Os05g0298200

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Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0298200| Description = Ankyrin repeat containing protein| Version = NM_001061657.1 GI:115463044 GeneID:4338335| Length = 4220 bp| Definiti...")
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Gene Name

Os05g0298200

Description

Ankyrin repeat containing protein

Version

NM_001061657.1 GI:115463044 GeneID:4338335

Length

4220 bp

Definition

Oryza sativa Japonica Group Os05g0298200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:13286036..13290255

Sequence Coding Region

13287211..13287960,13288639..13289430,13289637..13289696

Expression

GEO Profiles:Os05g0298200

Genome Context

<gbrowseImage1> name=NC_008398:13286036..13290255 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:13286036..13290255 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggaatcccaatcccaatcccatttcccgctccggtgggagagcaccggcgaccaatggtggtacgcgacgcccatcgactgggcggcggcgagcggccactacgacgtcgtccgggagctcctccgcctcgacgccaacctcctcatcaagctcacctcgctccgccgcatccgccgcctcgagtccgtctgggacgacgacatgcgcttcgccgacgccgccaggaaccgcgccgccgtcgcccgccgcctgctccacgactgcgagccccccaggggcgccgccgctggcggcggaagccggcccaaccggctcatccgcgcgggctacggcggctggctcctctacacggcggccgccgccggggacgcggccttcgtgcgggagctgctcgggaggcagccgctgctggtgttcggcgagggggagtacggcgtcaccgacgtgctctacgccgcggccaggagcgacagctccgaggtgttccggctgctgctcagcgcggtgctgtccccgcccgagtgctccgccgggggagaaggcgacggcggcaccgccgccattgctgggggtttcatgttccggtgcgagatgatgaaccgcgcgatgcacgccgcggcaaggggaggcaacctggaggtcctcagggagctcctgcaggggtgctccgacgcgtcggcgttccgggacgctcagggatcgacgatcttgcacgccgcggccgcgagggggcagcttgaggttgtgaaggatcttattgcctctttcgatatagtcaactccacagacgagcaagggaatacggcattgcatctagccgcctttcgaggtcatttgcccgtggtcaaagccctcatcactgcatccccatcacttatatcagctacaaatgaagttggcgacacgttccttcatatggcgctgactggctttaggaccccaggattccgaaggcttgatcgtcagatggagcttatgaagcaattgattggtggagtgatcatggatttaagcagcattatcaatatgcaaaacgacgatggaaggacagttcttcacttggctgtgattggcaatctgcactctagccttgttgagctcttgatgactgcaccgttgattgaccttaatgtccgggacaatgatggcatgactcctctggatttacttaggaaacagccaccaacagcatcgtctgagatactcatcaagcagcttattttggctggtggaattgcaaattcaatggaccatgagaccagatcagccattgcttctcagctaaagatgcactgtatcgtaggcagcccgggaacatccttcaagatcccagatgccgagatcttcctccatgcaggtatcgatgcgtcagacatcagcgaaagaacgaactcattctctagcgttggacagagtgagccagaatttccggaatccagtcgtaagaagctgaactctatgcaaaatgcagcgaaacatctcaagatcctactcagatggcccctccgcaaggagaagaaatcatcatccggtgcccgaatcgccttcaggctcgggctcctggtcgtcgtcgtccttggtcgacaggattga</cdnaseq>

Protein Sequence

<aaseq>MEEESQSQSHFPLRWESTGDQWWYATPIDWAAASGHYDVVRELL RLDANLLIKLTSLRRIRRLESVWDDDMRFADAARNRAAVARRLLHDCEPPRGAAAGGG SRPNRLIRAGYGGWLLYTAAAAGDAAFVRELLGRQPLLVFGEGEYGVTDVLYAAARSD SSEVFRLLLSAVLSPPECSAGGEGDGGTAAIAGGFMFRCEMMNRAMHAAARGGNLEVL RELLQGCSDASAFRDAQGSTILHAAAARGQLEVVKDLIASFDIVNSTDEQGNTALHLA AFRGHLPVVKALITASPSLISATNEVGDTFLHMALTGFRTPGFRRLDRQMELMKQLIG GVIMDLSSIINMQNDDGRTVLHLAVIGNLHSSLVELLMTAPLIDLNVRDNDGMTPLDL LRKQPPTASSEILIKQLILAGGIANSMDHETRSAIASQLKMHCIVGSPGTSFKIPDAE IFLHAGIDASDISERTNSFSSVGQSEPEFPESSRKKLNSMQNAAKHLKILLRWPLRKE KKSSSGARIAFRLGLLVVVVLGRQD</aaseq>

Gene Sequence

<dnaseqindica>1176..1925#2604..3395#3602..3661#gcttctgcacacttctttgcatgtgaacccaagctcacgcacgctgacagttcatacagctactgtaaaaaaaaagtttccacctggggccaatactttatacggactcacagtagtacttgtgagtagaacaaatggtctaaattgttcattgattctgttatagattgcttaagccagcagcaagaaagagtactggtaagcaggccaaatatgtggctggtttcttgttttttccctgtaatttgtacatagattaatgtttccttgcaaaacttgtgcctgcattcttggttcttgccataatttctttgggagcggatgagaggagatgagacaaggtcgtccttgctggaccgtgtctttactgctatgatctttgctggttgaggcagatgtggtggatggcttctcttgaagaggtcttgggttcacatggccattgcttgcctcctcctttctccgtgacgtcttcttcctgtggggttcttccctttggagcttggcccctacctactcaggacaagcgtgtagatgcaggcgtgaatagcctttgcctgtgctcccatgtcaatcaagtgttctgtgctagattggtcccagagatggtgcctctctggtgctaatttctcttgagggtgtttctggtttggattactgagttaatgacgccatggctgggcagagtaggatgaggtttcttgcttcttcctctcttgagtttgttcttgggtaattaatccttttcctgggagcaacttgtgagttgtgactgtttcttggtttcctccgccttggttttaccccctttttttgcgttttttcgaggcatcgatttctgagccggataagtagttgagctgctggtggctgaattattaacagtccaattaattgctgacatcccaagatgggcagttcttgataaccccagtaatttaatcgctcggtttagtagctctggtttcaattgctcccacatggagtaacaattcattagttagagggatttagagctgaaacttcttctcaaaatcgcagttcttggttgttgatttccctctgttcatcgtggaaacgtgttaagctcaagttcttgcaatttttctttgctttttttttttgttttgtagaggaaaatttcttgattaggagatagtacaaggttggtggctatggaggaggaatcccaatcccaatcccatttcccgctccggtgggagagcaccggcgaccaatggtggtacgcgacgcccatcgactgggcggcggcgagcggccactacgacgtcgtccgggagctcctccgcctcgacgccaacctcctcatcaagctcacctcgctccgccgcatccgccgcctcgagtccgtctgggacgacgacatgcgcttcgccgacgccgccaggaaccgcgccgccgtcgcccgccgcctgctccacgactgcgagccccccaggggcgccgccgctggcggcggaagccggcccaaccggctcatccgcgcgggctacggcggctggctcctctacacggcggccgccgccggggacgcggccttcgtgcgggagctgctcgggaggcagccgctgctggtgttcggcgagggggagtacggcgtcaccgacgtgctctacgccgcggccaggagcgacagctccgaggtgttccggctgctgctcagcgcggtgctgtccccgcccgagtgctccgccgggggagaaggcgacggcggcaccgccgccattgctgggggtttcatgttccggtgcgagatgatgaaccgcgcgatgcacgccgcggcaaggggaggcaacctggaggtcctcagggagctcctgcaggggtgctccgacgcgtcggcgttccgggacgctcagggatcgacgatcttgcacgccgcggccgcgagggggcagcttgaggtgatgctacttcctgcttcacaaattttttatctatgaaatattcatgacagggtaattccatagaagaattagttttactttgtagctgcaacttttgttaacattttgtcagctctaatctatgaaactttctgattcttgaggtgatttgatcatatttaattgctaatctggggacactggaatgatatatatctgctacattattgtctttgatttgactgtccctgaagttgatcttgtgcacatgctagccagatttcctttcgttttacacatgatatgatttcttagtgacacatgatatggcatgttctagttaaattaatagagatggaaactagatggcattgacagatattctcaacctactactgaaatgtggtgtgtttagctgtcacgaatgtttggtgagagtcagcaactgaggtttagttgtaaaccattgacctaataaggaattttataatacatccatatatgcttgtcattggaagtgttcaccgacacgctaatgcgtggtgaagaaatagtctgttcatctgggatgccatgacaagtgtcttcccaccatctgttcttttgttctaaatttatatttattgattaaaatcgtcgtgtgttactctgtggatgcatactgaagtattagcatgttcttacttaattctacaggttgtgaaggatcttattgcctctttcgatatagtcaactccacagacgagcaagggaatacggcattgcatctagccgcctttcgaggtcatttgcccgtggtcaaagccctcatcactgcatccccatcacttatatcagctacaaatgaagttggcgacacgttccttcatatggcgctgactggctttaggaccccaggattccgaaggcttgatcgtcagatggagcttatgaagcaattgattggtggagtgatcatggatttaagcagcattatcaatatgcaaaacgacgatggaaggacagttcttcacttggctgtgattggcaatctgcactctagccttgttgagctcttgatgactgcaccgttgattgaccttaatgtccgggacaatgatggcatgactcctctggatttacttaggaaacagccaccaacagcatcgtctgagatactcatcaagcagcttattttggctggtggaattgcaaattcaatggaccatgagaccagatcagccattgcttctcagctaaagatgcactgtatcgtaggcagcccgggaacatccttcaagatcccagatgccgagatcttcctccatgcaggtatcgatgcgtcagacatcagcgaaagaacgaactcattctctagcgttggacagagtgagccagaatttccggaatccagtcgtaagaagctgaactctatgcaaaatgcagcgaaacatctcaagatcctactcagatggcccctccgcaaggagaagaaatcatcatccggtgcccgaaatgaactggacgacgacgcatcctctgtggattcagtcaagagctggagccacggggagaccccgacaccgctgaggcagaagtactccaggatgagctccctgttcaacaacaagcggaccatggcagccaggatcggctcaccgagtccatcgatgaagaagagcttcgcagatggcctcgcacatggcgtgatgcagcccgaatcgccttcaggctcgggctcctggtcgtcgtcgtccttggtcgacaggattgaagccgtccatctggacaagaatggccaagcatctcctgataccagtgtggtgatcaggcgtacacccaagaagcacgggtctttgaacagcaggctcatgaaccaatacttctgcatcggagcgcaggggatagctgtcgaggactcaaccacggggcagcgatcaagtcggatgttcagaagttcacttctgtcagctgcctgaattcgtaatttagacatggtttgctttccttgacttcactgcttacaagttacagctgatctgttagtatgtgcgagtgcatgtgagaagactgtcatatgttgtgtttgtattactgatgcaaaatggtgagatctactaatgtaatgtagtgctgttggtagtgtgtaatgattttgttgggagagtgagtacaatggaaggcatggttttcaagttctatggtttttatatcttacaatatcatatgaggttagtgagtataatttgtagcagagtaaattacattggtggtacacgaacttgttaagtgggtgcaatttagtatataaatttgtaaaatgctcattttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0298200, RefSeq:Os05g0298200