Os05g0299200

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Revision as of 10:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0299200| Description = Conserved hypothetical protein| Version = NM_001061663.1 GI:115463056 GeneID:4338341| Length = 4994 bp| Definition ...")
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Gene Name

Os05g0299200

Description

Conserved hypothetical protein

Version

NM_001061663.1 GI:115463056 GeneID:4338341

Length

4994 bp

Definition

Oryza sativa Japonica Group Os05g0299200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:13356155..13361148

Sequence Coding Region

13356155..13356229,13356352..13356483,13358286..13358378,13358464..13358623,13358739..13358848
,13359527..13359582,13360383..13361148

Expression

GEO Profiles:Os05g0299200

Genome Context

<gbrowseImage1> name=NC_008398:13356155..13361148 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:13356155..13361148 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgtcgctgccaccgcgccggcgacctccgtgaccgccgctaccttctcgccatccctcccattgctctctcgctaccaactcccccgcgcccaccgggccgcgtccaccgtggcgttcgccgcgcgccgcttccgcggcgtaaaccctagcagcgaccgcccccgcgggaggcgcgcctccgtcccggccgctcccaccacctccgccgcccgcgacgacggcggcggcggcggcggcatcgatgccctcgaggcggagctctggcgcctccatcgccgggcggagctgcgccttcaccgcctcgccgccgaggccgacgaggcctaccgcgacctccgctactccgcccgcgtcgtcggcggggaccgcgtcgtcctcaccttccgccgctcgtccctgcgcttcgccgccgccgcgctcctctggtcgctcgcgctctccgccgcggcgtgggcgctgctggggtgggccgtccgcgcctggcagcggcggggcctggggtggcgcggaggggaaggcgcggccgtagtgcggaggagggaccgcagcctgggtggcaaggaggtggtggtcgctgtgtcgtcgtccccggtggcggctccagtcagccgtgtgcctgagccggcaagagaggtcaagaggagggaaccaaaggcaaggcttccggaatggtggccggaattgagagaggaggtggtggtggatcaggggccagggatggaaaagtgggcgagattagcgaatagattggtccgagcaatcattgataatagaatcacggggaaggattacaaatatgatgatgcaattcaactaaggcaattatgcaagatatcaggtgtaaaggtctcttttgacacagagaatgctcgtgattctttctatagggcggcaataaactttgttctggatgattgcagcagagcagcacaagacattggagcagcacaaatcagtggggagaatccaaggaattttcttgctggtcttgctagcaatattggattggataaattccgtgctgccacacttgtttgtgcatcagttgctgctcgcacacgttctttgttcttgcaatgctgggcactagagatgcaaggaaaacggtcagaggctctagatgagctctcaaagatttgtagaattcataacatgttccctccagaggaaaattctgcggaaatggaaatggttgctggtggacttaagaagaatttacaagttgcggaaagggttcatctcttatctctatataggagcatctgtactgctggtaatatcagaactgctgcagaagctcttggcctgggcaaattaaagctccctgatacaactaattgttatgggtggggagtgggccttcaacgggatgatgaggtctag</cdnaseq>

Protein Sequence

<aaseq>MAAVAATAPATSVTAATFSPSLPLLSRYQLPRAHRAASTVAFAA RRFRGVNPSSDRPRGRRASVPAAPTTSAARDDGGGGGGIDALEAELWRLHRRAELRLH RLAAEADEAYRDLRYSARVVGGDRVVLTFRRSSLRFAAAALLWSLALSAAAWALLGWA VRAWQRRGLGWRGGEGAAVVRRRDRSLGGKEVVVAVSSSPVAAPVSRVPEPAREVKRR EPKARLPEWWPELREEVVVDQGPGMEKWARLANRLVRAIIDNRITGKDYKYDDAIQLR QLCKISGVKVSFDTENARDSFYRAAINFVLDDCSRAAQDIGAAQISGENPRNFLAGLA SNIGLDKFRAATLVCASVAARTRSLFLQCWALEMQGKRSEALDELSKICRIHNMFPPE ENSAEMEMVAGGLKKNLQVAERVHLLSLYRSICTAGNIRTAAEALGLGKLKLPDTTNC YGWGVGLQRDDEV</aaseq>

Gene Sequence

<dnaseqindica>4920..4994#4666..4797#2771..2863#2526..2685#2301..2410#1567..1622#1..766#atggccgccgtcgctgccaccgcgccggcgacctccgtgaccgccgctaccttctcgccatccctcccattgctctctcgctaccaactcccccgcgcccaccgggccgcgtccaccgtggcgttcgccgcgcgccgcttccgcggcgtaaaccctagcagcgaccgcccccgcgggaggcgcgcctccgtcccggccgctcccaccacctccgccgcccgcgacgacggcggcggcggcggcggcatcgatgccctcgaggcggagctctggcgcctccatcgccgggcggagctgcgccttcaccgcctcgccgccgaggccgacgaggcctaccgcgacctccgctactccgcccgcgtcgtcggcggggaccgcgtcgtcctcaccttccgccgctcgtccctgcgcttcgccgccgccgcgctcctctggtcgctcgcgctctccgccgcggcgtgggcgctgctggggtgggccgtccgcgcctggcagcggcggggcctggggtggcgcggaggggaaggcgcggccgtagtgcggaggagggaccgcagcctgggtggcaaggaggtggtggtcgctgtgtcgtcgtccccggtggcggctccagtcagccgtgtgcctgagccggcaagagaggtcaagaggagggaaccaaaggcaaggcttccggaatggtggccggaattgagagaggaggtggtggtggatcaggggccagggatggaaaagtgggcgagattagcgaatagattggtccgaggtgaatgcctgttttatattagctagtctttcattggatgcaccttggttgaaaattaaatacgcgtaacatatgggaaactgagaacaaatccataattcatttgtggtggtaacatttgggatactgagggtggtgttaacatctttttatttgttatgatcatcactcatgctaagttactaatagatgataacaatgcaaaaactgcaaaaaggttttgttttggatcccattcaattcatcattattaggagcatagtctttgaattttcagaaatatgagaatggatcaggtcatgagagcttgttagtaataacttttccaattgctatgcttcagtaccgattcaagaccaaatcgtggtataatcttcaaaagtcaatctttattgttttatggcatcgagcctaaccaattctaagatttctatcaaaatggaaatgtgaattcttctgctattgtattgtcatatgtgaagtttggcaatagtttgtttttagctactagcttattttttggcattttatagaatataagaacactcatcgttagtatgatgatccaaatagaaaatattcatccttaagatttgttatgatcatttgaataatctcctacaatacctctttcccctgtcttttgaacaaatatggttttatgtggtaggttatacaaaatagtaaatacctaataatcttaccttttttgttggcaggtaatttataccatctttcaccatattcatgagaaacttgctgcttcatttctcagacctttcaatatttccttgtgccagcaatcattgataatagaatcacggggaaggattacaaatatgatgatgcaattcaagttagtattcattttacctgtagtccatagaggatatagtgttatgatatttcatttctgtataatttctatgcttgcaattgagaggcattggcatcctcttcatactatgttctatggattagaaccagactattttaggtcatccatcttatcctgactcttgcgtggatgttgtttgtcatggcagcatgtagttccacttaagcacctattcagccaacaaaatgaattatcttgcttggggcactaacagaaatttgtggacttacctcgtttctgagatcagtgacatatctgaaccatcggaatatgatggctattaatgcaatttattcttgttttgttccctactgttatagaactttcgagctttggagaaagcatcacaaccctgatctgttgtatgaatttatggaatgatacaaatgttaggcattaacatgtcaataaatgaaccctgaatattctagtaatatggtttataggcatgatcttaagatccttggctattctgttctaaatgttgttaaacggatgatttaagatatttttggcagaacactccaaagttatccaatcttaggtgcaccagagatgttatttgaatattgctacagtttatctaatgatagggctttccactcttgcctaattatatctttcttttgaatgtagctaaggcaattatgcaagatatcaggtgtaaaggtctcttttgacacagagaatgctcgtgattctttctatagggcggcaataaactttgttctggatgattgcagcaggtgtatttttgtttttgcttcaacctttgttgctattacctccttttgttttactattgattttattatcatctccattgatctgcactgtgctgataatttctgcttaataaagagcagcacaagacattggagcagcacaaatcagtggggagaatccaaggaattttcttgctggtcttgctagcaatattggattggataaattccgtgctgccacacttgtttgtgcatcagttgctgctcgcacacgttctttgttcttgcaatgctgggtacggatttacctcgattttcaaacctgattgtgtttttacccatctcatggtcatgctgatgttatgtgttcaccgcatgcaggcactagagatgcaaggaaaacggtcagaggctctagatgagctctcaaagatttgtagaattcataacatgttccctccagaggaaaattctgtatgtatttggtttttgttttcaacttggttttgagcattactatttttctgcttacattttcagacacgtataacccttagttgtataacttgtcttgatgcctttacaagttttctgttgtcccaatgcctttacatgatagggtcaaaattttatgttgtgaatttgtttacattctgacagcatattgatatatatccaaactccaatgtagccaagtattaacaccaaggccaactttcctttttggaagagtagacatagaaagccaagcgatttactacagttgttttctgagtctggtgtatgttttagcatgttccatccctgtgcataataccagtagttttttttagtgaatgctttagaaatttaattcaacctgggtactacacagttatctttgttcttactggttatttgtctctagcatgaagcttagccttttttttgtgctagtttcatgatcagttgtgtcataatgttatttccctcagtcatatctgtctacctgagcataactgagcttattttatagagtaaatttcacaaaaccacagggttctataatttttttttaataaaaccccagctgttgaggcatgagtataacaaaacccctatttctgtcagctgtaaacatgggccgtacctctcagcttcacctttttcttcctcatccctttctcacgttcctttctagcagatcggatctgagcaaacagcaggtggtggtcagcgcatcgctcctcttccttcctccccctccctctcttctgccacctgccactatgcacacttgcccttctccatcactgcaaacatcagcagcaagaaattagccccgacagcaactggtatacagagctagcagctcgtgcaatatgaactcccaaaaaggcaatttatggaatttctccaggaaaaccaacaagaagcgaatcattgagcaatcaaccattatatatgaattagctatcacatttttaggggaattaaatcaactgttgtcatttgcaaggaaaaaaaaatcagttacaaagacaccctcttcctaatcttcagagcagtgaggcaagcaatggagtcattccttgatgcacagcgacagcgaggaggacgagagcagtaaggaagtcatcggcggcgctggcagtagtgctttcttggaatggaggtagagctcacggggcaaattcaccagatagtagtccaacatgagaattgatgggagaggcttgagcttgggcaatctgcagatgccatgtcgttgatgaagctgtccagctcccaatttcctgccgtgcaaccaccctgtgttcgacctcacttcacatgacaccttagctctcaccatgctgccacaggtaggaatggggaagaaagtgggggctttggggctaatgaacagggaccaccaccacctgttagttgacgggaattggtggaagtgggttctgtgttacaatttgccccccagtctgttgtattgtgaaataaaatgtataacctgtggttttgtgatatgtgtgcctcaaaacctgtgatttgtgaaatttactttcagaaagatatatatgcttctgagattgtcattgctattatatgaacagattctaactgaatttttttgagtgaatgagaccattttttgtgctgtatgcatatgcatgcaaataaccttaatataacaaaaaaaacaggttttatatttttcgcaattttcaatgttatttctgcatattatcctcttaatggaaacatatttatgcaactttttgtttctttgtcccctacaggcggaaatggaaatggttgctggtggacttaagaagaatttacaagttgcggaaagggttcatctcttatctctatataggagcatctgtactgctggtaatatcagaactgctgcagaagctcttggcctggtaagtaatagccatgacccatgatttattttggagtagaacaatatatctgctatattatagctcaataaagtgaaaattctacacctgagtgtaaagtgtgctgttgtttgtctgtttagggcaaattaaagctccctgatacaactaattgttatgggtggggagtgggccttcaacgggatgatgaggtctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0299200, RefSeq:Os05g0299200