Os05g0540100
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0540100 |
|---|---|
| Description |
Flap endonuclease-1a (EC 3.-.-.-) (OsFEN-1a) |
| Version |
NM_001062714.1 GI:115465158 GeneID:4339464 |
| Length |
4018 bp |
| Definition |
Oryza sativa Japonica Group Os05g0540100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:26891420..26895437 |
| Sequence Coding Region |
26891680..26891751,26892247..26892301,26892406..26892450,26892530..26892588,26892666..26892774 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:26891420..26895437 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:26891420..26895437 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggcatcaagggtttgacgaagcttttggcggacaatgcgcccaaggcgatgaaggagcagaagttcgagagctacttcggccggcgcattgccgtcgacgccagcatgagcatctaccagttcctcattgtagttggaaggacggggatggaaaccctcacgaacgaggccggtgaagtcaccagtcatttgcaaggtatgttcaaccggacaataaggttgctggaggcaggaatcaagccagtatatgtttttgacggcaagcctcctgatctgaagaaacaagagctcgcaaaaaggtactcgaagagggaggatgccaccaaagaactaacagaggcagtagaggaaggagataaagacgcaattgaaaaattcagcaagagaactgtgaaggtcacgaagcagcacaatgaagaatgtaaacgactattaagacttatgggggttcctgttgtagaggcgccatgtgaagcagaagcagaatgtgctgcactttgcataaatgatatggtttatgcagttgcatcagaagatatggactctcttacttttggagctccacggtttcttcgtcatttgatggatccaagttccaagaaaattccagttatggaatttgaagtcgcgaaagttttggaggagcttgaactcactatggaccaattcattgacttgtgcatcctatctggatgtgactattgtgatagcattaaaggtattggaggtcaaacagctctgaaacttattcgtcaacatgggtccatagaaagcattctggaaaacataaataaagacagatatcagattcctgaggactggccttatcaagaagctcgacgcttgttcaaggaacccaatgttacattggatattcctgagctgaaatggaatgctcccgatgaggaaggtcttgtagagtttctggtgaaagaaaatggtttcaaccaagatagagtgacaaaggccatagagaagattaaatttgccaagaacaaatcttcccaaggaaggctcgaatccttcttcaagccagttgttagcacatcagtgcctctgaaaagaaaggacacttcagaaaaaccaaccaaagcagtcgctaacaagaaaacaaagggagccggcggaaagaagaaataa</cdnaseq> |
| Protein Sequence |
<aaseq>MGIKGLTKLLADNAPKAMKEQKFESYFGRRIAVDASMSIYQFLI VVGRTGMETLTNEAGEVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRY SKREDATKELTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEA EAECAALCINDMVYAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELE LTMDQFIDLCILSGCDYCDSIKGIGGQTALKLIRQHGSIESILENINKDRYQIPEDWP YQEARRLFKEPNVTLDIPELKWNAPDEEGLVEFLVKENGFNQDRVTKAIEKIKFAKNK SSQGRLESFFKPVVSTSVPLKRKDTSEKPTKAVANKKTKGAGGKKK</aaseq> |
| Gene Sequence |
<dnaseqindica>3687..3758#3137..3191#2988..3032#2850..2908#2664..2772#2354..2435#2156..2240#1965..2084#1834..1884#1604..1669#1363..1410#1209..1256#1045..1099#910..969#770..828#224..340#77..88#gaaatagcccgcgacctctctctctgtgtctccgccgccgccgcctccgccgctcgccgcatccgtcggaggcgagatgggcatcaaggtgagcgcgggagggggggggggtgccgcgccgtcctcgttcggatttgtgaccggtggtgtgggttgtagctgtttttgcggccgattcgtgatgggttttcgtctcgattttgtgcgggtttttttttgttagggtttgacgaagcttttggcggacaatgcgcccaaggcgatgaaggagcagaagttcgagagctacttcggccggcgcattgccgtcgacgccagcatgagcatctaccagttcctcgtatgcccccatgtctcctctcacattctgcgagttggctttgaaatgtgctcacttacttggggtttagggtttcttaagcctttgattgcgcgagagagattgtatttttttctatttaactgcccagtgttgtaaggattcctcatttcaaattgctctcttagaccaaatcgggttgggtgaaattgggatacctccattgtgcctcatattttcttctttggtcggctatatttattaacattaaactaaacacctctagcattggatgttttgctttaaaaatgggagtagagcatagcaattccatattacattcactatatgttctgtgtgcaaatgcttgacaagttttggtgaggtattaggaaatccttacccactgctttataagttgggacagctttttatgttttacttgtatagattgtagttggaaggacggggatggaaaccctcacgaacgaggccggtgaagtcaccaggttctaaatattaatcttacaccgtttctagtgctaggattctgttaattcttttataaattagaactttttgctgtgcagtcatttgcaaggtatgttcaaccggacaataaggttgctggaggcaggaatcaagccagtgtaaacccaaattcctcatgtgttgttattgaaattatccatataaatacacttaaaattgtgacactcatgcagatatgtttttgacggcaagcctcctgatctgaagaaacaagagctcgcaaaaaggcatgatatgtttctttcatccttagattgtttttcctgctgctacttataacttgtcctatatcccattttgggctatgatctgtttctaacatggcatgttctgcaggtactcgaagagggaggatgccaccaaagaactaacagaggcagtagaggtgagctaacagtttgttgtgctatttacaatgttctattatgttctgtcctgtgcttgttctccttccttccttgatccccagagaaatgacttttaatgtgcaggaaggagataaagacgcaattgaaaaattcagcaagagaactgtgaaggtgagaaggggggttgatcttacacactaaaagaaatgtaaaaaaaaaatctatgatgtttgagggacaacagattcattcgctgagaaaaatatcaatgaaaacagttggtttgaataacatgatatggaagatgcaaaaaaggtaagtatgagagtaaccttatctttgcatcttctttttccttgagcaggtcacgaagcagcacaatgaagaatgtaaacgactattaagacttatgggggttcctgttgtagaggtaaatccaattttctttggtgccacatgctttttcagggaatgagtcaatatataatcgttggatttgtttattttactatgctagcataaaatctatgatttatcatgtatttgccatgctctcaatctcatccaaagacatcttctttccggtaccaataggcgccatgtgaagcagaagcagaatgtgctgcactttgcataaatgatatggtaatgttaacatagtggacttctgccttcttgtttccatctcttgcttccatttttattaattactgttttttttataggtttatgcagttgcatcagaagatatggactctcttacttttggagctccacggtttcttcgtcatttgatggatccaagttccaagaaaattccagttatggaatttgaagtcgcgaaagtatgcagcactgtgatttgcttggtacagacactgatgttgtacacacttgaccaattttcatattgcaggttttggaggagcttgaactcactatggaccaattcattgacttgtgcatcctatctggatgtgactattgtgatagcattaaaggtatttttgctttccctcttctcatgagtagtattcctataaattcttgcttgcttgaatttctgtccatgcaaactttttttcctaaccaactatgtgtgcttgtccgctaggtattggaggtcaaacagctctgaaacttattcgtcaacatgggtccatagaaagcattctggaaaacataaataaagacaggttaatcttttgaactatttgaatatttcccacttgactgagaactcaactgagacatgtatatcagctgtgtggcaaaggcagcccaaaattttctatatgtgccactttatttcatttcttggtcgcattatcttacttagatgtaatgatgtattgtaatgtgatgaagaccatttcctatgctaatttgtgctaaattttgatcatatctatcgcctactgcagatatcagattcctgaggactggccttatcaagaagctcgacgcttgttcaaggaacccaatgttacattggatattcctgagctgaaatggaatgctcccgatgaggaagtatgcctgtcacctttttttccttgccttcaaattttacaagtgatgtcgtcccaatactttaattctttctccagggtcttgtagagtttctggtgaaagaaaatggtttcaaccaagatagagtgacaaaggcatgcacttttcttctgacttactatgttatattcttgaaatatttttatcagcaatttgtttctccggtttatgtaggccatagagaagattaaatttgccaagaacaaatcttcccaaggaaggtgagacgtgagcattgtggtacatttttatactttggttctaagagtgttgcatgcctatatcatttgttaaaccataccaactcttgaattaatgtgaccaggctcgaatccttcttcaagccagttgttagcacatcagtgcctctgaaaagaaaggtaccttaacctgaatgccatcaatcttgtcgtgcttaaatttagaacttttagccttctccaggttcatccattgtagcatgatatacaaccaattcatgtcattgaattgcgtactttatctgtccattcaactaacaatgttgaatcacgtggtttgatgttttgattgtccaatgtacctgccaaataacagatcacagatgaatgataaaaatatgtccattagaccagtactcaacaatatatttgcaagcagccagaagtaggcagatacaatagccaaagctgaatcttgtaagccatgctaaaatccttctactatgagaaggttatagccttgtttggcatgattttctcgcagatcttgtactgttccatgtaaaactgcaaccatagtgctatactatatgtaggcttgcaaatgttgtggccataattatatttttgtagcaatattatgtctcatgatttgtttctatgatataatggcaggacacttcagaaaaaccaaccaaagcagtcgctaacaagaaaacaaagggagccggcggaaagaagaaataagttcgattgtgccattcatcaacaagacctcctgcacgtgtcatttcaattttaactcccatgtttgtaactcatcctccatctgatgttttctatgttcctagtaaaccagaagtccagaacttcgtctaatactagttcatctatgtagtacgtctctcttctctactagggatttgtagtgttggtttggttgctgcgtagtgtatgaagaaccaacaaaattggctttgccgcgcaaaattaactggttccgattc</dnaseqindica> |
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