Os05g0297900

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Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0297900| Description = Similar to Signal peptidase 18 subunit (Fragment)| Version = NM_001061656.1 GI:115463042 GeneID:4338334| Length = 37...")
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Gene Name

Os05g0297900

Description

Similar to Signal peptidase 18 subunit (Fragment)

Version

NM_001061656.1 GI:115463042 GeneID:4338334

Length

3741 bp

Definition

Oryza sativa Japonica Group Os05g0297900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:13260214..13263954

Sequence Coding Region

13260304..13260382,13260976..13261088,13262459..13262530,13262669..13262704,13262824..13262869
,13263013..13263100,13263188..13263245,13263503..13263553

Expression

GEO Profiles:Os05g0297900

Genome Context

<gbrowseImage1> name=NC_008398:13260214..13263954 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:13260214..13263954 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggattcatcggcgatacggtggagtcgatccgctcgatacagatccgccaagtcctcgcgcaaatcatcagcctcggtatgattgttacctcggcactgatcatatggaagggattgatggttgcaacggggagcgagtccccagtggttgtggtcctttctggtagcatggagcctggatttaaaaggggcgatatcctttttctacacatgagcaaagatcctatccgcacaggagagatagttgttttcaacattgatggccgtgaaattccaattgttcaccgtgtgattaaggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggtgataataattttggggacgaccgtcttctttatgcacatgggcagctttggcttcaccaacatcacattatgggacgggctgtaggctttcttccatatgtcgggtgggttacaatcatcatgactgagaaaccatttataaagtacctgctcatcggcgctctgggcttgctggtcattacatcgaaagagtaa</cdnaseq>

Protein Sequence

<aaseq>MGFIGDTVESIRSIQIRQVLAQIISLGMIVTSALIIWKGLMVAT GSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVH EREESAEVDILTKGDNNFGDDRLLYAHGQLWLHQHHIMGRAVGFLPYVGWVTIIMTEK PFIKYLLIGALGLLVITSKE</aaseq>

Gene Sequence

<dnaseqindica>91..169#763..875#2246..2317#2456..2491#2611..2656#2800..2887#2975..3032#3290..3340#aaacagaacgcagtacacgcagatttgttttcctttcttctcccagcgttgagttcgccgccgggcgccgggagccgaggcccgagagagatgggattcatcggcgatacggtggagtcgatccgctcgatacagatccgccaagtcctcgcgcaaatcatcagcctcggtgacgcccttcatctcatcccctgattatgttcgtcggttttagagtttttcttttcggagtccttcccgttcagatcagtgggttgcggggcgccgcgtagttcttgatttcaaaggtagtgatggatttaccgcgcgattatgcgaaagcttcggttctttgaagcgtttgggaggttacgcctgcaggatttggggagggaggctttaggggttcttgatctgttcctgtgaggttattaaggttttccttttcttgaaagaaaaaacgaggaatatctgcattgtatatgaaagccttagaggaatggattgtgatttttctgctctcgtgtaatgtgggttgtgactttggtgaatgcctgtagatgattgttttaaacttaggggttagagctagttgtaaataataatactgttccctgcttaagattagattgtaaagttgtgatatttagggaggggaaaagaagggtattgggttttatcagttaatctgcttttttgtttgtttgtttgaggttttagtgctcttggatttgttgtctctttggttggggactcgttattgagatgttttttactttgcaggtatgattgttacctcggcactgatcatatggaagggattgatggttgcaacggggagcgagtccccagtggttgtggtcctttctggtagcatggagcctggatttaaaagggttagtttccacctaacaaaactatgaaatttgcttattttaattacatttatcctcgtcttgtcctgtggacataattattcgcctatcttgtcctgttaagattttgcatatctgcttttttcgaataaaatgcacttgctccactttatattgaagcaacatagtttagggtcaccagagcagggaaatggaaacacacagaaatgagagaaaccagggtgcaaaatatatcatccaaaatgcacagtaatggactgtaaagtggcagatatagtgagagcaaaatagaagaaaggctaacagagttatttcttaattttctcgcgaatgccgcagtctatccatcaccagctttaaaaacacattcctttgctgcatggaagaaccatcctggacctggaaataaccacaacaggctgcctgatccattttccttctatctccattttatttgttggtaaccaaacaggccacacaactgtggccaagcctaagatccagggcccagcctctcgatcaatcttcatttgaacccagatgtggataacttttccaagccataggactgcactcctaaccaagggcttcattttcattgatgctgcactgaagccataatatacctaagaagacacaattcccatcttgtatcaagccacacagagcatatttatccgagccacccatttcttatgcaccaccttttggtagcttactcgatagtgcttgtggtaagtttaggccaaggaatccaccacatggagaactggtctggcattgattgacgttctctttttctttttgattttgtctgtattaactaaataaaaacataataatcaaaggaattttagctttccagagatcttgtagctgacattttactcaacccaaattgagttctgcgcaaggagctaactgtgaattcacctgatttctctagcacccatttaattccattagttcgatcttccaagtcttccaaacacgtgataaaagccaatctctagttttttctaaagcaaaagacctttggagtcgaccttccctcctcttctgaaatgcagtttggaacaaaacaccgaggataagaatacacattgtatagttcttttgcataagagtagattccgtttcatagttcggttagtttgtaactagttgctgccttgtccttttcccttccttccatctttaacttgttatttcccagtcatcacttttaaaggataatgttacgtcaatctgataatgtgttagtgaatattgtctatttagtccccagtgttttctccatgtttcatttttgcatcctttgatcatctttcacactagtaaacctgaatgatgtattatcttctttgcagggcgatatcctttttctacacatgagcaaagatcctatccgcacaggagagatagttgttttcaacattgatgtaagtcttactgagtcattgtaacttattatctgtacattactcgctgaatcatgaatttatcaattggccctataaatcatgcttacatatgctcctgaaatcattaattttaacatttggttgtaccgtatgtagggccgtgaaattccaattgttcaccgtgtgattaaggtaatgaactctgaagttttcgtcaatcaatctaattttttattagttgatgttaagtcaccttttatttcgttatttttcctgggtattcatttgagtttactcttatctgtgtataggtccatgaacgcgaggaaagtgctgaagttgatatcctcacgaaaggtattaaccatatttccttttgctccatatgtttctctttctggtcaatttgtgtagtgctggttgcaatggacatctagaaatgtttaatgtacaatgggtgccaatgaatgttttgtcttaactagtaaactgcttctcaggtgataataattttggggacgaccgtcttctttatgcacatgggcagctttggcttcaccaacatcacattatgggacgggctgtagggtcagtatgctcaatttgagaacattaatctattgtcattcctggtgaaaattaacttggccaaccttatttttctgctgtctgcagctttcttccatatgtcgggtgggttacaatcatcatgactgagaaaccatttataaaggtatgctcttccttgtttactaacctggagattaaactacggttactctaatccattatccatgtgggaatagtttgtaagatgttgataaaagttttagtcctcgattattatttccaatattgtaaatagatactaggtaggtctgtcagttatctattccctagatagactataactcaaattgagaatattatttgtagcttaatcgatctattgctgagagtatggctgacatttgttatctgttgttgcagtacctgctcatcggcgctctgggcttgctggtcattacatcgaaagagtaaaacatcaacttcacccaagaatttagcgcaaacattagaggccagtggcttatacactccttagggaagataccttttgtttcaccatgttattgggaacaaaaagacatgcttgcaccaatggatgaaaaaaaaacgtttattctggatctgatgtaacatctcctatagtcctagttaaagattaaatatgatttattgcgttggatgaaatttacttataaaaaattccttgtatgacactaaactagtactatgaactatgaagtggtcaatggttgtgaccagtagggcgcctcaggctttttcacttgtggtagatgttgacaagtaactgatgaagagagatgagctctgtagctattgacaactgaagagtaaagttgagttttagtcactgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0297900, RefSeq:Os05g0297900