Os05g0283000

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Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0283000| Description = Conserved hypothetical protein| Version = NM_001187391.1 GI:297723912 GeneID:9267909| Length = 3436 bp| Definition ...")
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Gene Name

Os05g0283000

Description

Conserved hypothetical protein

Version

NM_001187391.1 GI:297723912 GeneID:9267909

Length

3436 bp

Definition

Oryza sativa Japonica Group Os05g0283000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12070306..12073741

Sequence Coding Region

12072970..12073590

Expression

GEO Profiles:Os05g0283000

Genome Context

<gbrowseImage1> name=NC_008398:12070306..12073741 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:12070306..12073741 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccatattgtgccattgcattgttcttttcagtttttgctttgttgaattttgtgttgcatcgtcacgtcgtgttgctggtcttagcgtctagttcgtttagagtttcgagttctggtcacgttttgtaccacagtcgtcgctgccaccgtgtctctgttgttgtcgggacctacgaaaatggaatcggctcgctgccacggttctatttttgtagttttcagaagtttctatcggttagttttggagttcttgagttgtatctagagtttgccgatccttgtgtgtgtttgttttggccgtgcctgtgtcgtgcacgagaggaggaaggtgaattaccatatctgattttggaagtagtcaagtttgttttggaaagatatagtagattggattggttaaaaatcagtttcctttttatcccatacaccaaattcggctgccatccactccacctcctggccgagtcccactcgcccctttggccgagtccgactccctccctctcttccaccgttccgagttgtgtcaaacaccttggcgaatttttgtttggtgtcggtttcgagatctgtttggaaaaacggaaccggcataaattcagcattctattttttgtataa</cdnaseq>

Protein Sequence

<aaseq>PYCAIALFFSVFALLNFVLHRHVVLLVLASSSFRVSSSGHVLYH SRRCHRVSVVVGTYENGIGSLPRFYFCSFQKFLSVSFGVLELYLEFADPCVCLFWPCL CRAREEEGELPYLILEVVKFVLERYSRLDWLKISFLFIPYTKFGCHPLHLLAESHSPL WPSPTPSLSSTVPSCVKHLGEFLFGVGFEICLEKRNRHKFSILFFV</aaseq>

Gene Sequence

<dnaseqindica>2665..3285#atccattcctaaaccgaagaaaccaaccgaagaaaccgagaaggagagctccatctcccttttccttctcaacctcgccgccgaccgtgaagacgacgaccgcctccagcgccattacgctgcggtcgtttcctcttatcttgtgttccattatcacctctccacgccgactccatccctctaagtttcatcccctttcatgcagtggtttggtgggaacgcaaacctcgccgacgatactctggagcacgcaccgggtgccgccgtggcggcatcgtcgccgttgccatcgatctagaccaagccggagcgagccaccacgccaccagcttcacctcgagcgcctctccatttacccccaagaaacccatccaatggcgcagcgatcttggagatcgacatcgtcttctccaactccgttcaaccgcttccatcatcgaatccattctctctggtgagcatcagtcaaattccatgcatgcatggcctccctagatagcctttgacctcttgcatgcaccttattggtgactccccttacagaccgagcagccgacgtcatccctggagttgtgccatgccgccatggagcttcgccgtcactgtggctctgcagacacccccagccttgtctagcatctcggtgagcaccctgcagcctatagaacatacatgcatgcacccaattaaccaatacatgattgtagaagcacatgcaccaccacccgaaaacatcctctactcggactcgccgctggcgctactccgatgtcccctaaccaagaaatctagaggattggaatcgcaagaacatgctcgttcattttatcttttaaccccaactccaaccgagccaccaatcgcccccggtgagcccgggatcgagctcagccatggctgctctgtccctatgcgtgtgaaaaagaagtcagggacctagttttgagaatttaaacaactataaggttcaatgtgtaatgtttccactcaatgacatatggacctaggactgcggcttgatttcctgaaaccctagaggcctttctgcatattggcctgagactaatctgtggacccaatctatttaaattctggaaaaatctaaatgaaatgcctaaagctttatattttcatcagaaaaacatgtaaatttgtaaattccataacaaattgaaaacaactcattttagagtaattcaaattactgttaactcgtcaaatcatgaactttagtgttattgcataaaaacttgcactcacagtacaatttctgtctctaaaattcatctaagaaaaatcacatataaaacatgcacaggattataaatgcatacaaaattcatttcaactcattttagagcaaacatagtttctacatatccaccaaaatgttctctaaaaacaaagtaaaataaaacatatacacactttacatcaaatgcctctaaaactaatatctttaaaataactagttctgcataagctgaactttagaagttaatataaaattcatcttagatcctttttgagtaaactcaagttctgtagaatcataaagttgtgcacttcaatgttataaaataaaaagacatacttacagtataataaaaacccctaagcatttatgtaaggaataagcaacatggcgcataccttaaattgtaaaatttgtagaaaattcatctatagtctaaatgaagtgaaccaaatttctatacaaccagcaagtaatatacttcaacctagtagagtgaattatagcaccctctatgcagactatatgatgtgaccatggctaccacggatgcaaccattgctcacatcatggatgaacaagaagatatcgagatcaagtactccaagtgctggaatccgattcggccacctactacactgctgacttcaaacagccaccaaatctgcatacgacctccgttttcggcccgtgagtacttgatggaaagctctcggagccctctttctaacggatccagcctcttctctgaattctatctcgtgtggccagaatcacaggaacaaggtgttgcatcacctataatgggcctatgggcttgtaacttcatttgggaccccggcccaggtggggcccatgtggggtgcgccccaagctggtggagcacgaccctaggcacccctaggtcgtcctcccacccctatatatagctagttaccccttcagggtttctcgggtttttgttagattaaagtttagccattgctacttgcttgcagcgcgcgtgtcggctagaccgtccgtctgcttgttcttcggaaccccaacttatcatttgtattaaattcctatttgcaatatcagattgctttattcttgttcttgcttgtttcttcgatttgcttgcaggaatagggttgatctgcaccggcaagatcaacaacctacggagaggtgtatcgatcgctaaggcgcaacacaacgtctcgtacggttgtagtcggatcgtcaacgtttctcccaaatcgtagttatcacaactcaccgaaagatcgggccaacaacagccttgagtgttgagaggaactcagggttcatcaggtggtatcagagctttcgttgctcggtgagtttttatcttcctataaccagaaaatagccatacaaaaaaattcgtatcatttacctagccatattgtgccattgcattgttcttttcagtttttgctttgttgaattttgtgttgcatcgtcacgtcgtgttgctggtcttagcgtctagttcgtttagagtttcgagttctggtcacgttttgtaccacagtcgtcgctgccaccgtgtctctgttgttgtcgggacctacgaaaatggaatcggctcgctgccacggttctatttttgtagttttcagaagtttctatcggttagttttggagttcttgagttgtatctagagtttgccgatccttgtgtgtgtttgttttggccgtgcctgtgtcgtgcacgagaggaggaaggtgaattaccatatctgattttggaagtagtcaagtttgttttggaaagatatagtagattggattggttaaaaatcagtttcctttttatcccatacaccaaattcggctgccatccactccacctcctggccgagtcccactcgcccctttggccgagtccgactccctccctctcttccaccgttccgagttgtgtcaaacaccttggcgaatttttgtttggtgtcggtttcgagatctgtttggaaaaacggaaccggcataaattcagcattctattttttgtataattttaattttgggtttagacttttacatttgagtccctataaattttatatttatgtttgagtccctgtaatcttacattaaggtccttgagtcagtttttgttaaaaaaaataagaaaaaaaagtgagaaaaaaaaaggcagaaaggtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0283000, RefSeq:Os05g0283000