Os09g0538400

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0538400| Description = Similar to P-type R2R3 Myb protein (Fragment)| Version = NM_001070331.1 GI:115480404 GeneID:4347711| Length = 1211 b...")
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Gene Name

Os09g0538400

Description

Similar to P-type R2R3 Myb protein (Fragment)

Version

NM_001070331.1 GI:115480404 GeneID:4347711

Length

1211 bp

Definition

Oryza sativa Japonica Group Os09g0538400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22021168..22022378

Sequence Coding Region

22021373..22021865,22022023..22022285

Expression

GEO Profiles:Os09g0538400

Genome Context

<gbrowseImage1> name=NC_008402:22021168..22022378 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22021168..22022378 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggtcaccgtgctgcgagaaggcacacaccaacaagggagcatggaccaaggaggaagatgaccggctcattgcctacatcaaggcgcacggcgaaggttgctggcgatcgctgcccaaggccgccggcctcctccgctgtggcaagagctgccgcctccggtggatcaactacctccggcctgacctcaagcgcggcaacttcaccgaggaggaggatgagctgatcatcaagcttcacagccttttaggcaacaaatggtctctgatagccgggaggttgccaggaagaacggacaacgagatcaagaactactggaacacgcacatcaggaggaagctgctgagccgtggcatcgacccggtgacacaccggccgatcaacgacagcgcgtccaacatcaccatatcattcgaggcggccgcggcggcggcgagggacgacaaggccgccgtgttccggcgagaggaccatcctcatcagccgaaggcggtgacagtggcacaggagcagcaggcagccgccgattggggccatgggaagccactcaagtgccctgacctcaatctggacctctgcatcagcctcccttcccaagaagagcccatgatgatgaagccggtgaagagggagaccggcgtctgcttcagctgcagcctggggctccccaagagcacagactgcaagtgcagcagcttcctgggactcaggacagccatgctcgacttcagaagcttggaaatgaaatga</cdnaseq>

Protein Sequence

<aaseq>MGRSPCCEKAHTNKGAWTKEEDDRLIAYIKAHGEGCWRSLPKAA GLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDN EIKNYWNTHIRRKLLSRGIDPVTHRPINDSASNITISFEAAAAAARDDKAAVFRREDH PHQPKAVTVAQEQQAAADWGHGKPLKCPDLNLDLCISLPSQEEPMMMKPVKRETGVCF SCSLGLPKSTDCKCSSFLGLRTAMLDFRSLEMK</aaseq>

Gene Sequence

<dnaseqindica>514..1006#94..356#aacagcagcagcagcagcagcagcaacttccactgaaacaacccaccgaggcagcagaagaaaggaaagaatcaagaaagcttcatcgtcttcatggggaggtcaccgtgctgcgagaaggcacacaccaacaagggagcatggaccaaggaggaagatgaccggctcattgcctacatcaaggcgcacggcgaaggttgctggcgatcgctgcccaaggccgccggcctcctccgctgtggcaagagctgccgcctccggtggatcaactacctccggcctgacctcaagcgcggcaacttcaccgaggaggaggatgagctgatcatcaagcttcacagccttttaggcaacaagtacgtgtgttcatctcaatgatactaggatttgcatgcatgaatatgagttgtatcagtttcagtttttatatataaagagctcgtgtttgatactgttctgattgctaaaacggttgtttgttgttgttgttgttgctactcctgtttgatgcagatggtctctgatagccgggaggttgccaggaagaacggacaacgagatcaagaactactggaacacgcacatcaggaggaagctgctgagccgtggcatcgacccggtgacacaccggccgatcaacgacagcgcgtccaacatcaccatatcattcgaggcggccgcggcggcggcgagggacgacaaggccgccgtgttccggcgagaggaccatcctcatcagccgaaggcggtgacagtggcacaggagcagcaggcagccgccgattggggccatgggaagccactcaagtgccctgacctcaatctggacctctgcatcagcctcccttcccaagaagagcccatgatgatgaagccggtgaagagggagaccggcgtctgcttcagctgcagcctggggctccccaagagcacagactgcaagtgcagcagcttcctgggactcaggacagccatgctcgacttcagaagcttggaaatgaaatgagcacctcctcctctgtagtttcttctttcgttttgtcacttggatattggttagcttttcttctaggtgaaaacacacagagagagagagagagagagagagagagagagataacatctcctctgctgctcttgctgctccattttgtctctgttgtaattaccatatattgactaatcatgacaaataatacttgatgctaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0538400, RefSeq:Os09g0538400