Os05g0276100

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Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0276100| Description = Similar to Na+/H+ exchangeing protein-like (Cation/H+ exchanger)| Version = NM_001061611.1 GI:115462952 GeneID:433827...")
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Gene Name

Os05g0276100

Description

Similar to Na+/H+ exchangeing protein-like (Cation/H+ exchanger)

Version

NM_001061611.1 GI:115462952 GeneID:4338277

Length

2849 bp

Definition

Oryza sativa Japonica Group Os05g0276100, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11346123..11348971

Sequence Coding Region

11346273..11346467,11346587..11348764

Expression

GEO Profiles:Os05g0276100

Genome Context

<gbrowseImage1> name=NC_008398:11346123..11348971 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:11346123..11348971 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctgaggcggcggcggcggccttgaagccgatgaaggcaacgtcggacggcgtgttccagggggaggaccccctggaagcggccctgcctctggccatcgtgcagatttgcatcgtcgtcgtgctcacccgcgtgctcgccttcttcctccgcccgctccggcagccgcgcgtcatcgcggagatcatcggcggcatcatgctcggcccgtccgcgatcggccggaacagcgcgttcatcaacacggtgttccccaagcagagcctcacggtgctcgacaccctcgccaacatcggcctcctcttcttcctcttcctcgtcggcctcgagctcgacctccgcgccatccgccgcacgggagctggcgcgctcgccatcgccgtcgccggcatctccctccccttcgtcctcgggatcggcacctccgtcgtcctccagaacaccgtcaaccgcggcgtccccacggggcccttcctcgtcttcatgggcgtcgccctctccatcaccgcgttcccggtgctggcgcgcatcctcgccgagctcaagctgctcaccaccgacctcggccgcatggccatgtccgcggcggccgtgaacgacgtcgccgcgtggatactcctcgcgctcgccatcgcgttgtcgggctccggctcgcctttcgtgtcgctctgggtgctcctcagcggcgtcggcttcgtcctctcgtcgttcttcttcatccggccgctgctctcgtggatggcgcggcgatcccccgagggcgagcccgtgaaggagctatacatatgcacgacgctcaccatcgtgctcgccgccggcttcatcaccgacaccatcggcatccacgcgctgttcggcgccttcatcgtcggcatcatcgtgcccaaggaagggcccttcgctggcgtcctcctggagaaggtggaggacctcatctctggcctcttcctgccgctctacttcgtgtcgagtggcctcaagaccaacgtcctgaccatcaagggcggggactcgtgggggctcctcgtgctcgtcgtcgcgacggcgtgcatcggcaagatcggcggcacagtgctcgcgtcgctcatcgtgcgtgtgccgctccgtgaggcggtgacgctcggggtgctgatgaacaccaaggggctcgtggagctcatcgtgctcaacatcggcaaggaccggcacgtcctcaacgacgagaccttcgccatcctcgtgctcatggcgctcataaacaccttcatcaccacgccgctggtgatggccatctacaagccggcgcggcgcgcccccccgtacaagaaccgcgccgtccagcgcccgaaccccgacgacgagctccgcatgatggtgtgcttccacagcacgcgaaacatccccaccatgatcaacctcatggagtcgtcgcgtgggacgcggcggcgcggcatcaccgtgtacgccatgcacctcgtcgagctctcggagcggtcgtccgccatcaacatggtccacaaggcgcggcgcaacgggatgccgttctggaaccggcggcgcaacggggacggcgaccagctcgtcgtcgcgttcgagacgtaccagcagctgagccacgtgtccattcgcgccatgacggccatctccgacctccacaccatccacgaggacgtggtcaccagcgcgcaccagaagcgcgccgcgctcatcgtgctccccttccacaagctccaccagatggacggccacatggagtccctcggcgacgagtaccagcacatcaaccagcgggtgctccaccacgcgccgtgctccgtcggcatcctcgtcgaccgcggcctcggcggcgccgcgcaggtcgccgccagcgacgtgtcctacaacatcgtcgtcctcttcttcggcggccgggacgaccgcgaggccctctcctacgccacgcgcatggtcgagcacccgggcatcgcactccacgtgatacgcttcgtcccagagtccggcggcggcggcgcgaacgacaaagccgcggcggacgatgcgttcctcgcagagttccgcggcaaagtcgccggcgggaacgactccatccggtacgaggagaggacgtccagagggaaggcggacgtggtggaggcgatcaaggcgatgggtccgaccaacctgttcctcgttggacaggggtcgccgtgcgcgccgctgatggaaccgagcgctgagtgcccggagctcgggccggtggggagctacctggcgatgccggacttctcgacggtggcgtcggtgctggtgatgaagcagtacgacccgacggcggagcactacgaactcgtcgaggaggtcgcggacaccgccgtggacatcgacacaccggggcctcgtagagggtga</cdnaseq>

Protein Sequence

<aaseq>MAPEAAAAALKPMKATSDGVFQGEDPLEAALPLAIVQICIVVVL TRVLAFFLRPLRQPRVIAEIIGGIMLGPSAIGRNSAFINTVFPKQSLTVLDTLANIGL LFFLFLVGLELDLRAIRRTGAGALAIAVAGISLPFVLGIGTSVVLQNTVNRGVPTGPF LVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAIALSGS GSPFVSLWVLLSGVGFVLSSFFFIRPLLSWMARRSPEGEPVKELYICTTLTIVLAAGF ITDTIGIHALFGAFIVGIIVPKEGPFAGVLLEKVEDLISGLFLPLYFVSSGLKTNVLT IKGGDSWGLLVLVVATACIGKIGGTVLASLIVRVPLREAVTLGVLMNTKGLVELIVLN IGKDRHVLNDETFAILVLMALINTFITTPLVMAIYKPARRAPPYKNRAVQRPNPDDEL RMMVCFHSTRNIPTMINLMESSRGTRRRGITVYAMHLVELSERSSAINMVHKARRNGM PFWNRRRNGDGDQLVVAFETYQQLSHVSIRAMTAISDLHTIHEDVVTSAHQKRAALIV LPFHKLHQMDGHMESLGDEYQHINQRVLHHAPCSVGILVDRGLGGAAQVAASDVSYNI VVLFFGGRDDREALSYATRMVEHPGIALHVIRFVPESGGGGANDKAAADDAFLAEFRG KVAGGNDSIRYEERTSRGKADVVEAIKAMGPTNLFLVGQGSPCAPLMEPSAECPELGP VGSYLAMPDFSTVASVLVMKQYDPTAEHYELVEEVADTAVDIDTPGPRRG</aaseq>

Gene Sequence

<dnaseqindica>151..345#465..2642#gtctttctgctggccaccaccctccccgtcttccttggagataggtggcaggtggctagagagggatcaagggtaggagggagaggaacggatcgcgcgcgcgcgacacgtacaccacacacatccactcacggcacggtacggccggccatggctcctgaggcggcggcggcggccttgaagccgatgaaggcaacgtcggacggcgtgttccagggggaggaccccctggaagcggccctgcctctggccatcgtgcagatttgcatcgtcgtcgtgctcacccgcgtgctcgccttcttcctccgcccgctccggcagccgcgcgtcatcgcggagatcatcgtacgtcggttcttgtgaataattctggtcgctttcgatcgatcgatgtgttcgtggaagctaggttttgattggtttctcgtggggtttggtttgatctgatggtatggagagttcagggcggcatcatgctcggcccgtccgcgatcggccggaacagcgcgttcatcaacacggtgttccccaagcagagcctcacggtgctcgacaccctcgccaacatcggcctcctcttcttcctcttcctcgtcggcctcgagctcgacctccgcgccatccgccgcacgggagctggcgcgctcgccatcgccgtcgccggcatctccctccccttcgtcctcgggatcggcacctccgtcgtcctccagaacaccgtcaaccgcggcgtccccacggggcccttcctcgtcttcatgggcgtcgccctctccatcaccgcgttcccggtgctggcgcgcatcctcgccgagctcaagctgctcaccaccgacctcggccgcatggccatgtccgcggcggccgtgaacgacgtcgccgcgtggatactcctcgcgctcgccatcgcgttgtcgggctccggctcgcctttcgtgtcgctctgggtgctcctcagcggcgtcggcttcgtcctctcgtcgttcttcttcatccggccgctgctctcgtggatggcgcggcgatcccccgagggcgagcccgtgaaggagctatacatatgcacgacgctcaccatcgtgctcgccgccggcttcatcaccgacaccatcggcatccacgcgctgttcggcgccttcatcgtcggcatcatcgtgcccaaggaagggcccttcgctggcgtcctcctggagaaggtggaggacctcatctctggcctcttcctgccgctctacttcgtgtcgagtggcctcaagaccaacgtcctgaccatcaagggcggggactcgtgggggctcctcgtgctcgtcgtcgcgacggcgtgcatcggcaagatcggcggcacagtgctcgcgtcgctcatcgtgcgtgtgccgctccgtgaggcggtgacgctcggggtgctgatgaacaccaaggggctcgtggagctcatcgtgctcaacatcggcaaggaccggcacgtcctcaacgacgagaccttcgccatcctcgtgctcatggcgctcataaacaccttcatcaccacgccgctggtgatggccatctacaagccggcgcggcgcgcccccccgtacaagaaccgcgccgtccagcgcccgaaccccgacgacgagctccgcatgatggtgtgcttccacagcacgcgaaacatccccaccatgatcaacctcatggagtcgtcgcgtgggacgcggcggcgcggcatcaccgtgtacgccatgcacctcgtcgagctctcggagcggtcgtccgccatcaacatggtccacaaggcgcggcgcaacgggatgccgttctggaaccggcggcgcaacggggacggcgaccagctcgtcgtcgcgttcgagacgtaccagcagctgagccacgtgtccattcgcgccatgacggccatctccgacctccacaccatccacgaggacgtggtcaccagcgcgcaccagaagcgcgccgcgctcatcgtgctccccttccacaagctccaccagatggacggccacatggagtccctcggcgacgagtaccagcacatcaaccagcgggtgctccaccacgcgccgtgctccgtcggcatcctcgtcgaccgcggcctcggcggcgccgcgcaggtcgccgccagcgacgtgtcctacaacatcgtcgtcctcttcttcggcggccgggacgaccgcgaggccctctcctacgccacgcgcatggtcgagcacccgggcatcgcactccacgtgatacgcttcgtcccagagtccggcggcggcggcgcgaacgacaaagccgcggcggacgatgcgttcctcgcagagttccgcggcaaagtcgccggcgggaacgactccatccggtacgaggagaggacgtccagagggaaggcggacgtggtggaggcgatcaaggcgatgggtccgaccaacctgttcctcgttggacaggggtcgccgtgcgcgccgctgatggaaccgagcgctgagtgcccggagctcgggccggtggggagctacctggcgatgccggacttctcgacggtggcgtcggtgctggtgatgaagcagtacgacccgacggcggagcactacgaactcgtcgaggaggtcgcggacaccgccgtggacatcgacacaccggggcctcgtagagggtgatgcccttagtcgtaagtcgtaattaacaggcatatacttctactaatacaaattgtgtaatatgatagtgcaatttaattgtagacgtattttcatccctcaggaggatggaccttgatcctccaatgtgtttttacatctgttgtacacttgtaaaatacaatagttctggaattttatgaaagcacttgacacaatatagtgtat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0276100, RefSeq:Os05g0276100

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os05g0276100&oldid=13649"