Os05g0485000
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0485000 |
|---|---|
| Description |
Sodium/hydrogen exchanger family protein |
| Version |
NM_001062407.1 GI:115464544 GeneID:4339137 |
| Length |
3074 bp |
| Definition |
Oryza sativa Japonica Group Os05g0485000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:23886569..23889642 |
| Sequence Coding Region |
23886868..23889189,23889287..23889589 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:23886569..23889642 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:23886569..23889642 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccccgatcatgagtggggcggcggcggcggcggggggcacgggcggcgcggtcccgctcatcaagaacgccacctccgcgtcccagatgtcgcgtggcaaggccggcaccggcgccggcgcggtcgtctgctactccccgatgatggtcaccgcctacggcatctggcagggcgcctcccctcttgacttctccctccccctcttcctcctccaggtcgccatcatcgtcgccaccacccgcctcctcgtcatcctcctcaagcccttccgccagcctcgcgtcatcgcggagatcctcgctggcgtgatactggggccgtcggtgatggggcaggtttcgacgtgggcggtgaaagtgttcccggagcggagcttgctgacgctggagacggtggcgcacctggggctcctctacttcctcttcctggtcggcctcgagatggacgtgaacaccatcaggaggtcggggaagaaggcgctcatcatcgccgtcgccggcatggcgctgccgttctgcatcggcacggcgacgtcgttcatcttccggcaccaggtgtccaagaacgtgcaccaggcctccttcctgctcttcctcggcgtcgcgctctccgtcaccgcgttcccggtgctggcgcgcatcctcgccgaggtcaagctgctcaactccgacctcggccggatcgccatgtccgccgccatcgtcaacgacatgtgcgcctggatcctcctcgcgctcgccatcgccatctcagaggtcaacagttcggccttctcctccctctgggtgctcatcgccggggtggccttcgtgctcgcctgcttctacgtcgtccgcccgctcatgtggtggatcgtccgccgcgtccccgagggggaggccatcggcgacgtgcacatcacgctcatcctcaccggcgtcatggtcgccggcgtctgcaccgacgccatcggcatccactccgtgttcggcgcgttcgtgtacggcctcgtcatgccgagcggcccgctcggcgtcgtgctaatcgagaagctcgaggacttcgtcaccggcctcctcctgccgctcttcttcgccatcagtggcctccgcacgaacgtgaccaaggtccgggaccccatcaccgtgggcctcctcgtgctcgtgttcgtcatggccagcttcgccaagatcatgggcaccatcctcatcgccgtctcctacaccatgacgttccgcgacggcgtcgccctggggttcctcatgaacaccaggggcctcgtcgagatgatcgtcctcaacatcgggagggacaaggaggtgctcgacgacgagtcgttcgccgtgatggtgctggtgtcggtggccatgacggcgctggtcacgccggtggtgacgacggtgtaccggccggcgcggcggctggtcgggtacaagcggcggaacctgcagcggtcgaagcacgacgcggagctccggatgctggcgtgcgtgcacaccacccgcaacgtgccgtcgatcatctcgctgctcgagctctccaacccgacgaagcgctcgccgatcttcatctacgcgctccacctcgtcgagctcaccggccgcgcctccaacatgctcgccgcgcaccactcggcgtcgaacccgggcggcgccagcgaccacatcttcaacgcgttcgagagctacgaggagatggtcggcggcgtgtcggtgcaggcgctcacggcggtgtcgccgtaccagacgatgcacgaggacgtgtgcgtgctggcggaggacaagcacgtctcgctcatcgtgctcccgttccacaagcagcagacggtggacggcggcatggagcccatcaacgcgtcgctccggggcttcaacgagagcatcctcgcgtcggcgccgtgctccgtcggcatcctcgtcgaccgcggcctcagcgccgccgcggcgaggatggcggccgtgcaccacgtcgcgctcctcttcttcggcgggcccgacgaccgggaggggctcgcgtacgcgtggcggatggtcgaaaacccgggcgtgtgcctcaccatcgtccgcttaatcccgccggggtacacggcgccggcgatctcgccgccgcagccgccgatgcccgccgcccactcccgcgccatcaacgtcgtccccgaggtcgccaagagcgagcggcagatggacgaggagtacctcaacgagttccggtcgcgcaacctcggcaacgacgccatcctctacgtcgagcaggtggtggccaacagcgaggagacggtcgccgccatccgcagccagctggacaacgcgcacgagctgtacatcgtcggccgccaccccggcgaggcgagctcgccgctgacgtcggcgctcgccgagtggatggagtcgccggagctcggccccatcggcgacctcctcgtctcctccgagttctccaagatggcgtccgtgctggtcatgcagcagtacgtcatcacggcgccgctgccgccgccggtggcgctcgccgggccgccgacggatgaccccgtccggcagtatttgaccaacgccaaccagcggccgtcggtggcgatcggcggcaaccagatgggcgccgccggccgaggcggatggagcggcggcgccggcgggtactga</cdnaseq> |
| Protein Sequence |
<aaseq>MAPIMSGAAAAAGGTGGAVPLIKNATSASQMSRGKAGTGAGAVV CYSPMMVTAYGIWQGASPLDFSLPLFLLQVAIIVATTRLLVILLKPFRQPRVIAEILA GVILGPSVMGQVSTWAVKVFPERSLLTLETVAHLGLLYFLFLVGLEMDVNTIRRSGKK ALIIAVAGMALPFCIGTATSFIFRHQVSKNVHQASFLLFLGVALSVTAFPVLARILAE VKLLNSDLGRIAMSAAIVNDMCAWILLALAIAISEVNSSAFSSLWVLIAGVAFVLACF YVVRPLMWWIVRRVPEGEAIGDVHITLILTGVMVAGVCTDAIGIHSVFGAFVYGLVMP SGPLGVVLIEKLEDFVTGLLLPLFFAISGLRTNVTKVRDPITVGLLVLVFVMASFAKI MGTILIAVSYTMTFRDGVALGFLMNTRGLVEMIVLNIGRDKEVLDDESFAVMVLVSVA MTALVTPVVTTVYRPARRLVGYKRRNLQRSKHDAELRMLACVHTTRNVPSIISLLELS NPTKRSPIFIYALHLVELTGRASNMLAAHHSASNPGGASDHIFNAFESYEEMVGGVSV QALTAVSPYQTMHEDVCVLAEDKHVSLIVLPFHKQQTVDGGMEPINASLRGFNESILA SAPCSVGILVDRGLSAAAARMAAVHHVALLFFGGPDDREGLAYAWRMVENPGVCLTIV RLIPPGYTAPAISPPQPPMPAAHSRAINVVPEVAKSERQMDEEYLNEFRSRNLGNDAI LYVEQVVANSEETVAAIRSQLDNAHELYIVGRHPGEASSPLTSALAEWMESPELGPIG DLLVSSEFSKMASVLVMQQYVITAPLPPPVALAGPPTDDPVRQYLTNANQRPSVAIGG NQMGAAGRGGWSGGAGGY</aaseq> |
| Gene Sequence |
<dnaseqindica>454..2775#54..356#agcttatactctctctctctctctctctctcgtcgacgcgccgatgcgccgagatggccccgatcatgagtggggcggcggcggcggcggggggcacgggcggcgcggtcccgctcatcaagaacgccacctccgcgtcccagatgtcgcgtggcaaggccggcaccggcgccggcgcggtcgtctgctactccccgatgatggtcaccgcctacggcatctggcagggcgcctcccctcttgacttctccctccccctcttcctcctccaggtcgccatcatcgtcgccaccacccgcctcctcgtcatcctcctcaagcccttccgccagcctcgcgtcatcgcggagatcctcgtacgtcgcccgccaccttcgccgccgccattgttctattctcattggtcgattggttaactgtgtcgccgccgtcgtcgtcgtggtggtgatgcaggctggcgtgatactggggccgtcggtgatggggcaggtttcgacgtgggcggtgaaagtgttcccggagcggagcttgctgacgctggagacggtggcgcacctggggctcctctacttcctcttcctggtcggcctcgagatggacgtgaacaccatcaggaggtcggggaagaaggcgctcatcatcgccgtcgccggcatggcgctgccgttctgcatcggcacggcgacgtcgttcatcttccggcaccaggtgtccaagaacgtgcaccaggcctccttcctgctcttcctcggcgtcgcgctctccgtcaccgcgttcccggtgctggcgcgcatcctcgccgaggtcaagctgctcaactccgacctcggccggatcgccatgtccgccgccatcgtcaacgacatgtgcgcctggatcctcctcgcgctcgccatcgccatctcagaggtcaacagttcggccttctcctccctctgggtgctcatcgccggggtggccttcgtgctcgcctgcttctacgtcgtccgcccgctcatgtggtggatcgtccgccgcgtccccgagggggaggccatcggcgacgtgcacatcacgctcatcctcaccggcgtcatggtcgccggcgtctgcaccgacgccatcggcatccactccgtgttcggcgcgttcgtgtacggcctcgtcatgccgagcggcccgctcggcgtcgtgctaatcgagaagctcgaggacttcgtcaccggcctcctcctgccgctcttcttcgccatcagtggcctccgcacgaacgtgaccaaggtccgggaccccatcaccgtgggcctcctcgtgctcgtgttcgtcatggccagcttcgccaagatcatgggcaccatcctcatcgccgtctcctacaccatgacgttccgcgacggcgtcgccctggggttcctcatgaacaccaggggcctcgtcgagatgatcgtcctcaacatcgggagggacaaggaggtgctcgacgacgagtcgttcgccgtgatggtgctggtgtcggtggccatgacggcgctggtcacgccggtggtgacgacggtgtaccggccggcgcggcggctggtcgggtacaagcggcggaacctgcagcggtcgaagcacgacgcggagctccggatgctggcgtgcgtgcacaccacccgcaacgtgccgtcgatcatctcgctgctcgagctctccaacccgacgaagcgctcgccgatcttcatctacgcgctccacctcgtcgagctcaccggccgcgcctccaacatgctcgccgcgcaccactcggcgtcgaacccgggcggcgccagcgaccacatcttcaacgcgttcgagagctacgaggagatggtcggcggcgtgtcggtgcaggcgctcacggcggtgtcgccgtaccagacgatgcacgaggacgtgtgcgtgctggcggaggacaagcacgtctcgctcatcgtgctcccgttccacaagcagcagacggtggacggcggcatggagcccatcaacgcgtcgctccggggcttcaacgagagcatcctcgcgtcggcgccgtgctccgtcggcatcctcgtcgaccgcggcctcagcgccgccgcggcgaggatggcggccgtgcaccacgtcgcgctcctcttcttcggcgggcccgacgaccgggaggggctcgcgtacgcgtggcggatggtcgaaaacccgggcgtgtgcctcaccatcgtccgcttaatcccgccggggtacacggcgccggcgatctcgccgccgcagccgccgatgcccgccgcccactcccgcgccatcaacgtcgtccccgaggtcgccaagagcgagcggcagatggacgaggagtacctcaacgagttccggtcgcgcaacctcggcaacgacgccatcctctacgtcgagcaggtggtggccaacagcgaggagacggtcgccgccatccgcagccagctggacaacgcgcacgagctgtacatcgtcggccgccaccccggcgaggcgagctcgccgctgacgtcggcgctcgccgagtggatggagtcgccggagctcggccccatcggcgacctcctcgtctcctccgagttctccaagatggcgtccgtgctggtcatgcagcagtacgtcatcacggcgccgctgccgccgccggtggcgctcgccgggccgccgacggatgaccccgtccggcagtatttgaccaacgccaaccagcggccgtcggtggcgatcggcggcaaccagatgggcgccgccggccgaggcggatggagcggcggcgccggcgggtactgaccggactccgatccgatcgagcgcttcgctgtaatcgccgtcagttaatcgctcgattggtagtagtagggtttcgaagcttaattatttttaggaattaattatgattgttaattaatttttgttgtgtagtacggagtacaattctaggtgattgtttttgtagatgtcgtgtttaattggtcagattctgtgatcgatccctcctgtagtgtgagaggtgatcgattacatgtactactacgtgttttaactcttctaggttcttaactaattgttcttagagatgtttcatatgc</dnaseqindica> |
| External Link(s) |
