Os05g0557600
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0557600 |
|---|---|
| Description |
Ubiquitin-conjugating enzyme, E2 domain containing protein |
| Version |
NM_001062825.1 GI:115465380 GeneID:4339578 |
| Length |
4424 bp |
| Definition |
Oryza sativa Japonica Group Os05g0557600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:27815477..27819900 |
| Sequence Coding Region |
27815833..27816126,27816712..27817023,27817109..27817248,27817408..27817471,27817543..27817989 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:27815477..27819900 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:27815477..27819900 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgacccacgcccccaagggctacctctgcgcggggagctcgtcgttcgatgatcccgacgtggtcgaggtgacgccggcggcggccgcggcaggggggtggagctccggccaccagaagcggaagcggagtcaggttgttcctcatgaagtaattgaactggatgctgatgatgatcctgatggagttgtgattattggtgaaaaatcatcagttgataagaataagcaagctgttggatatcctatagactggctaaagcatgcaaagagtagtttggctggtgaaattgctggcccaagttcctacccatcaaaaaatcctgatatattacttggtggcctgaaaatatttcaagagaacccattttacaacaacattgatgactatgcttatgaggcatttgaagaagattatggttatgatgaagatgagtatgatgattacgattatgatagtacactttatgaaagtgaatataacttcactttggcttccaagtttgatggtttggatatcccacctggtgtggaggctcctttaccatggttgcagacgactgcggcagagatggcaaataagaccaaacctgtgaacatgatggatgataaaattgatgaaaaatacagtgcatttaagcaattcgatactgttgatgatcacagtgatcattattattcgaagccagatttaagaaaggttcaggtagtgaaaaagccttcaaaagaatgggcaaagcgtattcagcacgagtggaaagttctagaaaaagatttaccagataccatattcgtgagggcatatgaggatagaatggacctgcttagagctgttattacgggaccagcaggcactccctatcatgatggtctcttcttctttgacatttacttccctcctcattatccgagtgtacctccactggtgaactatcggtctggtgggttgcggcttaatccaaacttgtatgcttgcgggaaggtgtgccttagcctgttgaacacctggtctggtagtggatgtgagaggtggagtccttcaaactcaacaatgctacaagtcctggtctcagttcaggctttggtgttgaatgccaaaccttatttcaatgagcctggatatgccatgcatgctaatacacctcatggcgagaagagttcattaacttataatgaagatactttcctgctatcctgcaggacaatgctatattctctgcgaaatccaccaaagcattttgaggattttatcgccggtcatttccgcaagtatggccagagcatcctgatagcttgcagagcctatctggacggtgcccaagttggatgtcttgttggaaatggtgtgcaggatgtcgatgagggcgacaagagctgctcggcgaggtttaagagcgcgctgaagagattatttgaggaacttctgatggaattcactgtcaagggagcagagtgtgacaaattcctagctgagaaggccaaagccgcggcttctagagctccagcagacaccacattgaggctataa</cdnaseq> |
| Protein Sequence |
<aaseq>MATHAPKGYLCAGSSSFDDPDVVEVTPAAAAAGGWSSGHQKRKR SQVVPHEVIELDADDDPDGVVIIGEKSSVDKNKQAVGYPIDWLKHAKSSLAGEIAGPS SYPSKNPDILLGGLKIFQENPFYNNIDDYAYEAFEEDYGYDEDEYDDYDYDSTLYESE YNFTLASKFDGLDIPPGVEAPLPWLQTTAAEMANKTKPVNMMDDKIDEKYSAFKQFDT VDDHSDHYYSKPDLRKVQVVKKPSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLL RAVITGPAGTPYHDGLFFFDIYFPPHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLL NTWSGSGCERWSPSNSTMLQVLVSVQALVLNAKPYFNEPGYAMHANTPHGEKSSLTYN EDTFLLSCRTMLYSLRNPPKHFEDFIAGHFRKYGQSILIACRAYLDGAQVGCLVGNGV QDVDEGDKSCSARFKSALKRLFEELLMEFTVKGAECDKFLAEKAKAAASRAPADTTLR L</aaseq> |
| Gene Sequence |
<dnaseqindica>3775..4068#2878..3189#2653..2792#2430..2493#1912..2358#1692..1826#258..375#119..138#acccaaaccctccctttcctcccccaattctccatttctcctagctcgccggaaaccctaagcgggccacctcgcgccgcggcgggccggcgagcgatcgcattgggcggcggcggcgatggcgacccacgcccccaagtgagtcccccctccctccgccgatctgatcggccgcgcgcgccgctctttgttccattggaatttttgtttttgtttgtgacgtggtcgtggttggttgctgctctgggtgggggcaggggctacctctgcgcggggagctcgtcgttcgatgatcccgacgtggtcgaggtgacgccggcggcggccgcggcaggggggtggagctccggccaccagaagcggaagcggagtcaggtgatgtgggaaggcgcctcctctatctcacctttgtttgtggtgcatgattttattattttttttggtgatgttggaattgggaaccgtaggggggactggggcgcgtgattgctcgatgtgggaaggagggttggtgatcgttttaatggttgcgtgttgattccagttatgccatgacctgttattttggtgtggaattgcactagaattgtgtgggcagatgatctttgattgtgccaggaaatggttgagatggactggcagtggcagtttgatatattgaattttgatcttagatgcgctcaatgttgaatatcaagtggagtttgtgttttttttgtatggtgagaagttgggctgtttttgttagatgattgctgaattatagtttatgattgcagtactgaaatttttagagggtttgattgcattgaaatgcctgataaaccaagcaggagagaagcaatctagactgtctagactttagagtgacaccatgtttcagcctggttcatgatggactagaattcatgttgaaggaaatctagcatgggacatctttggttgggcttttgagtggtagtctagcattctctggcactgcttgagtaaaaatccttgtttgtttcttatctggagagttaggcatgtaaatgtgatgttggcatgtgcaatattttcagttccagagtggatgggcagactgaaagtgcatgccatttgattattctgtctgtctgttaggtcaattgttcaattatttgacatctttacctactacccaatattctggtttagacataatctgacatatgacgttggtagtagagactggaagctgtaagtacatgtcatctgattattccagcttagtctattgggttgtttggttctttgatgtctttctataactctaggattatgttttaacaatcatctaaaacttgtggttaatctagagatgcctcaagtgaaatttgtttgtttaaaggtgtcactgggccttctttttctttctgtaacatatgatattttgtgaccaaaagcccatctccatcaaccatcattgttggaaatcaagatagagttcagactccaaagaacataaagaggccaaatataaagatgaataattagtagtaaccatgtcagtttttattctatgaactcagcattgccgtgacgtttctggctttttcagccaccacgatttcctgtataggatcaattatttcccttcaaaacatttttgtaatatcatgttatgaaatgttaaatggtggggcttgagtttttttttatacgctgaataggttgttcctcatgaagtaattgaactggatgctgatgatgatcctgatggagttgtgattattggtgaaaaatcatcagttgataagaataagcaagctgttggatatcctatagactggctaaagcatgcaaaggtaagttttctcatgtcttctattttcattttcctttttcctataccacgtcagtttgacttattttctgtgggaacaactccagagtagtttggctggtgaaattgctggcccaagttcctacccatcaaaaaatcctgatatattacttggtggcctgaaaatatttcaagagaacccattttacaacaacattgatgactatgcttatgaggcatttgaagaagattatggttatgatgaagatgagtatgatgattacgattatgatagtacactttatgaaagtgaatataacttcactttggcttccaagtttgatggtttggatatcccacctggtgtggaggctcctttaccatggttgcagacgactgcggcagagatggcaaataagaccaaacctgtgaacatgatggatgataaaattgatgaaaaatacagtgcatttaagcaattcgatactgttgatgatcacagtgatcattattattcgaagccagatttaagaaaggttcaggtagtgaaaaaggtaaccttttttttgtaccctctgtatattccttttcttgttagttcgatactaagttttcccattgacagccttcaaaagaatgggcaaagcgtattcagcacgagtggaaagttctagaaaaagatttaccaggtagttttgttgcttcatatgctcttttttttatgaacagctaatggtacagtgtttatgctaagtgtcgtgcatgatgcgatcatgctgttgataagtactacattcatgaggtccttttatgattatttactttggatttttgtcctatatttacagataccatattcgtgagggcatatgaggatagaatggacctgcttagagctgttattacgggaccagcaggcactccctatcatgatggtctcttcttctttgacatttacttccctcctcattatccgagtgtacctccagtaagattttttttttgacttaaccagcatcgatgatgtttcactccatttttaagtatcttacaatagttagtaatctatgcagctggtgaactatcggtctggtgggttgcggcttaatccaaacttgtatgcttgcgggaaggtgtgccttagcctgttgaacacctggtctggtagtggatgtgagaggtggagtccttcaaactcaacaatgctacaagtcctggtctcagttcaggctttggtgttgaatgccaaaccttatttcaatgagcctggatatgccatgcatgctaatacacctcatggcgagaagagttcattaacttataatgaagatactttcctgctatcctgcaggacaatgctatattctctgcgaaatccaccaaaggtatggatatgactctgttcttatcctagtacatggagatgattacttattttcataatagtactaaagttgtttgatgaatatctagacatctactgtaaaatctctcttgtttgatgaatatttcatccattaaaggtctctttgcaatctcctctcgaaatatacatatttattgatgtttctcattttcgcactcgtatgttcctttcgtcaatattaattagtaataatttacacagttacactaactattctcaattattttgaagacattaacattgcgatcatctttaccattccttctactagtctttgttattattatagcatccataattaccatgcctaaccaaaatatgtcacaaaaggaaatggagtgattactatgggaagctattgttgtgcttatgtggttgcatgccatggattccccactatgaatagatatacctgtacatcttcttaacaatttatctttttgttgtggttcttttacagtggaaatatgtgttgtttagtttctgttattttggatccaatcttcacatctgcaaatttaatactaatgcattttttttgcagcattttgaggattttatcgccggtcatttccgcaagtatggccagagcatcctgatagcttgcagagcctatctggacggtgcccaagttggatgtcttgttggaaatggtgtgcaggatgtcgatgagggcgacaagagctgctcggcgaggtttaagagcgcgctgaagagattatttgaggaacttctgatggaattcactgtcaagggagcagagtgtgacaaattcctagctgagaaggccaaagccgcggcttctagagctccagcagacaccacattgaggctataagttgatagcctcgcgtggtcgatagacgggagtaataatttcgctattgaaataggatcctcaactcattatgcccccggattctaaccgtttcctggaagtagcctatgtaaatagccttgtagttgccccggtaaacataaacgacatatccgtgtttgtatttaggggctatatatcttttttccccatagcatgagggtgtcgtctacctgcggagccttaatccgctgtgtatgtgattgacgccacaccatcttggccttctgaagaatatcatattgaactcttatcagcagatccctgcttctacgctggaattcagctagaatgctagattatcagttggtttgtgc</dnaseqindica> |
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