Os05g0508700
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os05g0508700 |
|---|---|
| Description |
TRAF-like domain containing protein |
| Version |
NM_001062532.1 GI:115464794 GeneID:4339268 |
| Length |
8387 bp |
| Definition |
Oryza sativa Japonica Group Os05g0508700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:25237886..25246272 |
| Sequence Coding Region |
25238537..25238714,25240310..25240421,25241181..25241269,25241348..25241416,25241500..25241629 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:25237886..25246272 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:25237886..25246272 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcttgtgctgcagcaactgatgattctgctgcgagcacggctgggatgagggacgaggatcgtagcctgtctggcgagtcgttgtccgagtggcggtcctgcgagcaggtggagagcgagagcccttcgacgtccccgcccttttgggacactgacggtgatgacgatgatcctggccccaaaccttcagatttatttgggcggtatacttggagaattgaaaatttttcaaaggagaagaagagagaaatgaaaagcgagccatttgaagctggtggttacaaatggtatattcttgtataccctcaaggatgtgatgtttccaaccacctatcactttttctctgtgttgctaatcatgacaaacttctcccagggtggagtcattttgcgcagttcactatagctgtaggcaatatagatcctaagaaagtaaaatactccgatactttgcataagttctggaagaaggagcatgattggggatggaaaaaatttatggagttgtcgaagattcaggatggctttcttgttgatgatgttcttgaaatcatagctcaagttcaagttatcagggagaaggtggacaaaccatttcgttgcctcgatcgcccttatcgaagagaattgctccgtgtttatacgacaaacatcgagtcaatataccgccgttttgttgaggaacgaagaaataaacttagcaagctgattgaggacaaaatgagatggtccagtttttgtgctttctggtcagcaattgacccaagtactaggcatcggatgtctagagagaagactgatgtcatattaaaagtattagtgaagcatttttttgtggagaaagaggttacttcaacattagtgatggattctctgtatacgggcctgaaggtgcttgaataccagagcaagggcaagaaagggagaacgatagctgatttggatgaactgcctgcacccatgatccatgttgacatggacatgtttgttttggccagtgatgttatagatttgcttgagagagcagccttagaaccactgccttgtcaacctgtgtctccaaaggatgacaaatgttcccagagtcgcatgaaggatggtgcttctggtgaggttaacaaaatttccatggagcgcgaggaaagacgcctaactgagcttggtcggaagatacttgaaacatttgtgctatctcatatattcagtggaattgaagttgcgtaccaagaagctgttgctttgaagagacaagaagagttaattcgagaggaggaggaagaggcatggcttcttggaaatgagatgaaggggaagcgtgggggtggtgctaatgaaaaagataagcgtgcaaagaagaaacaggccaaacaaaagaagaacaatcgtaagattaaagacaaggaaagagacgaaaaatttgaagcaaagattctggaaagacttcatgatgaaactgcgattgatgatagtgatggcttatcatcaaagcaggccgaagaagtgacaacaaaggttgaaaacttggaagaaggtgcttcagataggcaaggtgatctagatagttcagaaattgctcaccgaccagactcaggtgacaagtatcctagacaaatgaatggactgagtgatgttactggcaatgcacaaaaggtaaagaaggcctcctctatggaggctaactcaccagtctttctggctgattctgttgctgcaagcggcactcatagcagaggaaataatttgtcagacagtaagaaccgcatgacaccaaatagagggaaaaatcagcgtaacaagggcataagcattatcagcttttctgaggaaggtgagggtattccctcgagttctactggtggttcggctcgttgtagttctagttgcggcacatctgcaaagttggaccaagataccgttctactcaccttgaaggataaactccgtaagctggggcaacgtctacatgagaaaaatatggaggggcgaaaacttctccaagctcattttgaagccatggaagcaaagacgagtggttcatctccctcatccagtcctttggatgaaacacctgatgttgtgaagagccctgagcagtctgcagaaggtacaacagatgcaaaagctaatggaacaccaaataaggatgaacccgtgacaaattgcgtggcagaggaatctgtttcagtcatgccaggcacaaagagtactgaagctttatctggcatggcccttgccaagacaaaagttgagccagtttcaaataaagatcatgttccaaaaccaacattgcaagccaatagagcatctgct</cdnaseq> |
| Protein Sequence |
<aaseq>MACAAATDDSAASTAGMRDEDRSLSGESLSEWRSCEQVESESPS TSPPFWDTDGDDDDPGPKPSDLFGRYTWRIENFSKEKKREMKSEPFEAGGYKWYILVY PQGCDVSNHLSLFLCVANHDKLLPGWSHFAQFTIAVGNIDPKKVKYSDTLHKFWKKEH DWGWKKFMELSKIQDGFLVDDVLEIIAQVQVIREKVDKPFRCLDRPYRRELLRVYTTN IESIYRRFVEERRNKLSKLIEDKMRWSSFCAFWSAIDPSTRHRMSREKTDVILKVLVK HFFVEKEVTSTLVMDSLYTGLKVLEYQSKGKKGRTIADLDELPAPMIHVDMDMFVLAS DVIDLLERAALEPLPCQPVSPKDDKCSQSRMKDGASGEVNKISMEREERRLTELGRKI LETFVLSHIFSGIEVAYQEAVALKRQEELIREEEEEAWLLGNEMKGKRGGGANEKDKR AKKKQAKQKKNNRKIKDKERDEKFEAKILERLHDETAIDDSDGLSSKQAEEVTTKVEN LEEGASDRQGDLDSSEIAHRPDSGDKYPRQMNGLSDVTGNAQKVKKASSMEANSPVFL ADSVAASGTHSRGNNLSDSKNRMTPNRGKNQRNKGISIISFSEEGEGIPSSSTGGSAR CSSSCGTSAKLDQDTVLLTLKDKLRKLGQRLHEKNMEGRKLLQAHFEAMEAKTSGSSP SSSPLDETPDVVKSPEQSAEGTTDAKANGTPNKDEPVTNCVAEESVSVMPGTKSTEAL SGMALAKTKVEPVSNKDHVPKPTLQANRASA</aaseq> |
| Gene Sequence |
<dnaseqindica>652..829#2425..2536#3296..3384#3463..3531#3615..3744#4168..4326#4429..4789#5005..5114#5415..5571#6998..7410#7490..7682#8046..8387#gctgttcgctgcctacaaatcgcaattccccaatccatattcccttcccttcctttcctcctcctccatctccaccctcccgccgccgccgccgccgccgtcgccgcggcacactccccgggaccagcagaggccgccgccaacgccgcgggggcaggtaaaaaggcgcgcgagacgcccgcctctgcccgctgacctagatcggtagggtttactcgggcgcccgggtcgttcgtgtatgggggcgtgggcggtgggggattaggctttcggggtcggggggtcgggaaggtgtctgatcggatgatgggtggctctgttctccttctggggtgcggggttagagctagggctgtcgcggcgattttattttattttattttagttgaatttgaccggaatttccacgatttggatgggtttgtattggttggattgtggtaggagtgtttttataggggggttgggagtgagggggggtagggtttgttaatggtttttgagtgatataatctatttgattcctgttagggtcttctcctgggagatttcccggcgcggattttgttagcatttattaagtgtgcgcgtgttgttgttcatgcatgcagctgcggataaggttgcttgaagcagtggaagatttcctggatggcttgtgctgcagcaactgatgattctgctgcgagcacggctgggatgagggacgaggatcgtagcctgtctggcgagtcgttgtccgagtggcggtcctgcgagcaggtggagagcgagagcccttcgacgtccccgcccttttgggacactgacggtgatgacgatgatcctggtgagtaaatgcacttgcttcgcgttacgcgtgttaataatgactaaattatttggtccgtgtcgttgcaacgccatttgagcttaacatgattggttcggacttggaggaaatagcacaaattctcgagtagttagttgacgtagcacctgtatgcatgatgcgtcttgttcagttgcaagtgttagggtcatctaccttacagctgccagcccagacttcacaaaagatctcgatcagaaactggaaatggtcctcgttgcagagtagcttcagagtccagaagacagtatacacgtgtgctctcataaatgagacggttttgtagccttaatgcatagcgtccagtcaggtcatttatggaaatccgtgaattgtcaactgaagttgcttctggttagcaccctccatttcacaattttaatccagctactctgtactcaagtgtgcgttgaccggagaagcagacaatttaagaaataattaatgagggcaatacttaccccatacgttgctacctccattcccggaacataattaacgagggcaatacttaaatatacaatcttgtttcatccagaattcccggaacattctgtttcttcgaaaaaaaacataatacagtcaataatcctatttcatctgttatgctgttcatgttcgcatttaaattctggctggaatttgcgcttctaggcatttaggtacctgtgcttcaacctgaatagcaggagaatcgcatgctgcaaaccaacattactaattgcacagaaccgcagttcttgtattaatcttgtgaacaactactacacagctaggaggcaacctgcaatatagagaattgtgatatgcagacaatcatgatttcttgtaatgctcctttatcatagcttcgtacttgtttctctatttttaactcgcaccaaaatatgtttgcaaacacagtcatggctagataaatgttgtgtatactccaatatgtacaaaaaagatagctgtatgcctgccggtacatttttaattaaaatcaatcaatctacactggtatggtccatgggtccagtgcaaaatgtttcattccaataggcaaaacggaatgtccaccggaaaagtattgacatgtacgcctaataccatgcttaatatgtgttaatccattatttcttctctttccatgctgccttcaagtgtcatcttgactttcctctacaaactcaaattttgaattaatatttgctctatcaacaaggaatccagattcatttaccatctcttttcacgctacttcacaatgttatttggtctcattgtcattgatgcagtttatgttttgtgtacagtagtaaatatgattagggcatttaaataggtggcatgcttgccgggctgttctcacctgaattacgttcatgctagcgtcaacatttgctattgctgcatgaataagtttaactctctttcctggttcaagtcccaattcctggcatgtctgtttttgaactattttagtatttatagagtaaaatgctcttttttcctttagaagttcttttttctttccctattttaacctcatctctgaactaccattacaggccccaaaccttcagatttatttgggcggtatacttggagaattgaaaatttttcaaaggagaagaagagagaaatgaaaagcgagccatttgaagctggtggttacaaatggtaaaaggcttggtgaccattgctatgcatgatttaccaatgctttgcaatttacctcctatgctatccttttgtctcccaaaataaaattccgcatgatagtttttttcttgaataacctttatcctgtagacattagtacttttttgcaaatatgccttctttttcctcttatgttggtgcctagagaatggtattgtcaattttcatctcaccatgtttcctttccatgcaatgcaatcatatacaaacaccgcataattctgtcttatatgcattttttgacataatgtttgttatgtaggaaatgtaaactcgcacgattttgggcattataaaattgttttctgtgatttcttaattgaaaaaagatctttaacaagttttggataacgatgctgctttctttgccctatgttcgccaccacaatattgtgaactgttaggtttacttttctttattgcagccatttatttcatttagatgattattgggtttgaacactgttatctctgctttagctattatgtaaaaaaaaaaagaaacaactgtaaacatagcatactgcatactggtcaacatgtgatatttatttagggatttggcttacatgaccaccaaatattgtttgcttcaggaatctttgctgagggccataggaacaaatctaagagcttcttgtctctttccagtttaaatttgttatttatatatgcctatttacttattccttactttgtctgcttgctattttacaggtatattcttgtataccctcaaggatgtgatgtttccaaccacctatcactttttctctgtgttgctaatcatgacaaacttctcccaggtttggtttttgtagtctttgctgctatctaatggtgcaccatggacctaatatctcatattagtattacactttcagggtggagtcattttgcgcagttcactatagctgtaggcaatatagatcctaagaaagtaaaatactccggtgagtggaatttggcttgttctcttcctaggaagctaccattcttatcttcttgagcttcaggtcttaagtaaattttgtagatactttgcataagttctggaagaaggagcatgattggggatggaaaaaatttatggagttgtcgaagattcaggatggctttcttgttgatgatgttcttgaaatcatagctcaagttcaagttatcaggtagctaatctgtcagtgcgaacaattggtagctaatctttgtatcatggtgcttccaattcgtgtctacttaatctattaggctggttcatttgagcatgtctgtctttattgcttcatgtcctaatcgcgggaacaatatttttgaattttctacaggtagtctgccaatttatctcaaagcattgtttctttattcaattgcattccttttgattctactgtgatgttcccatggtgggaatttatttaatctattccagtttctcatttttttgctctaatttcctagcgttttgtagctcatacagaccagcaagatcacttgtatacattagatagtttgcctacttctgtttcttgttgatatgaattgactacaaactatcatgtaacatcatactgctgtatttaatatgtaagggagaaggtggacaaaccatttcgttgcctcgatcgcccttatcgaagagaattgctccgtgtttatacgacaaacatcgagtcaatataccgccgttttgttgaggaacgaagaaataaacttagcaagctgattgaggacaaaatgagatggtccaggtttgactagcagctattccaatataatatgctgcaataaaaagcaaagtattttttctttaattactgcctattgaaatgagatctttattggattttcagtttttgtgctttctggtcagcaattgacccaagtactaggcatcggatgtctagagagaagactgatgtcatattaaaagtattagtgaagcatttttttgtggagaaagaggttacttcaacattagtgatggattctctgtatacgggcctgaaggtgcttgaataccagagcaagggcaagaaagggagaacgatagctgatttggatgaactgcctgcacccatgatccatgttgacatggacatgtttgttttggccagtgatgttatagatttgcttgagagagcagccttagaaccactgccttgtcaacctgtgtctccaaaggatgacaaatgttcccagagtcgcatgaaggtagggattgctttgatgattgaagcatgatttttttccctgtttaataatctcagtataaatctttatgctcctagatatattatattgggaatattttttgttgtgagtttcttgtattgtatctgtgcatagttgtttggtgatcggtttattgcagagtagaggtttttctactggatttgcagtctgtcttactattctcactgtcataggatggtgcttctggtgaggttaacaaaatttccatggagcgcgaggaaagacgcctaactgagcttggtcggaagatacttgaaacatttgtgctatctcatatattcaggtaaaaagaattatttaggctgattttcttttggttaccgatgtagtgttggccagtaccaatagtcgatccctaggctttgtgggtggtttatgttgagccttgggcatttgaatgaaattatttgacctctaaaattcgaagacttctctaacagacaaactaccgaaattttagaaagctgcgtgtacgaattttgcattaagctaatgcatatacatttttctaacttaaaacagaatagatttttagacaaattgttagctacctaatagtcctactgtgctctttatttgtcagtggaattgaagttgcgtaccaagaagctgttgctttgaagagacaagaagagttaattcgagaggaggaggaagaggcatggcttcttggaaatgagatgaaggggaagcgtgggggtggtgctaatgaaaaagataagcgtgcaaagaagaaacaggtcatattctttatagaccttagttttattatattgagtatcatattggctcttctatgtgcctcaatagtgaagcagaactatagctagaagcttcataagcgattatcgtacccaatagttattgaacttaaattgcttagcgatttttggagtcagcatttacaacttttgtgatttgatttaattaggttatgcatcacaaaagaaaatatttaatcctatatcttgcagtttcattagggtatattttccacatttccatccttccctgcttctactgccaagttgtggtgagcaattttccatgtagttgatgcttagaaccagcctctgggatgttttatttggtcaaattgcatctgctttctcctggatgctgtttagaaactttctgattgtatgtactctgatttttattttgaagttgatagaaattaaaaacacatgttgagttgtactgcacttggccagggtccaatgcaacctttcataaaactgtccaaactggacagatacttggccagggtccagcgtagcctgtaaggcatccattcttggtcatctcaatttactcaggaactatattctttatagtttcttctatcatggattcgtggttccatattactattgctgcactagcatatttctgttgcgagcttaatatcacgtgctaggattatttgggatgaaacgggtgaaggggaatagattggatcataatagaggaaagaacagggaatggccctgaacctaaacggcacgtcgctctccgttgcaccaagaaggcagggccgatgggcgctaataaatcttgatctaatgcctaactgacctgagataggatccctccttatatagatggaggactccttaacccaatcctaacagaccgtgactctatccaactaagctacgtacttatattgatggatatcgtttccattgggcctaggactcccggcccaaagcccatgacacttaataataattattggcttttattattctctgattttactgctgttgtgcgaccctagcatcgggtttcccttgtgacattccaaatgaaaaatgttattagctcctagtcctgagtaacattgaattatcttctgaagtcttgtgctagtgccattctcgaagaacagctcttattctggggttgaaaatatatttgggtgaacatttaatattagtgtgaattgctcaggtacaactgatgtgaagttttatggttttgaagacctcaacctactttatttagggtcactacatagcttcatttcatcatgtcagttgtgttctatttctataattttatatgcattttgatccttagctctccttaatagtttgatgcgatgtttctttctcttgtatcatcttgttttttccactaatgctgaatcattcttttcaggccaaacaaaagaagaacaatcgtaagattaaagacaaggaaagagacgaaaaatttgaagcaaagattctggaaagacttcatgatgaaactgcgattgatgatagtgatggcttatcatcaaagcaggccgaagaagtgacaacaaaggttgaaaacttggaagaaggtgcttcagataggcaaggtgatctagatagttcagaaattgctcaccgaccagactcaggtgacaagtatcctagacaaatgaatggactgagtgatgttactggcaatgcacaaaaggtaaagaaggcctcctctatggaggctaactcaccagtctttctggctgattctgttgctgcaagcggcactcatagcagaggaaataatttgtcagacagtaagaaccgcatgacaccaaataggtaggtgaactctagtttctaaggcttgcattgtgatgctagtaaaattggcatctgctctaactggaactatctgcagagggaaaaatcagcgtaacaagggcataagcattatcagcttttctgaggaaggtgagggtattccctcgagttctactggtggttcggctcgttgtagttctagttgcggcacatctgcaaagttggaccaagataccgttctactcaccttgaaggataaactccgtaagctggggcaacgtctacatgaggtgatacatcttcttgaaaagttaactgcctttgttttgttgtgatatgtgaagtccagctgctctgttttggtcatatgcacgaccttccacggattatattatgagcattgtttttaaatgggatgagtgtcacatatgttgattgtatggaatatttgttttcgacccattacccttgtgcaattcatatttaaaatttattacaaaaggtaaacaatataagtatgtcttccatatttcatgcctatggctaatgactggagtctatgaattttaatctcaattttttcgtcagactaaacagctcttccattttctttttattaatggatataacttgctttaatctgtgtgtttcagaaaaatatggaggggcgaaaacttctccaagctcattttgaagccatggaagcaaagacgagtggttcatctccctcatccagtcctttggatgaaacacctgatgttgtgaagagccctgagcagtctgcagaaggtacaacagatgcaaaagctaatggaacaccaaataaggatgaacccgtgacaaattgcgtggcagaggaatctgtttcagtcatgccaggcacaaagagtactgaagctttatctggcatggcccttgccaagacaaaagttgagccagtttcaaataaagatcatgttccaaaaccaacattgcaagccaatagagcatctgct</dnaseqindica> 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