Os05g0527300
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0527300 |
|---|---|
| Description |
Retrotransposon gag protein family protein |
| Version |
NM_001062644.1 GI:115465018 GeneID:4339390 |
| Length |
1776 bp |
| Definition |
Oryza sativa Japonica Group Os05g0527300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:26268180..26269955 |
| Sequence Coding Region |
26268296..26269358,26269532..26269560 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:26268180..26269955 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:26268180..26269955 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgagttcgtcgaagacggcggccgggaatcctctcggcgggaacgcgatctcggagaaactctccaaatcaaaccatgcgctatggaaagcgcaggtcatggcggctgtacgaggagctcgccttgaggggcatctcaccggtgccaccaaaactcccaacgccctgatcacgacgacagcaggcgacaagggagagaaagaagtcactgttcgcaatccagaatttgatgattgggttgcaaccgatcagcaggttctaggattcctgctctccaccctagctagagacgttctggcacaggtggccacctgcggcacggctgcagcagcatggcagatgctggaggagatgtactcctccgtcacgagggcgcgcttcatcaacactcgcatcgctctctccaacaccaagaagggcactctctccatcaacgagtatgtctccaagatgaaggccctcgctgatgagatgacggctgccggcaagatcgttgatgacgatgatctcatctcctacatcatcgccggcctcgacgacacgtatgaacctgtcatctccaccatcgttggcaaggacaccatgacgctgggagaagcctactctcagctgctcagctttgagcagcgtctcgcgcttcgtcacggtggagactcttctgtcaatttggcgaaccgaggacgtggcggtggtggaggacaacaacgcggcggcaacaccggcaacggcggccgcggccgtggcggcaacaacaatggcgctaaccgcggcaggggacgcggcaacaatggcggcgcacgaccaccgggaggcgtcgacaacagacctaaatgtcaactctgttacaagaggggacacacggtaatcaactgctggtatcgctatgatgaagattttgttcccgatgaaaaatatgcaggatcggcaacatcttatgggattgatacaaattggtacgtcgacacgagtgcgacggaccatgtgactggcgaactggacaagctcacggttcgcgatcgctacaaggggcaagatcaagttcacaccgcaagcggtgcaggatctggccacgaagaaacttctgtttag</cdnaseq> |
| Protein Sequence |
<aaseq>MASSSKTAAGNPLGGNAISEKLSKSNHALWKAQVMAAVRGARLE GHLTGATKTPNALITTTAGDKGEKEVTVRNPEFDDWVATDQQVLGFLLSTLARDVLAQ VATCGTAAAAWQMLEEMYSSVTRARFINTRIALSNTKKGTLSINEYVSKMKALADEMT AAGKIVDDDDLISYIIAGLDDTYEPVISTIVGKDTMTLGEAYSQLLSFEQRLALRHGG DSSVNLANRGRGGGGGQQRGGNTGNGGRGRGGNNNGANRGRGRGNNGGARPPGGVDNR PKCQLCYKRGHTVINCWYRYDEDFVPDEKYAGSATSYGIDTNWYVDTSATDHVTGELD KLTVRDRYKGQDQVHTASGAGSGHEETSV</aaseq> |
| Gene Sequence |
<dnaseqindica>117..1179#1353..1381#ttatcaccatatattaacaaaggtgcggcctctaacgaggttcaacgcttctgcacctctgattttcacatggtatcagagcctatccatccacaaaatcgcatctaatccaactcatggcgagttcgtcgaagacggcggccgggaatcctctcggcgggaacgcgatctcggagaaactctccaaatcaaaccatgcgctatggaaagcgcaggtcatggcggctgtacgaggagctcgccttgaggggcatctcaccggtgccaccaaaactcccaacgccctgatcacgacgacagcaggcgacaagggagagaaagaagtcactgttcgcaatccagaatttgatgattgggttgcaaccgatcagcaggttctaggattcctgctctccaccctagctagagacgttctggcacaggtggccacctgcggcacggctgcagcagcatggcagatgctggaggagatgtactcctccgtcacgagggcgcgcttcatcaacactcgcatcgctctctccaacaccaagaagggcactctctccatcaacgagtatgtctccaagatgaaggccctcgctgatgagatgacggctgccggcaagatcgttgatgacgatgatctcatctcctacatcatcgccggcctcgacgacacgtatgaacctgtcatctccaccatcgttggcaaggacaccatgacgctgggagaagcctactctcagctgctcagctttgagcagcgtctcgcgcttcgtcacggtggagactcttctgtcaatttggcgaaccgaggacgtggcggtggtggaggacaacaacgcggcggcaacaccggcaacggcggccgcggccgtggcggcaacaacaatggcgctaaccgcggcaggggacgcggcaacaatggcggcgcacgaccaccgggaggcgtcgacaacagacctaaatgtcaactctgttacaagaggggacacacggtaatcaactgctggtatcgctatgatgaagattttgttcccgatgaaaaatatgcaggatcggcaacatcttatgggattgatacaaattggtacgtcgacacgagtgcgacggaccatgtgactggcgaactggacaagctcacggttcgcgatcgctacaaggggcaagatcaagttcacaccgcaagcggtgcaggtatggaaattagtcatattggtcattctactgttagaaccccaaatcgtgatattcatcttcgcaatatcctatatgttcccaatgcaaataagaatcttgtttctgccaatagacttgtctctgataattctgcttacatggagctttactctaaatattttaatcttaaggatctggccacgaagaaacttctgtttaggggaccatgccgggggcgactgtacgctcttccatcttcatcacctcatgaacgtcctcgtcctctaaaagaagcctttggagccatcaagccatcctttgagcgatggcacagtcgcctgggtcatccagcctctccaattgtggagaaagtcattagcaaaaataatcttccttgtttagctgagtcaaataaacagtcggtttgtgatgcatgtcaacagggtaaaagtcatcaattgccctattctagatcttctagtatgtcgagtcatcctttggaacttatttattctgatgtttggggtcctgccctcacttctgttgggggcaaacaatattatgtgagctttattggtgattatagtaaatttacttggctttatttgattaagc</dnaseqindica> |
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