Os05g0522400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0522400 |
|---|---|
| Description |
Zinc finger, SWIM-type domain containing protein |
| Version |
NM_001062616.2 GI:297604765 GeneID:4339360 |
| Length |
2776 bp |
| Definition |
Oryza sativa Japonica Group Os05g0522400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:26071441..26074216 |
| Sequence Coding Region |
26071441..26072462,26073289..26074216 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:26071441..26074216 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:26071441..26074216 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtatatttttgttgctatgatttgtaggacaaatcacaatgagttgaaattagttgttagagttgggtcgtttttcagcttgctagatgaagggtcaaagacctatatggagggtaaaacatcgccaacccaacttgttgacatgcataactatggcttgctagaattagtaaatttcatagctgaacacttcatatggggttctaagcaatacatgactttgtggtgttctatggatggtgactctgttgagattacattagatgaacaattgctagattggtttcagctgaacctagagaagggggttgtatgcattgatgcccaaataattgattttgatggtccattgcaattttcacccacaaaacgtaggtatcatccttcagtgaggaatagggcagccataagtgagatagctactaatgagagagccactattgagatagccacaaatgagatagccacaaatgagagagccacaaatgtgatagccactaatgagagagccacaaatgtgacagccactaatgagagagccaagaaatccaaaaaaaggggtccatgtgatgaggaggcagtcggagttgttgatgagggcatatactctgacaccgaatcacttgtggcacagagtgatagcagctatgactctgacttggcggaatcatttgattctgaatttgactgctctgaccctgagtttgatcctgatcaagaaatagttgatgaggatgacgacgatgatgtccctgtctttgcatatgatgttcatgatccatgtattgatgttggtgtggtgttcccagatgtgaatcaatgcaagtcagcagttacacatcattgtatcttgaatgatcatgcttttgacattatcaagaaagacaagaaaagatttagagccaaatgcaagagtgcggatcaaggtttggttattagtacagatgcaggcaaaggaatagagggggctgtagatgatgtatatccaggagtggaacatagggaatgtatgagacacttgtggaagaacatgaagaagaagtaccatggtcctctgtttgcccaaaatatgtgggcagctgctaagagcttcacaaatgtgaagttcacctaccacatggacaagataaaggagaggtgccctgaagccctaacctggttagatgacaatcatccatacatttggagcagaagcaagttttatgaggagtgcaaggtagattacatcaataacaacctctctgaatgtttcaatagttgggtctcaaaaatcaaggatcgtcagattgttgacttgcatgacaccataagaaagatgatcattagcaagtttgtgtcaagagccaagcttgcttgtaaaatggatgaaaggataatcccatctattactaacactctgaatgcaaaaagcaagaccctcaaaaaccatgaggtattgatatgtgggtctggaactgttgaagtaactgtgggcaccattacacatgcagtaaatttgaaggaaaggacatgtacttgtagggcttggcaagtgagtggaaagccttgtgatcatgctttggctttcattgcaaagcttaatagggaggtacaaatggatgattttgtggataagtgcttctctatagagatgttgaaaatggcttatgcaggacagttcaatccaatggcatctaaggatgagtgggcacatgttgatctaggctataaaatcaagaagcctaggttgagaaggaaacctggaagaccaagagtggctaggataagagcttctgatgaggctagcactagtaaaaggaaaaaatgcagtgaatgtcatgagcttggccatacagcgaagcattgccagggaggtctcacagcaagtcaaaagaggaagctctcatcttcacaaagtggaacaggagaggggatcaatgacccaagtgatgcacccacatcagtgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MYIFVAMICRTNHNELKLVVRVGSFFSLLDEGSKTYMEGKTSPT QLVDMHNYGLLELVNFIAEHFIWGSKQYMTLWCSMDGDSVEITLDEQLLDWFQLNLEK GVVCIDAQIIDFDGPLQFSPTKRRYHPSVRNRAAISEIATNERATIEIATNEIATNER ATNVIATNERATNVTATNERAKKSKKRGPCDEEAVGVVDEGIYSDTESLVAQSDSSYD SDLAESFDSEFDCSDPEFDPDQEIVDEDDDDDVPVFAYDVHDPCIDVGVVFPDVNQCK SAVTHHCILNDHAFDIIKKDKKRFRAKCKSADQGLVISTDAGKGIEGAVDDVYPGVEH RECMRHLWKNMKKKYHGPLFAQNMWAAAKSFTNVKFTYHMDKIKERCPEALTWLDDNH PYIWSRSKFYEECKVDYINNNLSECFNSWVSKIKDRQIVDLHDTIRKMIISKFVSRAK LACKMDERIIPSITNTLNAKSKTLKNHEVLICGSGTVEVTVGTITHAVNLKERTCTCR AWQVSGKPCDHALAFIAKLNREVQMDDFVDKCFSIEMLKMAYAGQFNPMASKDEWAHV DLGYKIKKPRLRRKPGRPRVARIRASDEASTSKRKKCSECHELGHTAKHCQGGLTASQ KRKLSSSQSGTGEGINDPSDAPTSV</aaseq> |
| Gene Sequence |
<dnaseqindica>1755..2776#1..928#atgtatatttttgttgctatgatttgtaggacaaatcacaatgagttgaaattagttgttagagttgggtcgtttttcagcttgctagatgaagggtcaaagacctatatggagggtaaaacatcgccaacccaacttgttgacatgcataactatggcttgctagaattagtaaatttcatagctgaacacttcatatggggttctaagcaatacatgactttgtggtgttctatggatggtgactctgttgagattacattagatgaacaattgctagattggtttcagctgaacctagagaagggggttgtatgcattgatgcccaaataattgattttgatggtccattgcaattttcacccacaaaacgtaggtatcatccttcagtgaggaatagggcagccataagtgagatagctactaatgagagagccactattgagatagccacaaatgagatagccacaaatgagagagccacaaatgtgatagccactaatgagagagccacaaatgtgacagccactaatgagagagccaagaaatccaaaaaaaggggtccatgtgatgaggaggcagtcggagttgttgatgagggcatatactctgacaccgaatcacttgtggcacagagtgatagcagctatgactctgacttggcggaatcatttgattctgaatttgactgctctgaccctgagtttgatcctgatcaagaaatagttgatgaggatgacgacgatgatgtccctgtctttgcatatgatgttcatgatccatgtattgatgttggtgtggtgttcccagatgtgaatcaatgcaagtcagcagttacacatcattgtatcttgaatgatcatgcttttgacattatcaagaaagacaagaaaagatttagagccaaatgcaagagtgcggatcaaggttgcaagtggctgtttttgcatctactagtcccaagtacattggatgtaaggtaagttcagatttgtatttttttagttcttttctgcattaagtaatttcagccttgtccttacttaacatgaattttgtctatgcactctatggctgcaggttaagataagtggaccaaagcacacttgtggttcttttaataattgcggtgaaacaatggcttcaaataaatgggtagctgaccgagtagttgagttgctgcgggatgacccctcattaggacctaagaaactgaaggaagagctgaagaagaaatactcagtgaatataccttatttaagggttttcggaggcaaggagagagcacttgacatgataaatgtgaggtgggatgacagctataacttgttgcctacttatcaagatgagcttctgagatcagtgccaggcagtgtagttaagttggacactgaagagaataatggtgatgtgtgctttaggaggttcttagtagctctcaaactatgcattgatgggttcttgcaaggatgcaggccatacattgccatggactccactcacttgacaggaaggtctagagggcagttggcatccgctgttgcaatagatggtaataacaggctatttcctgtcgcttacggagtgattgagacagagtctaaggaaagttggacttggtttgtccaaaatttgaaggaagctattggtacccctacaggttcgtattttttcttacatctttcatctttcatccttcatgttgcatttgcatattattccagttgctaactacaattttgtaccattgtaggtttggttattagtacagatgcaggcaaaggaatagagggggctgtagatgatgtatatccaggagtggaacatagggaatgtatgagacacttgtggaagaacatgaagaagaagtaccatggtcctctgtttgcccaaaatatgtgggcagctgctaagagcttcacaaatgtgaagttcacctaccacatggacaagataaaggagaggtgccctgaagccctaacctggttagatgacaatcatccatacatttggagcagaagcaagttttatgaggagtgcaaggtagattacatcaataacaacctctctgaatgtttcaatagttgggtctcaaaaatcaaggatcgtcagattgttgacttgcatgacaccataagaaagatgatcattagcaagtttgtgtcaagagccaagcttgcttgtaaaatggatgaaaggataatcccatctattactaacactctgaatgcaaaaagcaagaccctcaaaaaccatgaggtattgatatgtgggtctggaactgttgaagtaactgtgggcaccattacacatgcagtaaatttgaaggaaaggacatgtacttgtagggcttggcaagtgagtggaaagccttgtgatcatgctttggctttcattgcaaagcttaatagggaggtacaaatggatgattttgtggataagtgcttctctatagagatgttgaaaatggcttatgcaggacagttcaatccaatggcatctaaggatgagtgggcacatgttgatctaggctataaaatcaagaagcctaggttgagaaggaaacctggaagaccaagagtggctaggataagagcttctgatgaggctagcactagtaaaaggaaaaaatgcagtgaatgtcatgagcttggccatacagcgaagcattgccagggaggtctcacagcaagtcaaaagaggaagctctcatcttcacaaagtggaacaggagaggggatcaatgacccaagtgatgcacccacatcagtgtga</dnaseqindica> |
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