Os05g0509900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0509900 |
|---|---|
| Description |
Transcription initiation factor IIF, beta subunit family protein |
| Version |
NM_001062540.1 GI:115464810 GeneID:4339276 |
| Length |
3036 bp |
| Definition |
Oryza sativa Japonica Group Os05g0509900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:25321922..25324957 |
| Sequence Coding Region |
25322258..25322377,25322528..25322677,25323020..25323091,25323178..25323308,25324034..25324142 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:25321922..25324957 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:25321922..25324957 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggcgaggaggccaagtacctcgagacggcgcgggccgagcgctccgtgtggctgatgaagtgccccccggtcgtctcgcacgcctggcagggcgccgtgtcctcctccgacgccgccggctccaaccctaaccccgtcgtcgccaaggtcgtcctctcccttgacctcctccgctccgaggagccctccctccagttcaagatggagatggctcaaactaacactggcaatacaccaaagagttactccttgaatatgtccaaggattttgtaccaatgtgtgttttctctgagtctaaccaagggaaactttcatgtgaaggaaaagtcgagcataaatttgacatgaagcctcacagtgataatttggtgaactatggaaagttatgccgtgaaaggacacaaaagtccatgatcaaaactagaaaagtgcaggtaattgaggatcacagaatgagcctgataccgttgcctggcatggttggtctcataccttctggttctaaggagaagaagaagcaaacaccaaccaaaccatctgatgcaaaaagaatacgtagggatcgcagggaactggaaaatattatattcaagctttttgaaagacagcccaattgggcactaaaggcgctggtgcaagaaactgaccagccagagcaattcctgaaggagattctgaatgatctgtgtttttacaacaaacgaggaccaaaccagggaacgcatgagctcaagcctgagtacaagaaatctacaggggacactgatgcttcttga</cdnaseq> |
| Protein Sequence |
<aaseq>MGEEAKYLETARAERSVWLMKCPPVVSHAWQGAVSSSDAAGSNP NPVVAKVVLSLDLLRSEEPSLQFKMEMAQTNTGNTPKSYSLNMSKDFVPMCVFSESNQ GKLSCEGKVEHKFDMKPHSDNLVNYGKLCRERTQKSMIKTRKVQVIEDHRMSLIPLPG MVGLIPSGSKEKKKQTPTKPSDAKRIRRDRRELENIIFKLFERQPNWALKALVQETDQ PEQFLKEILNDLCFYNKRGPNQGTHELKPEYKKSTGDTDAS</aaseq> |
| Gene Sequence |
<dnaseqindica>2581..2700#2281..2430#1867..1938#1650..1780#816..924#172..369#gttcatctaactgcacgtcacgccctccgcgtgtgcctccccttcgcccgctcgctccgtcgttaagccagatcgcccgccgctccgtgccctagcgccgccgccgccgccgccgacaccggaatcgccgggcagactgcgagcgcggagccaccagcgtggggcggcgggatgggcgaggaggccaagtacctcgagacggcgcgggccgagcgctccgtgtggctgatgaagtgccccccggtcgtctcgcacgcctggcagggcgccgtgtcctcctccgacgccgccggctccaaccctaaccccgtcgtcgccaaggtcgtcctctcccttgacctcctccgctccgaggagccctccctccaggcaagcctcccccgcccactccctctcccttgcggattcgaatggtagtacattctcttcgagcaaaatgatatgaccctatggccgtgggggttggtaatgtatgaacctcaaatgtagatttcatgcattatgcttgggaaaaatgggacaaaattctgcaccgaccgtaacatagatgtagtggtggagggtttgactgccgaatgtgataatacgattgattggatgggtaacatttcagttgatttcccatttgcgaattgctagacagaatcagatgcattgaagagtgcagaggtttaattagagcgggatacgtcatactgctctgctctgtttgataattgttccccgttctatgttagtttcatcactcatttctttttgcttgtggtgcctatagttacatcattcattataacatggtgctattggcatggcagttcaagatggagatggctcaaactaacactggcaatacaccaaagagttactccttgaatatgtccaaggattttgtaccaatgtgtgttttctctgagtctaaccaaggtaggagtccaattcccagcttgttaacttatactgcttgcgttctttttctctgtacatattactatcctgatagacatagtttttactcgttcctgtatgtcagaagtctgtgttcatacaatcatacttgattttacctgtatgagtttagacatactacgtttggggcttcccacaagtttaagtgcatgcttttgtactataaagcatgaatcagactggaatgagtaggtgactaggtgcttattgttggacatttattgatcctatgtctggggcttcctacaagtttgagtgcatgctttgtactatgaagcatgggtgactaggtggttattgtaagatcagtatttcctaaacttgtttgtggtttagtagccatctatttagcacttgtgctaaggggccttcacataatccttcgtgtgtgtgcatcttttgtccaagttactccaatatataggaaaaatactatcatgttgtttgccaaagtcaatggtgtccggattgatttaattagtaagtagtaagccttcaagaatcttgactggaggtgagctatcactggcagtttactgcgttcccagtcagaaagttacccttactggttaccagtgattcttatggattttttattactacttacatttttggggatctttcaagtttcaatagcatctaagttttgactatcacccaaaaatgacctttgtgtgttgtagggaaactttcatgtgaaggaaaagtcgagcataaatttgacatgaagcctcacagtgataatttggtgaactatggaaagttatgccgtgaaaggacacaaaagtccatgatcaaaactagaaaagtgcaggtgaagtactgcagtccttcattggctatcttacattaccgtaattttaaagcattctgatttgtggttttgttccctacttgaaggtaattgaggatcacagaatgagcctgataccgttgcctggcatggttggtctcataccttctggttctaaggtgctttcattttccgaaatgaagattgagatttcctttttgttcttctgttatcattaatgatatagatcaacattcttaataactctaggtgtttaatttctgtggtggatgttatttcaagttaatagagtgctatctaggtagtaaggatctgcatacatgttttctgatttctctctgattatggcttataaaatgagttcagtacttgatttcctctacttttttttttatctttaccatgttgccaaatgccaatcatgtggtcggcctcttcatcttgaactactcatcatcagttaaagtttctcataacacatttaattttgtgctcttcaggagaagaagaagcaaacaccaaccaaaccatctgatgcaaaaagaatacgtagggatcgcagggaactggaaaatattatattcaagctttttgaaagacagcccaattgggcactaaaggcgctggtgcaagaaactgaccagccagaggtatattcttgatttatttggcgtctctatttttaagtgaaaaaaacattggttaagatactttatttgtggtgttcctatgaacaacaaatattttattcattactctcaatggttgctttgtgattgtttgtgcttcgttttatgcagcaattcctgaaggagattctgaatgatctgtgtttttacaacaaacgaggaccaaaccagggaacgcatgagctcaagcctgagtacaagaaatctacaggggacactgatgcttcttgaatatgctagttcatttaactgctttcggataaccaacatactcaacctgttgactctgaagtcacgaacattgagttgtgcagacatctcatatttcagtaacattcgttctgctgctaaatgctaagaggcataggcgaatagttgtaaggatagtttgatacatttattagagaaaagaatagaaaagaaaaatctggaatctatgttcaggtaaaataatgtgcctggtgggagtcgcagcgtagagcatagtcctattcataattttcgttgtttatatgctgtttttatgtctcatttcatcatttgaaatgcaggatttatctgattctt</dnaseqindica> |
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