Os05g0551500

From RiceWiki
Revision as of 20:14, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0551500

Description

Protein of unknown function DUF1639 family protein

Version

NM_001062783.1 GI:115465296 GeneID:4339533

Length

1908 bp

Definition

Oryza sativa Japonica Group Os05g0551500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27493867..27495774

Sequence Coding Region

27494928..27494942,27495038..27495097,27495215..27495772

Expression

GEO Profiles:Os05g0551500

Genome Context

<gbrowseImage1> name=NC_008398:27493867..27495774 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27493867..27495774 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcctcgccggcggcgacggtgaccccggctgccgcagcaatgtcggaggcgccggcggtggcggcgccgaggccgagggaccctgggttgttcggaagcttcgacctccccgccgcctgggggtgccgcaggcccatggctttctgcagggaccttgacgccgccgccttggtcggctccgaacccaacgccgccgccgccgccgctgctgctggagacgccgtggagcccaagcgtaacgcctcccgatcgccgcccaaaggaggcgacgctcctgtggcggcggcggcggcgcaggaagctccgcggaagcagtggaacctgcggtatcggaagggcgggcgggacggcggcgaggacgcgctgcagaacaagaagctctggaacatggaagccgccggcggcggcggcggcggcggcgccagggcgagccgcgggttctcggtggagctgacgcgccaggagatcgacgccgacttcttcgcgatcaccggccggaaggcgccgcgcaagccggcgaagcggcccaggagcgtccagcgacaagtcgactcgatttgccctgggaactcgctctgggaggtgagccgcgatcgctacaaggtgaacgagaaggggggattctga</cdnaseq>

Protein Sequence

<aaseq>MESSPAATVTPAAAAMSEAPAVAAPRPRDPGLFGSFDLPAAWGC RRPMAFCRDLDAAALVGSEPNAAAAAAAAGDAVEPKRNASRSPPKGGDAPVAAAAAQE APRKQWNLRYRKGGRDGGEDALQNKKLWNMEAAGGGGGGGARASRGFSVELTRQEIDA DFFAITGRKAPRKPAKRPRSVQRQVDSICPGNSLWEVSRDRYKVNEKGGF</aaseq>

Gene Sequence

<dnaseqindica>833..847#678..737#3..560#caatggagtcctcgccggcggcgacggtgaccccggctgccgcagcaatgtcggaggcgccggcggtggcggcgccgaggccgagggaccctgggttgttcggaagcttcgacctccccgccgcctgggggtgccgcaggcccatggctttctgcagggaccttgacgccgccgccttggtcggctccgaacccaacgccgccgccgccgccgctgctgctggagacgccgtggagcccaagcgtaacgcctcccgatcgccgcccaaaggaggcgacgctcctgtggcggcggcggcggcgcaggaagctccgcggaagcagtggaacctgcggtatcggaagggcgggcgggacggcggcgaggacgcgctgcagaacaagaagctctggaacatggaagccgccggcggcggcggcggcggcggcgccagggcgagccgcgggttctcggtggagctgacgcgccaggagatcgacgccgacttcttcgcgatcaccggccggaaggcgccgcgcaagccggcgaagcggcccaggagcgtccagcgacaagtcgacgtgcgtgtgcagccatagatggagcacgatttcttcatccgccacccacgaattctctccttcttcttacttcttctttcgattgctgatcacttccctgctttctcttctccgcagtcgatttgccctgggaactcgctctgggaggtgagccgcgatcgctacaaggtgaacgaggtacgcacaaaagtccaaatctttcatctctttcgccactggttctgggagatttcgagttggtgaattcgattctgattcctgaactgctgcagaaggggggattctgagttgctccaagaaggaggagatggattttccgagaagcaagatcaaccattggcttatcgtagttatagacagagagagattcagactgtcagtcagaattgtttcagtgcatccatgcttatgctgttgatgatgaatcttgtgtagttttttacctgactgttggggttttgcttctcgctttcgtgaagcctctgcaaactcttctttcttttatgcctagttcggaaacagttaacagaaagaatttcaaactcttgatttctggatgtgagacatggatacatgataggttcttcgttaattctgggtggtatgaaatctttggcattggcttcaatccggtaattctgtgttgcatctcgaattgcagttgcagttcctagtagcttaggagtagaacttaaccaggtttatttatcagttctctagtttttgccagaaacacatatcgatttcttccatgtcggtcttccctgtcttttcaggtattgtacatgtctttcttgatttttttttatggattggcttcctgctttttatcagtatttggttacttgaccattcacttcagactgaactatgtttttgaagaaagcagaggattcatgctcagaaactgaagcagaatcacttgaaatgaatgttggattcatgcgaactcaggaccatttgactgttcaaacagtactccagattcatgctgagacttcagaggaaacatttacccaatcaggaaaaaaaacgctgaggtttcagaatgtgtaaacagttccaaggagaggggaaatgacatgagtaagtccaaacctcatgatttgccaatcattattctggtgtactcgaatgttttgctacctttggtattgattgctgaaagtgaccccttaaactatgacattacagatcctgggttttacaacccttttcctttgtcaactcttttctgtagttcacttttatcatttgtgcttgatgtcatagtagcacattgatcttgtttggatgagctcaactgaaaaggagtcaacgtgtcccttggacatttattttttgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0551500, RefSeq:Os05g0551500