Os05g0546600

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os05g0546600

Description

SMAD/FHA domain containing protein

Version

NM_001062754.1 GI:115465238 GeneID:4339504

Length

1582 bp

Definition

Oryza sativa Japonica Group Os05g0546600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27186922..27188503

Sequence Coding Region

27186922..27187016,27187379..27187426,27187545..27187590,27187694..27187764,27188464..27188503

Expression

GEO Profiles:Os05g0546600

Genome Context

<gbrowseImage1> name=NC_008398:27186922..27188503 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27186922..27188503 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcagctacctttttggaagggaacggaaagttgcagacatccccatagatcatccctcctgcagtaaacaacatgcagttcttcaatatagacttgtagagaaggagcagccagatggcatgatgtcaaagcaagtgaggccttatctgatggatcttggtagtaccaatggaactttcattaatgagaatcgtattgagcccagccgttactatgaactctttgaaaaggataccattaagtttggcaatagtagccgggagtatgttttgcttcatgaaaattcgaaagaatga</cdnaseq>

Protein Sequence

<aaseq>MSSYLFGRERKVADIPIDHPSCSKQHAVLQYRLVEKEQPDGMMS KQVRPYLMDLGSTNGTFINENRIEPSRYYELFEKDTIKFGNSSREYVLLHENSKE</aaseq>

Gene Sequence

<dnaseqindica>1..95#458..505#624..669#773..843#1543..1582#atgagcagctacctttttggaagggaacggaaagttgcagacatccccatagatcatccctcctgcagtaaacaacatgcagttcttcaatataggtaagcatagcaatcttattgttatttgcctttattagcatattgcctgtgcgtggcaacaagattttaaataaagaaaattatcattaactcattattattatcattttctgtgtatatcgccccttaatttatgtatatatttgttactgacatgtgcactgtccttttcttctcacaaaaagtaggaagttggtggtaggggtggttgacatgtaggccccccttttctattaaaaaaactagggagctggtggtggggtggtggtagattcaccactcaccatcaccactactcccttttacaagaagtatatattgagaaataatattgtgattcacccatctctttgccttttcagacttgtagagaaggagcagccagatggcatgatgtcaaagcaagtgaggtactccttgctagtaatgcatataattttttttaataacaagtactaataattcatgattatcttagttctgtatgctactctagattatgatgttttttgctgctttgtttgataggccttatctgatggatcttggtagtaccaatggaactttcattaatgtaagtcctccaatgatacttttactactaatcagatacactagtcgcgtttctaataatattttctacccagtcaatatttatgttttgatttttttttcaggagaatcgtattgagcccagccgttactatgaactctttgaaaaggataccattaagtttggcaatagtaggtatgatcattgaaattgaagagtaactttccccctctactgtttaagataactttgcttgcttcatgccctcatcatatcaattaaagaaagcatcacttttttgtttatttattgctcaatgtatatgcatctttggtatgtgatgacttaaattaacaacttattatgaaagtgacagtctggcttttggcattctctttagttagagattttattttgatttgtggtactcttgggataaacattttttctccaataatctaagtaatatctttgtaaactacgcctaattgtttttctcaatacaatttccaaatgaatctttaggtggtatattaatgtttataaatatcaaggaatctcaaaatatctacattatggaaacataattttcctttatggagccttgacttgcaagctcaatcatgtataaatgtataacatatattcagagctgtggagattttgaagtttgcccatagtgccccttcctagttcatacggttttcatccttcagaagcctcatctttttgttcttagatggatggtactatttctaatccagatttagggtccttttgagtccagttgcccaaaagtaaataatataatgatgtgatgcctccgcttctatatgcctccttactaaccccgttcatctaaaatatgacaaatgttttattgtatttttgcagccgggagtatgttttgcttcatgaaaattcgaaagaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0546600, RefSeq:Os05g0546600