Os05g0540800
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0540800 |
|---|---|
| Description |
Homeodomain-like containing protein |
| Version |
NM_001062718.1 GI:115465166 GeneID:4339468 |
| Length |
7151 bp |
| Definition |
Oryza sativa Japonica Group Os05g0540800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:26911109..26918259 |
| Sequence Coding Region |
26911227..26911340,26911432..26911527,26911853..26911918,26911999..26912058,26912142..26912198 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:26911109..26918259 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:26911109..26918259 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggacgcgaaggacatcctcggcctccccaagaccgccttcccgtccgtccaggagaagaagccccgcgcgcccaaggagccgcagcggaagcccgatggcgtctcgcgcgaggtgtacgcgctcactggaggggtggggatggctccactcatgccgaccatcgaggcttcgcacctgaagcggcgaccagctgttgagaaggagaagatagcatggcagtggctacctttcacgtcctctgcacggactgacaaccttcaactttaccattgggttagagttgtaaatggtgctccacccactggtgactatcactttgcaaaatacaacaagaaggcggatgttctcaaatacaccgatgaggagtatgagaagtatttaaccgatcctgcatggagcagggaggaaacagataaactatttgaactatgtgaacgctttgaccttcgcttcatagtaatagttgataggttcccaactgatcgcagcatggaggatttgaagagccgttattattctgttactcgtgctcttctgattgctagagctcggtcatttgatgaagttgctggtaatccccttgtgaaggaaacattcaatgctgctcatgagaccgagagaaagcgtgctttatctgcacttctctcccagacaaaacagcaagaacgaaaggatgctgagattttagcagaagcaaaacgcattatggaaactcgtgctgctagcaaacatactgaggaagcgggagcactggcacactttgataatgttgatggtgtatctcccttgagcaacacacacccattgtcaactgctacacttccagctgcagcagtgaataactccatacctgcttcactgcgaatgcttcgagtgtatttgagaacccaagcgcttgatcaaatggtccaagcagcaagtgcctcggcgggccttagagttatcaaaagggttgaccagactttacaagacctcggggtgaatttgaagcccaaggtcccgacgaaagcagtttgcgtcgagcatcttgaactacggaatgagatacttacactgcttaacttacagaagcagctgcaaaataaagaagctgaagtttcagctaacagagaaaattcctttacagaggcaccaagcacacctaagcgtgctaatagagatgttgatagaccctttgttcctgatactgttgggtttgcaggtgagagagcaggcaagcgggaccacaagcggaagaccactggaagatttatagatgcacctccctcaccaccccagtccaagaggcctcggaagttgaaagcatctgattga</cdnaseq> |
| Protein Sequence |
<aaseq>MDAKDILGLPKTAFPSVQEKKPRAPKEPQRKPDGVSREVYALTG GVGMAPLMPTIEASHLKRRPAVEKEKIAWQWLPFTSSARTDNLQLYHWVRVVNGAPPT GDYHFAKYNKKADVLKYTDEEYEKYLTDPAWSREETDKLFELCERFDLRFIVIVDRFP TDRSMEDLKSRYYSVTRALLIARARSFDEVAGNPLVKETFNAAHETERKRALSALLSQ TKQQERKDAEILAEAKRIMETRAASKHTEEAGALAHFDNVDGVSPLSNTHPLSTATLP AAAVNNSIPASLRMLRVYLRTQALDQMVQAASASAGLRVIKRVDQTLQDLGVNLKPKV PTKAVCVEHLELRNEILTLLNLQKQLQNKEAEVSANRENSFTEAPSTPKRANRDVDRP FVPDTVGFAGERAGKRDHKRKTTGRFIDAPPSPPQSKRPRKLKASD</aaseq> |
| Gene Sequence |
<dnaseqindica>119..232#324..419#745..810#891..950#1034..1090#1390..1519#2040..2107#2202..2294#2399..2446#2808..2945#3402..3512#3664..3759#4905..4976#5854..5908#6004..6038#6517..6594#agagctcagctcgacgcaacgcagacgcaggcggcggcttcggcctacctcgatctctctcccatggcgcactagaccaaaaccctaaccctaggtccgcctcctccgtccggcggcaatggacgcgaaggacatcctcggcctccccaagaccgccttcccgtccgtccaggagaagaagccccgcgcgcccaaggagccgcagcggaagcccgatggcgtctcgcgcgaggtacggcgcggcctaatccgccatcctcccgcacacttcgaccccgcgtttctcgttgctgctgaagtgctgatggttgttgatgatccaggtgtacgcgctcactggaggggtggggatggctccactcatgccgaccatcgaggcttcgcacctgaagcggcgaccagctgttgagaaggagaaggtgagctgatatgtgctgaaaatttgataactctagtagaagcacatgaactgagctgagagtttagctactcgtatacttaatacctattaggaattaggcattaagggtaaggtgctcatgggattaatatgggacaaatgaaatgatgatttgatcatgtgcaacttctgttttgaaattggtggtcaacccaaataagcagattgaatccacctcacatattcatgtccattgagtcatatgggtaattgcagcaaggtgtttcgtgctcccattttgatggagcttgtactaaatctgaccatttgaagtacttctgcagatagcatggcagtggctacctttcacgtcctctgcacggactgacaaccttcaactttaccattgggtctgtttctcatgaatttgtagtatggcatacatatcttagaaaaaaaaactcagaaagtcacccttttgatctttcaggttagagttgtaaatggtgctccacccactggtgactatcactttgcaaaatacaacaaggtaagaagtatattgtgttgggtacatccttcatatcctgcattgatgcttactcagtttttgcttgttttttcctattgcagaaggcggatgttctcaaatacaccgatgaggagtatgagaagtatttaaccgatcctgtaggtactagttgcaataataaatttttataaatgctatgtttgatcttttgttgaaaatcttatattgctaaaaaccttctgtggatatcattgcgctcttgaatacaattgataacaatgttgggaagttcgaaaattatacataattatgttatcatctcatctttatatgcttgttatgtggcatttgagcattcatttcgaatagttgcaagcctttgtttgaaaatattatatttgcaaacaattttattgaaagcccttctataaataatcagttgttgatttcatttcaggcatggagcagggaggaaacagataaactatttgaactatgtgaacgctttgaccttcgcttcatagtaatagttgataggttcccaactgatcgcagcatggaggatttgaagagccgttattattctggtaccttatatcttgatataacctctatgcttagatagtgtccaccacagaaaattctcctttgttgttaatttttaatgttctacacatgcatttacttggtcaaaaaccaacaagtgatttactgtggttatcatatccatttattttcccattcaatatatgaaacaagaacagttagtaaattgtcagctccgtaaccgttccaccgaatttgtttttatcataacagccagaatattgctcacattacttatgtataatggggacttaagaaaaggttacacgcacacaaattgatataagcaatattctggtcattgtcccattatacatcccctgcccttcttttatgagaacaaggtgattgcatggcttgttatttagaataatcagtcaactgctgaagctgccaattattatatttcaagtttggtataattctatgctcaacaattcagtctgtgcattactatttgcttttgtgaattctacaccagtatattctttgttattgcagttactcgtgctcttctgattgctagagctcggtcatttgatgaagttgctggtaatccccttgtgaaggtacatgttgatctaacctatgaataattgagtaattgttttcttattatgtttgcccttgtacttatttctgtccatatgggtttcttctcaggaaacattcaatgctgctcatgagaccgagagaaagcgtgctttatctgcacttctctcccagacaaaacagcaagaacgaaaggatgctgaggtgagaaatttgttgatgatagtattatgagcagctgacttgtgcagtttatcattccttagattccaatgttttatgtctgattacaagtgttaccttttcagattttagcagaagcaaaacgcattatggaaactcgtgctgctagcaaagtgagtaatcagcacatttaattccatacatctcaccacaaaagtaatctcaagcaagaatgttctggtggcaatttgcattatattgcaaataatgagtttttttttagaattccttctgtgatgcaagagatgtcaaatcatctagatatctatgagactccgatctgttcaagcaaatagcgcttagccttttgggctttcccagatgcctgctgtcatgcagggatgatagtgttgttcactaataaaccttatgaattttgatggtagttagtttgaagtgatatagtctgcctgatctatctgatcagtggtctggaatttacatgtctctaagcgtttgaggctttgtctatagcatactgaggaagcgggagcactggcacactttgataatgttgatggtgtatctcccttgagcaacacacacccattgtcaactgctacacttccagctgcagcagtgaataactccatacctgcttcactgcgaatggtaactctgaaactatggattgttgctttctgtctcttatattgagctgccgatgagttaacattttgtttgttacagtagacattttgttctatttatttaaagctaaccatattttgccccattctgtggaaaccacattgtcctatccttcatcttaccatgccataatgtcactattaaactaagtgtaaaattatgtttcctgagcaattatagcatgtcccatttattcctgaaaaacaaagatagtgtaagttatcttgctcattgcatgggaggtggctgttattaggattgtgccgaactcatcacaagcagaccttatgttaattatattactagcggtcttgttctcattaactgtggatgcctatgaatcacatgaaaattggtatatcactcttcacactgttctttttagatgttttttactcgctatacattcttttacagcttcgagtgtatttgagaacccaagcgcttgatcaaatggtccaagcagcaagtgcctcggcgggccttagagttatcaaaagggttgaccagactttacaagacctcggggtttgtttcctagacatcaatctgtacttgatatgcaccgaactgatgttgttcaagttctttttgggtctagtaggtttgcagtgcattttcttttataatttaataacacaattagatacatgaaattgtatgcattgtttctctgtaggtgaatttgaagcccaaggtcccgacgaaagcagtttgcgtcgagcatcttgaactacggaatgagatacttacactgcttaacttacagaagcaggtacatttaggaagcttgcgataaccatgctgctcctgaagttagcatttcttagagtagcgattagcaacatgcttttaatctacaatttgcacttaggcttccatcccaaatgtatgcactgttttattgaagcacctattgaagaatatcattaaaagatgggaaatcgatgataaatgttggttatagcgatttactttcttgagaaaattaggtatatacaaaatatcttccctctttagataccattgtaattgaaacagttaggttcactttaataacttcacaaatctcctccaagtaccttcccttgcctcctatcactcctcctaacgcataaaccaaccccttccccataaagagcaggctgacataatccccaagcaccttgacccaccctcccttcccacctgcttctctgctgagagcacacgccactgttgtccccaaggaagttctatcacaagcaaacaccttcctgttgatagagtgccagcactgcttggtcattttagcattctagggatatatgtggtattactaggaattagatgcaagcattacaacttcactaagcttgcacctcacttgtagagttcacacgatcaccgttacagcgcagtcatccagaaggacaccatgaggtgtgtatcgtggtagcacgtccagatttcgtctgataggtgctctctcaaatggtatcggcagtgttgtatttgtagatagtgtcatgcctcggcaaataggttccccattaggccttgtttggcttagcttgttgccattcagaggtcaccgctttatctaaatcttactagtactatcttccaatgccaataaagtgtaccacgaaagataaatggcatatactcagatagtgctaaggtggtgggtcttttggtagagaaaccaaaatttccaataatgtgatggaattgaaccaaacccttatggagagatgacaagaggcaatggaatggtattttgaggaaattttgaaatttgggtggtattaaagcgaactcatttatttcaatggtgtatatacaaagagggaaagtttttatggtatatgccttatttgctctaatttctttcctttcatctaatacatcattatcttttgcctttcgtgttaacagctgcaaaataaagaagctgaagtttcagctaacagagaaaattcctttacagaggcaccaagcacacctaaggtatatttctacataaatggacccccttcacagaagtatggtaactagctctttctctagtatgctcactttggaatgttggagtgctttaacagctaacagaactagaaaatcttagtgagatctttttgaatgaataaaatgtgggatagtaaggagggacttagcatctatgactgataaagaagaaaattggcgagagaacctgtctgagaggacttgaacacaggctggcccaagctcctggcagcttcatgaccactgggctacaatgctgttcttataaaatcttagtgaattcttaacaggatagtgccaagcagtggcaactgaagctcactttcaatacatgaagatttatgcctgtgatatttatattaatttaagggaaaatccataaacacttccataagtggacaaagtattcactcggggggtgttttgggacatggggggcaaagtgagaaggcagggtttttcaaactttcccttgatttaagtagtttgcctaagagcccgtgcattgcaatgaaaaacaaattaagtttctagcttattgaatcaatcaataaacacttatttagtctaagtaatactatgatttttcttattgaacaagtagataattttgaaatttggggggagccaatagtgaaatgggggaggatttgttgaaaggtggtgcaatagtatagattgtggggcccaattttagtggtaggggtggtgtgggaatagacaccaccactaccaacattttaactagtatagatatagaaaactttaatcagaaccagttaatatgagtatatgattgaaacaaaaagtttattaaactgttagttgctctttagctaataacattgtttgtttgcagcgtgctaatagagatgttgatagaccctttgttcctgatactgttgggtttgcaggtaatttggaaaaatacattttggtttgctttcttcttgcctcttcaatcttatcagggactacttatacttttttttgtttcatgttacctcaggtgagagagcaggcaagcgggaccacaagcggaaggtttgttctttctcatcctctctgtgatgatgttcttaatatagtttcatctttaatgtgtgtctgtgggacatcctgctgaccttctaaatatctagtttgaggggagacaaaattgaattgagacatagttcaactgctctgattttctgaaatctatccatttgtactttaccatcctgataggacatgcagacaggaactatatgttgattttacttatgtgtggcaataccatttaaaacatcaaacaagatgcttcagtgtgttggatcatccagtatcaaaatgaagtgcaatctctattgttaatggccattttggttgaagttgacagtcatattcttgctgtcctaaaatgtttgcattctggaatgctccatattttagaattcaatcagggacttgttttcttctataaaactatatgattacttttacttggttttatcatttacatctgtaacattttcgccagaccactggaagatttatagatgcacctccctcaccaccccagtccaagaggcctcggaagttgaaagcatctgattgatgagtttcagattgagctgcatagaatttcaacaagccaaaacccctggtatgccttactggcttgaattgaacttgcacttgaatacttgatcatttgttgctcgcttcatggttgacaactggaccttgtgtttcagatagtgctatggatcaactccattcttgcttggaagcttcccggcgtgcactttcaccaagagtttgctcccgtcggtagaagccgttcttggcttttgtctgtacagtgcatctgccctgagaaggttttcttcgtactcctcgttggaagatgagacgaatcaggtggaagcagctgctggcgtcactgagaagtgatcgccttgagcccttgacgtctccccctactcaacgaagagtgtaactgtttcttttgtttgtttgagctgtagctaccgtttgtaaaatgagttatctgacaataccgtgtttgttcaagtagaactgtaacacaactgtttacacccaatcaatcctgtaatcttggacaatttaacgaggaaccgcgatcccaatgcaaacctgagcctggtttcc</dnaseqindica> |
| External Link(s) |
