagcatatctgaagaagaattcgagaattggcaaatatctcaacttacacccctcctcttatcggccaatgccaagttctgagacagctgccaaaaggaaacaagctcctgacgctcttcaatttggacgaccaaccccaaaacaaacaacatctgttgcttctatgctttgcaaggcacctgaagaggttgacgaagatatccatgccaaggggccttctcaatctaccattgagcaatgtacaaggcagtacaatggaaaacaaatggtccatcagcaaatagcaaatttgttttctgaatttgacataccatttgctgctgcgcactcaaggagctttgagactatggttcaatccatcatacaatttggacctggttataagcctcctagtcatcaggattggtgggttccgttgcttgttggggcaaaggagactacgttgggagccagtggtaatatgggagatttgaatgaatcggacgatgatatttggtagttaagaccagaatcatttacctatgatgtcatgctagtatactattatgctgtttatctgtctcggagaacgctgatgcttatgacctatgtacttttggtggatgatttttgctatatttattacctttgataacttctactaatgtgcaatgttggtatgtttctgtattattgtttgctaaataccattgcttgtacttgtcacctaggcatctgcctaaataactaggtgtgcaaagaggtgcttgactctcaggtgctatgccattaggactaaggaaacattgtcattcctgttgcaatttttattgctcgagctatatactgcagtggctttgtttaccattggtttcctgcttccataaatggattctttacttgtactgagaaagaggtggtgaaataaatagatcaagggtagatattaattattcttgagctccactgttacatttttttttcaggatgcagatgtccattaaaattggagctttcatttggcttttttctgtttggagatgacttaattatgtatgtgtaactgaccaagtattatattttaaaacacatatctggtattgtctttcaactgaacaggatgcagaatttctgacttggacctatggctttatgatcatctatagtttcacagaagcaacgaattttggacttaatgtatagtactagcttgtaacttactgcgataaatccagtactctctcttcaagcaaatgtcctcctctggctgtagaatgggaacatgtgcaacataatgcaaggatgatttttgagtgtgaagaactgaattcatcatagtagcgcgttgaactttttcattccagatcttatgcgtaactgtgctatattttctctgttattcttgaattaggtcaacgaagagattgaagagaatattcaaaagacaagggaaatagagtcagaaatagtgaagcattctgaaactgaaaaggagtatatcatgaaagagtctgaactaatgaaaggggtatcaattgctgagtttgaactcaatggcattatacaagtggctggtaattattgcctttattcatgcagttattagctcagtggcaaatatctaagctgtggttaacttgcatagtatatccttgatagcagtatgttttaagtacgatagcagtaattttttggacaaaggttattaaagttgcttcagtaattcccttttgaggccaaagataatcttgctcttcaaaacttgaagctaaaatattgttttttcccttgattatgcaactgaaacttaaccaatttatctcgaccttaacttcaacgcatgtggctaggaatgtatctgcatgtggactctatttttcagattgtactctctagcaacactgatcttgtatctttaacctttcttctgtcatttctagtgtagatttatgtcatgctttccgtacaagttatggttgtttgttactagaagcttagccttttaagtacattgcaaggtttttttttatgtaaaatactgcaaggtattattccaaccaagtccattctgtcatttacttagtgtttacgcatcatagttttctttcctaatcactgttccccacagtgatctgtatgttaatgaatattattatatatcacacaaatgtttctcaaaatccaataagacccatctacattttgcatttgagttataaaatttgattatctggagacagaggtttactttccagttctaaatacactttcactgtaatcttgtgagagcaacagctttctgtagatgtgtagctttggacatgtgtttggttctttatttcatttttttagtggaatttggctatttgtttaagattattccattagttggatctgcacaattacactgtgtgtactgcagggaccctcatgaaaatcacacctgccattatctcattttctgcatgcgaatccaacacatgattcgcattgttgttctgtgctaattgtgaactgggtggttctatcttaacaaataacagtaaaaaaggcactttctttactgctgttgatagtattcttgtgttattttttcatgtctcatgctggatggaattttcaatattgtggtatgagtactctatgaaacacctaatcatttttagcttttcaaacagctgctgaaacagactcacttaaagtgatggaaggcaatttggaattccagaaagctactctgaatggaattaggaaaagattttctaataaaatgtatggtctacatttggtccattgatgagatcaaatggttttcagcgttctgacttatattgaaactttacagctctagttttacatcagataatatgacgtttttcttgcattttcttgttaaatgggaaaccttctctgttccttcaaagtgctgcaatagagttcatgtactaaaccactattacgaacagctccgtgtactgtgactgatttaaccactgtcatgattccaaattattcatgacttggagctcactaaattcattaaaatgattagatagtaggattgcaaatatttattctctgcttcttttacttccaaaaagagctgaacaggaaataatgcctcagattgtttacattatatttatcagggaaaagttcatcaatgaatctaaggggttccaggctaacatgcttggagatttgaacaaggatttagttcttttacttaaggagaaaggttcgctaggggatgagagtgagaacttgaaaatgaagatcaacgcaatagaaagttcgtcacgtgattactttgctgacattcttgaggagctaaatatggaaaattcaggtaattattgtggaggttgtttgagctcaaaattttaatatttacttcaacccttagttaatgttttttgatgttttgttacaaaatctttgtttgtattaattatatttaattgaattgcattatatgttgcttattttattaacactattattgtactaaagtttaggaagctctatcttttgaggcacactggtatttccagggcttgttccacagtgcacaccatcatctgaatatttaaacattgtacataagaattgataactttatactgagttaaattatttgtcttgccaacttctctgaagaaagtactcaactcactttgtatgatgagaggaaaataatatgtaatctttgtgactgcattgtttccctttttctctcttgtgtgcagtgcgagatttggtttagctaatttgttgccagaaaccactttacatatcttctattattttgccataacctgcaactatgttatgttctgtcactgattgcattttagactttcccttctcctttaagcgtggaaatttatggttgtttgtgaaccgatatatgtatgtaaattgtgattactgcttttctgtcttgcacctacgttataaccgaagtttaccttttgttaatgggtttaattgatgttgcagttttggaatctgaattacagtataagatttcagaatacatggatgttatgaaggatataagcaatctgaaggctctatttagttcgatcaattcttagtaacaatattcatcggtggaggtaactggatgtttaattaggctcgacacggttgtctgtgataaaaaatacgaagttttttctgattggctgtttttgttctcctgcgtaggtatcctacctaatcacgaagtatatgtagaggcatagcatgtagcattctggctggagtaagaattcccaattttgttttagagcattcctgatttttctccgttcaaggaatcattatcttgtatagagcagagtgcgaataaaatcaaattggttttgctttacaaattggcccttgcacctatcaaatcaaattggtttggctttactgggccacctcttgtatattttcttagatcacccgtggcaatgaaatgaagatcgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0275600, RefSeq:Os05g0275600