Os05g0286200

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Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0286200| Description = Conserved hypothetical protein| Version = NM_001187393.1 GI:297723916 GeneID:9266397| Length = 2845 bp| Definition ...")
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Gene Name

Os05g0286200

Description

Conserved hypothetical protein

Version

NM_001187393.1 GI:297723916 GeneID:9266397

Length

2845 bp

Definition

Oryza sativa Japonica Group Os05g0286200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12335907..12338751

Sequence Coding Region

12335909..12336157,12336232..12336413,12337189..12337210

Expression

GEO Profiles:Os05g0286200

Genome Context

<gbrowseImage1> name=NC_008398:12335907..12338751 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:12335907..12338751 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttcactgcttgttctatcttttcttcatcaagctgagctctcatctcactcctcctccccaaatcacatccaatagcccaagatcaattcctgcatgtttgaccacaacaattcccatcatccaagctttccatccatcccaacatcttgcacatgcatggagagttgagagagatcgagaaggaataaaagagtgctggtttcagcctacagggctgcagcagcagcattttgttttcctccatttggttgtccactccattgctgcagctagaaggtggctgcaactcaccccgagttcatctcttttgatttcggttgaagcagccctaggcaacgtctcttgccgtcagcccaagaccttgctccatctcttgccatcagcccaaggccttagcctcgcacaaccctacgtccaggttgctgccatatttggagattccggagagtaa</cdnaseq>

Protein Sequence

<aaseq>LHCLFYLFFIKLSSHLTPPPQITSNSPRSIPACLTTTIPIIQAF HPSQHLAHAWRVERDREGIKECWFQPTGLQQQHFVFLHLVVHSIAAARRWLQLTPSSS LLISVEAALGNVSCRQPKTLLHLLPSAQGLSLAQPYVQVAAIFGDSGE</aaseq>

Gene Sequence

<dnaseqindica>3..251#326..507#1283..1304#atcttcactgcttgttctatcttttcttcatcaagctgagctctcatctcactcctcctccccaaatcacatccaatagcccaagatcaattcctgcatgtttgaccacaacaattcccatcatccaagctttccatccatcccaacatcttgcacatgcatggagagttgagagagatcgagaaggaataaaagagtgctggtttcagcctacagggctgcagcagcagcattttgttttcctccatttggtgagcttccttttcatccatggtgcctcttttgaattccctccatgttgaacatccatagcaacgttctataggttgtccactccattgctgcagctagaaggtggctgcaactcaccccgagttcatctcttttgatttcggttgaagcagccctaggcaacgtctcttgccgtcagcccaagaccttgctccatctcttgccatcagcccaaggccttagcctcgcacaaccctacgtccaggttgctgccatgtgagtgaagtccggtggaagttggagaaaaggggagtgaaaatagaaatcgatttctgagatagctattgagctgaaagaggtgtgcgctttaaaaattcataactaattcatatgaactccgaattcagtgaaccaaatttctgtggattaagaaaaacgtgatcttcaacgttgtaaaataaaaatgaccaacttttgtactggttttcccagtaaaaatataaatagctatatgtatcccttgtgtggtatagctcttaataaattcgtaagaaattattggtaaaagctaaatttgtgaaaccaattttgttgagcttatattttagtactctttgctgttgtggtgttgtttttggcaaaactacctcttaaatcttgtttaggagttgtttagcattcccatgattttaacttgtaaaatccataaataaataatggcaacatatatagctatgaaataatttttcttaggacatgtgaaagatgtactttactctaaaaataatcattattatgaaaacttggtttgagttataggttgcttgcaatgctgtaaaggaaacattaatatttacagaaatgccattttcagcacctgagagcttgtcattttcatatctcccaaaccataagtgataatccggtgattctttcacctaaattcaagttaaaatatgatctacccactgtatttatttcataatttattgatcattttgcatgtacatgtttatttggctcttattcgcatattgcttcttttcgatagatttggagattccggagagtaatgagccatatccagaggaggatagtgacttccctcagcagcaaggcaagcacctaagcatatagaacctatgctttctctaaaaatgatttggttgcaatctatacatatatatatgtgcatgcattgcctagatattaatattgtcggtttatggtgtatgggaagaaactatttatgcatttagttcttgtaatattgatgtccttataacctattaccactggatgggattacttgggatatcttattcattaatgcttagccatgcttagtgctaatagaactatagggatggacattgctattaattgtggtacatagacaacttgctttattgggcataaaacttgagtacttacactaaataatggttgatgaaatatgttggacttggacgggtgatagggcgatgaaaggaggttggttttcgtctgatgcaagtagccccgtctgagtcattaaggatcgaacattttgacatctattcaagcacccttcatacttaccacatgccttatttgggaccagcttgtcctttactagttctactatcattatttataccacattggagagacgtgagagcaggtagccctttggagggcctcgggtgcctatgttggccgggggtgcctcccccgtggcccgcccgccttggtcacatcacgcacgcacgtgactgagtcgtcgggaaccccagcgtggtataggtggttggggtggggttaagaaagggcatgtaatgagcttgaatcacttgtgtaccgcacttgacagggtgtgtagcatttgatctttgttcatttcgtgtgggtccagttgtacacctctgatcagagtataacctattcgaatagccgcgtccttggttatggacattgcttgatgtgtatctcactcatgttagcatcaaatgtagattattatggatgggattatgtttgatggtggtgttggcatgttgtgccatgttggtatggactttggtggaccatggttgatgatgagagcgccgtttgggcttatttgcttatacatttcagaattatatacttgctgtccataaattaaaatgatgctagacttacttttccttgcttattttactcataattgctcaataaaattagctttatgcaaatgttgaacctagagacccaccataggctagaaagcttgcatacttctttctcccttatgtatatataattttgggtaagacttgcgagtacaatcttgtacttaacccggtgtctgcaatttcaggagaggaatccggttttgagttatgcttcttgtgtggtcagtgctctgccaagggtggtgagggcaatgagtgatctcttgcagcttggctcttgcccggttggtttgccctagtggggttgtggcaccaccgattttatcttttgcttatgaactctatttgagacttccgctgctatatttatgtgttgtatgttgggacctcggaccctattatgtgtcatgtacctcgctgcactttaaccctattatggtatttgctatgtttattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0286200, RefSeq:Os05g0286200